FFCP PHASE1:Hg19::chr1:70671363..70671428,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9295 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10782 | |||
|TSSclassifier=strong | |||
|UniProt=Q05519,Q8IWE6,B4DTC1 | |||
|association_with_transcript=0bp_to_ENST00000370950,ENST00000370951,ENST00000405432,ENST00000454435,ENST00000463877,NM_001190987,NM_004768,uc001des.2,uc001det.2,uc009wbi.2,uc009wbj.1,uc010oqo.1_5end | |||
|description=CAGE_peak_1_at_SRSF11_5end | |||
|id=chr1:70671363..70671428,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.74e-11!57;UBERON:0005068!1.74e-11!57;UBERON:0006241!1.74e-11!57;UBERON:0007135!1.74e-11!57;UBERON:0001017!2.44e-11!82;UBERON:0003080!3.15e-11!42;UBERON:0002780!5.21e-11!41;UBERON:0001890!5.21e-11!41;UBERON:0006240!5.21e-11!41;UBERON:0000073!1.40e-10!94;UBERON:0001016!1.40e-10!94;UBERON:0005743!3.53e-10!86;UBERON:0000955!3.89e-10!69;UBERON:0006238!3.89e-10!69;UBERON:0002616!5.25e-10!59;UBERON:0002020!3.88e-09!34;UBERON:0003528!3.88e-09!34;UBERON:0000153!7.01e-09!129;UBERON:0007811!7.01e-09!129;UBERON:0001893!7.50e-09!34;UBERON:0002791!8.98e-09!33;UBERON:0000033!1.94e-08!123;UBERON:0000924!2.61e-08!173;UBERON:0006601!2.61e-08!173;UBERON:0001869!2.71e-08!32;UBERON:0002346!7.31e-08!90;UBERON:0004121!1.02e-07!169;UBERON:0003075!3.33e-07!86;UBERON:0007284!3.33e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.24e-08;34!UBERON:0002020;4.24e-08;34!UBERON:0002780;4.39e-08;41!UBERON:0001890;4.39e-08;41!UBERON:0002791;4.60e-08;32!UBERON:0001869;9.70e-08;32!UBERON:0001893;9.89e-08;34!UBERON:0000073;7.06e-07;53!UBERON:0002616;7.06e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.75e-11,89;UBERON:0001049,2.89e-11,56;UBERON:0005068,2.89e-11,56;UBERON:0006241,2.89e-11,56;UBERON:0007135,2.89e-11,56;UBERON:0001017,3.98e-11,81;UBERON:0002780,5.21e-11,41;UBERON:0001890,5.21e-11,41;UBERON:0003080,5.21e-11,41;UBERON:0006240,5.21e-11,41;UBERON:0000073,9.67e-11,53;UBERON:0002616,9.67e-11,53;UBERON:0000955,6.32e-10,68;UBERON:0006238,6.32e-10,68;UBERON:0003528,3.88e-09,34;UBERON:0002020,3.88e-09,34;UBERON:0001893,7.50e-09,34;UBERON:0002791,1.20e-08,32;UBERON:0001869,2.71e-08,32;UBERON:0004121,8.21e-08,171;UBERON:0000924,8.21e-08,171;UBERON:0006601,8.21e-08,171;UBERON:0002346,1.88e-07,86;UBERON:0003075,8.42e-07,82;UBERON:0007284,8.42e-07,82 | |||
|phase1_expression=44.5112029212864,28.9035707252827,42.4272756328873,37.0271203906583,29.499432232201,38.3828950604162,7.59899634504932,24.0053551902196,19.8501077431877,10.5665592695649,13.2582221914761,22.7179027015379,11.8695140202804,40.4715974179353,23.8606110524099,28.9099812974263,35.5589771534146,32.8639540674318,39.5225567020311,16.251979666136,13.8720470046092,8.77673220138646,57.2471974262113,47.4954255002908,48.9616294419731,46.8414177234941,46.0584306814196,43.8419051917193,32.649234978459,37.6152810135268,24.6157636072561,22.0661093874943,9.93979531968225,15.5296684270051,37.8039938831872,41.3712466538397,31.7088474481635,26.0377842009982,31.6860227002824,31.9005979952302,47.0222495903841,38.5433462562586,41.7272419567382,31.5514178151655,43.0778575805243,41.2392904019287,37.1886459049095,45.2284676824008,34.0677007984614,39.7015501404568,36.3748203271323,43.0397658397225,30.6823655855591,34.8561729135266,31.1480919166986,37.6484679085209,37.3881425579249,51.2369544534793,33.6692281607993,47.1765669801858,23.0161365287655,38.9224534220325,42.6852227310292,35.8028790447463,42.6607580784018,45.3908179752912,48.5801354216549,35.4260618012008,35.4608384525737,43.4377689410233,31.4807741369352,55.9782006701098,59.8113912263272,36.124653959342,29.339393395176,29.561869016681,36.7314623849039,38.5954614602671,51.4321877430656,32.4914527865023,35.407168541438,31.418234447517,26.3994366691984,31.6760394532036,33.8013516468151,30.7245760247885,32.432074949917,28.1628695577697,33.0522436392431,34.3459351632731,35.2912040847858,53.4385842327554,35.5514102156463,70.0508041468837,57.1718734241167,35.8202355294105,54.4886063215318,38.122043986669,31.6626308459244,48.4840836632967,42.6958169290003,41.1899590989218,37.0170783975031,49.0206010294764,38.2987679717288,41.8699060763044,49.0154993414678,30.8700080538877,35.5062018838468,38.4784696772602,37.0309023833037,43.4704628602579,42.1133839380252,60.7317679763649,43.9049199980903,46.9100678767924,38.705269853794,40.5480385669503,55.1582928602516,36.9535880615952,41.0182575929544,35.1667256445898,45.3231108424096,45.0512871263553,39.9778324967507,40.0153555954388,36.129631864526,41.3293823610701,33.6974646687219,38.0888182211761,36.5710299470943,24.1452309493309,31.9656404608826,34.6981586289184,24.5655576211586,36.7910158160492,38.1737254584528,29.1980922181582,52.8449627947139,37.9157269660984,41.809357989928,28.6189279962502,5.82872461268068,9.64039551239516,37.972045057598,38.8309314177366,31.2451207219333,48.1751061096791,45.7595928624102,68.7196377459695,29.4168362902724,21.5058648776531,23.952694610924,16.3939303157963,18.8774746294458,24.485505732666,23.8254261851964,51.6833518338658,53.7207056656932,61.5885927486993,19.7386365383482,19.0068026429628,20.5012128340462,36.0309818738951,17.012980905517,48.8469513713916,29.4133478140282,38.4005148448129,21.4643292452237,26.5794384679076,27.2970598456307,15.8136500923276,23.2668158488995,10.0301631992783,39.7577561356255,42.801112942628,106.456981373828,65.1119129099807,33.3388279266456,22.4271040056923,19.2148192313469,20.2267389702071,67.2215836463495,37.584277507443,40.8654757783647,28.3038389696022,25.9279166016,13.3563216145264,36.5227289891475,17.6846264678779,33.028158401948,50.4968344168189,49.8568668653845,43.1183976575903,50.8343886424684,41.3951649340658,54.5560124608042,51.0841228631283,34.3701031697194,11.8320977051943,7.18618141816238,52.5208675536687,50.4227635084016,73.9761188342768,38.6300306375137,34.0201453336912,37.4092766677426,34.5968158638064,87.3627525804758,41.8572482084392,45.9892225516249,60.3183103129649,56.9880486688567,83.9908160548751,38.7123061169707,94.6835223873504,49.6928726322113,82.2934104035813,53.7571408071028,66.5981754093505,90.5274460917367,45.1369400059828,35.9468455698234,41.3578225769455,42.821140932761,47.0359536437966,31.5911898875652,30.7469062505846,29.1646796602491,30.8909943945804,26.7460101928166,40.877464216493,17.2094485562798,37.9512153533802,16.5761905622977,36.6850663145263,28.8751792667834,23.0698260077696,30.6824135942145,22.4140257791638,21.9485005737464,22.005823853333,24.2016031493319,25.4831172422711,29.0407768385512,19.6221050042659,19.1920418202409,7.01208869017229,13.1703683626048,13.2307840246988,22.8159062679296,28.5019892836512,18.9052770138049,29.1365645613669,20.4160807981568,41.0047066613476,31.1690810560497,7.86812272803337,35.687785206129,50.0903488307645,19.8743066239298,7.27954349695705,30.3095818253074,43.821693080579,36.866329990048,23.0986316417718,25.9271887042902,29.8699019008319,1.58040879591855,6.00940313466411,36.4401169009348,30.4205544681009,30.0234947823231,31.8695035555042,53.5862988954362,48.061757965169,61.974497710371,51.1515731784573,17.6356032415997,109.371238812899,42.9676357984543,30.891889215575,34.4446688666538,39.0089119287514,39.051204989684,17.1894791501225,10.5495702489042,13.6857956818164,30.5397653328871,29.13327661086,40.5873534335421,22.9868722907989,24.4137638546637,41.5828080604787,45.7621873782533,3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| |||
|short_description=p1@SRSF11 | |||
}} |
Revision as of 19:03, 10 January 2014
Short description: | p1@SRSF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370950, ENST00000370951, ENST00000405432, ENST00000454435, ENST00000463877, NM_001190987, NM_004768, uc001des.2, uc001det.2, uc009wbi.2, uc009wbj.1, uc010oqo.1_5end |
EntrezGene: | SRSF11 |
HGNC: | 10782 |
UniProt: | Q05519Q8IWE6B4DTC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.75e-11 | 89 |
neural tube | 2.89e-11 | 56 |
neural rod | 2.89e-11 | 56 |
future spinal cord | 2.89e-11 | 56 |
neural keel | 2.89e-11 | 56 |
central nervous system | 3.98e-11 | 81 |
regional part of forebrain | 5.21e-11 | 41 |
forebrain | 5.21e-11 | 41 |
anterior neural tube | 5.21e-11 | 41 |
future forebrain | 5.21e-11 | 41 |
regional part of nervous system | 9.67e-11 | 53 |
regional part of brain | 9.67e-11 | 53 |
brain | 6.32e-10 | 68 |
future brain | 6.32e-10 | 68 |
brain grey matter | 3.88e-09 | 34 |
gray matter | 3.88e-09 | 34 |
telencephalon | 7.50e-09 | 34 |
regional part of telencephalon | 1.20e-08 | 32 |
cerebral hemisphere | 2.71e-08 | 32 |
ectoderm-derived structure | 8.21e-08 | 171 |
ectoderm | 8.21e-08 | 171 |
presumptive ectoderm | 8.21e-08 | 171 |
neurectoderm | 1.88e-07 | 86 |
neural plate | 8.42e-07 | 82 |
presumptive neural plate | 8.42e-07 | 82 |