FFCP PHASE1:Hg19::chr1:46008415..46008441,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_at_chr1:46008415..46008441,- | |||
|id=chr1:46008415..46008441,- | |||
|ontology_enrichment_celltype=CL:0002194!7.00e-39!63;CL:0000576!7.00e-39!63;CL:0000040!7.00e-39!63;CL:0000559!7.00e-39!63;CL:0002009!2.06e-37!65;CL:0000766!4.63e-35!76;CL:0000839!4.18e-34!70;CL:0000557!1.68e-33!71;CL:0000763!8.63e-24!112;CL:0000049!8.63e-24!112;CL:0002057!2.98e-20!42;CL:0002087!7.03e-19!119;CL:0000860!1.53e-18!45;CL:0000738!3.50e-18!140;CL:0002031!1.54e-16!124;CL:0000037!5.85e-15!172;CL:0000566!5.85e-15!172;CL:0002032!5.83e-14!165;CL:0000837!5.83e-14!165;CL:0000988!1.40e-13!182;CL:0000235!1.24e-10!10;CL:0002619!6.82e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.58e-61;6!CL:0002619;5.72e-31;3!CL:0000840;1.66e-15;5!CL:0000990;1.58e-10;8!CL:0000451;1.04e-08;10!CL:0000473;5.74e-08;39!CL:0000234;5.74e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.30e-61,6;CL:0002619,6.02e-31,3;CL:0002194,1.74e-22,59;CL:0000576,1.74e-22,59;CL:0000040,1.74e-22,59;CL:0000559,1.74e-22,59;CL:0002009,1.06e-21,61;CL:0000839,5.98e-20,66;CL:0000557,1.25e-19,67;CL:0000766,3.67e-18,72;CL:0000840,1.67e-15,5;CL:0001029,1.67e-15,5;CL:0000763,1.15e-13,108;CL:0000049,1.15e-13,108;CL:0002087,9.57e-11,115;CL:0000990,1.58e-10,8;CL:0002031,3.18e-10,120;CL:0000738,8.24e-09,136;CL:0000451,1.04e-08,10;CL:0002032,1.60e-08,161;CL:0000837,1.60e-08,161;CL:0000037,4.40e-08,168;CL:0000988,1.44e-07,177;CL:0000473,2.73e-07,48;CL:0000234,2.73e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.37e-34!115;UBERON:0002371!9.99e-29!80;UBERON:0002390!1.99e-28!102;UBERON:0003061!1.99e-28!102;UBERON:0002193!3.40e-28!112;UBERON:0001474!4.23e-26!86;UBERON:0004765!6.65e-21!101;UBERON:0001434!6.65e-21!101;UBERON:0003081!1.66e-10!216;UBERON:0002204!4.01e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.01e-11;1!UBERON:0006518;4.01e-11;1!UBERON:0008949;4.01e-11;1!UBERON:0000101;4.01e-11;1!UBERON:0002167;4.01e-11;1!UBERON:0002107;1.76e-08;19!UBERON:0006925;1.76e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.00e-17,76;UBERON:0001474,9.37e-16,82;UBERON:0004765,3.30e-14,90;UBERON:0002405,1.07e-13,93;UBERON:0002390,6.54e-13,98;UBERON:0003061,6.54e-13,98;UBERON:0001434,1.28e-12,100;UBERON:0002193,1.48e-11,108;UBERON:0002171,4.91e-11,1;UBERON:0006518,4.91e-11,1;UBERON:0008949,4.91e-11,1;UBERON:0000101,4.91e-11,1;UBERON:0002167,4.91e-11,1;UBERON:0002107,1.71e-08,19;UBERON:0006925,1.71e-08,19;UBERON:0008836,1.71e-08,19;UBERON:0008835,2.34e-07,22;UBERON:0003894,2.34e-07,22;UBERON:0009854,4.82e-07,23;UBERON:0002204,7.79e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,11.4196891862361,11.0123846446453,10.8181738406358,0.581592955118259,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0.709446689665756,0,0,0,0,0,0.224723484445085,0,0.641858054152187,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0.112328631146495,0.450530678524519,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,5.51730569212962,4.17911369518241,5.31831842075461,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,1.18157981336281,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.436011505254,24.3364435744807,17.2412148254925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,10.9461402577071,12.054170194371,21.0833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,2.19828350517124,2.65013777824443,0,0,0,0,0.320362237703084,0,2.07119527673598,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr1:46008415..46008441,- | |||
}} |
Revision as of 18:21, 10 January 2014
Short description: | p@chr1:46008415..46008441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:46008415..46008441, - |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.30e-61 | 6 |
adult endothelial progenitor cell | 6.02e-31 | 3 |
monopoietic cell | 1.74e-22 | 59 |
monocyte | 1.74e-22 | 59 |
monoblast | 1.74e-22 | 59 |
promonocyte | 1.74e-22 | 59 |
macrophage dendritic cell progenitor | 1.06e-21 | 61 |
myeloid lineage restricted progenitor cell | 5.98e-20 | 66 |
granulocyte monocyte progenitor cell | 1.25e-19 | 67 |
myeloid leukocyte | 3.67e-18 | 72 |
immature conventional dendritic cell | 1.67e-15 | 5 |
common dendritic progenitor | 1.67e-15 | 5 |
myeloid cell | 1.15e-13 | 108 |
common myeloid progenitor | 1.15e-13 | 108 |
nongranular leukocyte | 9.57e-11 | 115 |
conventional dendritic cell | 1.58e-10 | 8 |
hematopoietic lineage restricted progenitor cell | 3.18e-10 | 120 |
leukocyte | 8.24e-09 | 136 |
dendritic cell | 1.04e-08 | 10 |
hematopoietic oligopotent progenitor cell | 1.60e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-08 | 161 |
hematopoietic stem cell | 4.40e-08 | 168 |
hematopoietic cell | 1.44e-07 | 177 |
defensive cell | 2.73e-07 | 48 |
phagocyte | 2.73e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.00e-17 | 76 |
bone element | 9.37e-16 | 82 |
skeletal element | 3.30e-14 | 90 |
immune system | 1.07e-13 | 93 |
hematopoietic system | 6.54e-13 | 98 |
blood island | 6.54e-13 | 98 |
skeletal system | 1.28e-12 | 100 |
hemolymphoid system | 1.48e-11 | 108 |
lower lobe of right lung | 4.91e-11 | 1 |
right lung lobe | 4.91e-11 | 1 |
lower lobe of lung | 4.91e-11 | 1 |
lobe of lung | 4.91e-11 | 1 |
right lung | 4.91e-11 | 1 |
liver | 1.71e-08 | 19 |
digestive gland | 1.71e-08 | 19 |
liver bud | 1.71e-08 | 19 |
hepatic diverticulum | 2.34e-07 | 22 |
liver primordium | 2.34e-07 | 22 |
digestive tract diverticulum | 4.82e-07 | 23 |
musculoskeletal system | 7.79e-07 | 167 |