FFCP PHASE1:Hg19::chr1:86047201..86047223,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3491 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2654 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=318bp_to_ENST00000480413_5end | |||
|coexpression_cluster_id=C4002 | |||
|description=CAGE_peak_2_at_CYR61_5end | |||
|id=chr1:86047201..86047223,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.36e-29!180;CL:0000222!1.12e-27!119;CL:0000220!1.13e-21!246;CL:0002321!1.58e-21!248;CL:0000680!3.57e-17!57;CL:0000056!3.57e-17!57;CL:0000355!3.57e-17!57;CL:0000183!8.88e-17!59;CL:0000192!9.85e-17!42;CL:0000514!9.85e-17!42;CL:0000187!2.06e-16!54;CL:0000393!2.18e-16!60;CL:0000211!2.18e-16!60;CL:0000359!1.48e-14!32;CL:0000057!3.52e-14!75;CL:0000548!5.03e-14!679;CL:0000004!5.03e-14!679;CL:0000255!5.03e-14!679;CL:0000012!2.67e-13!682;CL:0000144!1.01e-12!625;CL:0002371!2.19e-11!591;CL:0000213!8.70e-10!57;CL:0000215!8.70e-10!57;CL:0002078!2.84e-08!44;CL:0002139!2.62e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.25e-15;32!CL:0000192;1.47e-12;43!CL:0000187;3.08e-09;55!CL:0000134;3.33e-09;55!CL:0000723;1.81e-08;61!CL:0002139;3.61e-08;24!CL:0000393;8.61e-08;61!CL:0000211;8.61e-08;61!CL:0000048;1.02e-07;58!CL:0002078;8.21e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.86e-29,121;CL:0002321,5.83e-19,250;CL:0000192,3.75e-18,43;CL:0000514,3.75e-18,43;CL:0000680,8.47e-18,58;CL:0000056,8.47e-18,58;CL:0000355,8.47e-18,58;CL:0000359,5.34e-17,32;CL:0000187,6.78e-17,55;CL:0000393,2.75e-16,61;CL:0000211,2.75e-16,61;CL:0000057,1.53e-13,76;CL:0000213,5.88e-10,58;CL:0000215,5.88e-10,58;CL:0002078,2.13e-09,45;CL:0002139,4.01e-08,24;CL:0000048,5.43e-08,427;CL:0000723,1.15e-07,433;CL:0000115,2.92e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;1.47e-12;43!CL:0000355;1.08e-08;58!CL:0000222;1.04e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.34e-24!79;UBERON:0007798!9.34e-24!79;UBERON:0005256!3.79e-22!143;UBERON:0000055!4.36e-22!69;UBERON:0003914!8.76e-22!118;UBERON:0000486!9.78e-21!82;UBERON:0000914!1.19e-20!83;UBERON:0002329!1.19e-20!83;UBERON:0003077!1.19e-20!83;UBERON:0003059!1.19e-20!83;UBERON:0007282!1.19e-20!83;UBERON:0009618!1.19e-20!83;UBERON:0007285!1.19e-20!83;UBERON:0001981!2.60e-20!60;UBERON:0007500!2.60e-20!60;UBERON:0004537!2.60e-20!60;UBERON:0006965!2.60e-20!60;UBERON:0004290!4.62e-20!70;UBERON:0000490!1.50e-19!138;UBERON:0002100!3.02e-19!216;UBERON:0004872!4.50e-19!84;UBERON:0001637!1.92e-18!42;UBERON:0003509!1.92e-18!42;UBERON:0004572!1.92e-18!42;UBERON:0001134!2.18e-17!61;UBERON:0002036!2.18e-17!61;UBERON:0003082!2.18e-17!61;UBERON:0002385!7.21e-17!63;UBERON:0001015!7.21e-17!63;UBERON:0000383!7.21e-17!63;UBERON:0004535!2.45e-15!110;UBERON:0001009!2.84e-15!113;UBERON:0003104!7.30e-15!238;UBERON:0009142!7.30e-15!238;UBERON:0000119!3.30e-14!312;UBERON:0004573!6.01e-14!33;UBERON:0004571!6.01e-14!33;UBERON:0000483!9.48e-14!309;UBERON:0000475!7.06e-12!365;UBERON:0000468!1.77e-11!659;UBERON:0000477!6.90e-10!286;UBERON:0000481!1.00e-09!347;UBERON:0000467!2.42e-09!625;UBERON:0000926!3.35e-09!448;UBERON:0004120!3.35e-09!448;UBERON:0006603!3.35e-09!448;UBERON:0000480!3.78e-09!626;UBERON:0000947!9.44e-09!21;UBERON:0010191!9.44e-09!21;UBERON:0004923!1.34e-07!57;UBERON:0004111!1.44e-07!241;UBERON:0006914!1.80e-07!25;UBERON:0000487!5.61e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.69e-16;42!UBERON:0003509;7.69e-16;42!UBERON:0004572;7.69e-16;42!UBERON:0004573;1.55e-14;33!UBERON:0004571;1.55e-14;33!UBERON:0007500;1.21e-12;56!UBERON:0001981;1.21e-12;56!UBERON:0004537;1.21e-12;56!UBERON:0000055;2.93e-12;65!UBERON:0003914;4.64e-12;74!UBERON:0002049;8.42e-11;75!UBERON:0007798;8.42e-11;75!UBERON:0000947;1.27e-09;21!UBERON:0010191;1.27e-09;21!UBERON:0006914;6.94e-08;25!UBERON:0000487;1.24e-07;22!UBERON:0002385;3.67e-07;31!UBERON:0001015;3.67e-07;31!UBERON:0000383;3.67e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.45e-24,78;UBERON:0007798,1.45e-24,78;UBERON:0000055,1.94e-24,68;UBERON:0003914,9.68e-23,117;UBERON:0007503,3.10e-22,78;UBERON:0007500,4.40e-22,59;UBERON:0001981,4.40e-22,59;UBERON:0004537,4.40e-22,59;UBERON:0006965,4.40e-22,59;UBERON:0001637,1.28e-21,42;UBERON:0003509,1.28e-21,42;UBERON:0004572,1.28e-21,42;UBERON:0000490,2.51e-20,148;UBERON:0002329,3.16e-20,71;UBERON:0003059,3.16e-20,71;UBERON:0007282,3.16e-20,71;UBERON:0004290,3.16e-20,71;UBERON:0009618,3.16e-20,71;UBERON:0007524,3.56e-20,73;UBERON:0000486,3.95e-20,83;UBERON:0003077,1.31e-19,72;UBERON:0007285,1.31e-19,72;UBERON:0004872,2.86e-19,83;UBERON:0001134,1.16e-17,62;UBERON:0002036,1.16e-17,62;UBERON:0003082,1.16e-17,62;UBERON:0004535,2.03e-17,109;UBERON:0002385,2.50e-17,64;UBERON:0001015,2.50e-17,64;UBERON:0000383,2.50e-17,64;UBERON:0005256,6.04e-17,122;UBERON:0003104,2.18e-16,160;UBERON:0009142,2.18e-16,160;UBERON:0004573,2.83e-16,33;UBERON:0004571,2.83e-16,33;UBERON:0001009,3.40e-16,112;UBERON:0002100,1.33e-13,199;UBERON:0000119,6.07e-13,309;UBERON:0000483,1.84e-12,306;UBERON:0000947,4.20e-10,21;UBERON:0010191,4.20e-10,21;UBERON:0000926,9.17e-09,315;UBERON:0004120,9.17e-09,315;UBERON:0006603,9.17e-09,315;UBERON:0006914,6.15e-08,25;UBERON:0000487,9.99e-08,22;UBERON:0004111,5.46e-07,240 | |||
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| |||
|short_description=p2@CYR61 | |||
}} |
Revision as of 19:22, 10 January 2014
Short description: | p2@CYR61 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYR61_5end |
Coexpression cluster: | C4002_Smooth_Fibroblast_Renal_Hair_spindle_Alveolar_Chondrocyte |
Association with transcript: | 318bp_to_ENST00000480413_5end |
EntrezGene: | CYR61 |
HGNC: | 2654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.86e-29 | 121 |
embryonic cell | 5.83e-19 | 250 |
smooth muscle cell | 3.75e-18 | 43 |
smooth muscle myoblast | 3.75e-18 | 43 |
muscle precursor cell | 8.47e-18 | 58 |
myoblast | 8.47e-18 | 58 |
multi-potent skeletal muscle stem cell | 8.47e-18 | 58 |
vascular associated smooth muscle cell | 5.34e-17 | 32 |
muscle cell | 6.78e-17 | 55 |
electrically responsive cell | 2.75e-16 | 61 |
electrically active cell | 2.75e-16 | 61 |
fibroblast | 1.53e-13 | 76 |
lining cell | 5.88e-10 | 58 |
barrier cell | 5.88e-10 | 58 |
meso-epithelial cell | 2.13e-09 | 45 |
endothelial cell of vascular tree | 4.01e-08 | 24 |
multi fate stem cell | 5.43e-08 | 427 |
somatic stem cell | 1.15e-07 | 433 |
endothelial cell | 2.92e-07 | 36 |