FFCP PHASE1:Hg19::chr1:44445593..44445621,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=925 | |||
|TSSclassifier=strong | |||
|UniProt=B4DE14,O60909 | |||
|association_with_transcript=0bp_to_NM_030587_5end | |||
|description=CAGE_peak_3_at_B4GALT2_5end | |||
|id=chr1:44445593..44445621,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.21e-21!679;CL:0000004!4.21e-21!679;CL:0000255!4.21e-21!679;CL:0000012!2.72e-20!682;CL:0000220!1.72e-18!246;CL:0002321!2.38e-18!248;CL:0000055!7.99e-16!180;CL:0000066!2.35e-14!254;CL:0000144!7.91e-13!625;CL:0002371!5.24e-12!591;CL:0000003!1.99e-11!722;CL:0000057!6.28e-11!75;CL:0000063!5.83e-08!578;CL:0000223!1.17e-07!59;CL:0000222!2.37e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.10e-11;13!CL:0002202;4.07e-07;9!CL:0002632;4.07e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,9.04e-12,13;CL:0002321,2.85e-10,250;CL:0002202,2.60e-07,9;CL:0002632,2.60e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.11e-13!238;UBERON:0009142!1.11e-13!238;UBERON:0003102!4.04e-12!95;UBERON:0004119!9.06e-12!169;UBERON:0000925!9.06e-12!169;UBERON:0006595!9.06e-12!169;UBERON:0000490!1.52e-11!138;UBERON:0005256!2.50e-11!143;UBERON:0002100!2.05e-10!216;UBERON:0000481!4.58e-10!347;UBERON:0000475!1.85e-09!365;UBERON:0000914!2.49e-09!83;UBERON:0002329!2.49e-09!83;UBERON:0003077!2.49e-09!83;UBERON:0003059!2.49e-09!83;UBERON:0007282!2.49e-09!83;UBERON:0009618!2.49e-09!83;UBERON:0007285!2.49e-09!83;UBERON:0001048!2.67e-09!168;UBERON:0003914!1.72e-08!118;UBERON:0000486!2.12e-08!82;UBERON:0001007!2.25e-08!155;UBERON:0001555!2.25e-08!155;UBERON:0007026!2.25e-08!155;UBERON:0004872!5.75e-08!84;UBERON:0000119!8.27e-08!312;UBERON:0000077!1.44e-07!130;UBERON:0000483!1.58e-07!309;UBERON:0001004!2.58e-07!72;UBERON:0002049!3.21e-07!79;UBERON:0007798!3.21e-07!79;UBERON:0004290!7.14e-07!70;UBERON:0000480!9.16e-07!626;UBERON:0001981!9.44e-07!60;UBERON:0007500!9.44e-07!60;UBERON:0004537!9.44e-07!60;UBERON:0006965!9.44e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.53e-09,83;UBERON:0003102,1.63e-09,99;UBERON:0000490,5.49e-08,148;UBERON:0005256,1.68e-07,122;UBERON:0001048,3.62e-07,160;UBERON:0004119,5.91e-07,160;UBERON:0000925,5.91e-07,160;UBERON:0006595,5.91e-07,160;UBERON:0000483,8.46e-07,306 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.140954404095971,0,0,0,0,1.26343974685366,0,1.72013755551056,11.8626198555313,1.52908960491121,0.527533956456907,0.247532705920093,0.331397375727916,0,1.20538905604795,0,0.975865597581014,0.738726348460727,1.63200552995402,0.626909442956176,0.286235987131057,0.273748850145768,0.753255837568817,0.0764134057479513,0.0821005894499457,0.314843125254717,0,0,0,2.75826367343678,2.71085326900425,2.58827807116751,0.309868802321207,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.383587685530591,0.722878304769133,1.00267582127178,0.869079113764942,0,0.486634870302636,0.378139268656271,0.221729397462564,0.087834785693126,0,5.82872461268068,1.85392221392215,0,0,0,0,0,0,0.79504962946682,0,1.38856200643038,0.56530794192401,0.838998872419812,1.6507082516404,0.835979866147242,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.446498641420399,0.22452937262617,0.675668882899933,4.5994991239765,2.84779697870439,1.28241220751285,0,0,3.05265836499774,0,1.01304409331664,0.794455084879313,0,1.41867352879343,2.24271040056923,3.20246987189115,0.74000264525148,0.622422070799533,0.404132016209064,0.817309515567294,0.302714855289863,0.576175924479999,1.64025002283658,0,1.1409436430889,0.298897361103602,0.704606991862589,1.13311061057692,1.26405726032024,0.408308342509787,0.859840221182376,0.413303124703062,1.18800285728205,0.741800787835671,0.910161361938026,0,0.505008341862199,1.00094815897571,1.38532057742091,3.07284334616587,1.5324389789951,1.05166641234618,1.36118619792025,0.538168907066586,0.85422955527427,1.05965950579781,1.80054657650641,0.92747276314595,0.257640540045629,0.37223371266318,1.85653965465393,1.26668106709558,0.252433774244115,0.184099797284599,0.646584227275248,0.710019185033229,0.604512589365842,2.54340888465731,2.12586938479627,3.27295344709002,1.72082757233402,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,3.12899064659632,1.28648187638577,2.76269842704961,0,0,1.53798840051797,1.85443159085912,0.723033089650446,1.32352767278873,1.08939722046203,1.42362371466658,0.943819157121151,0.196221465125346,0.769494313892781,0.738155454624648,4.20725321410337,0.4115740113314,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0,0.514703430895577,0.658501712451753,6.74410519545717,2.51322431029077,0.833296006426766,1.3032332212413,1.03993478527958,1.44331342025273,0.231860809950154,0.352226082707465,0.433099343283221,0.462985512576611,0,0,0,0,0,0.148631162288728,0.93733833986777,1.17587489739202,1.41775097242386,2.32852159027406,2.3250715081117,1.53353071666084,1.97065295158377,0,0,0,0,0.063497894292169,0,0,0,0.411309970813294,0,0,0.672786506072164,0.43596006883328,0.4400297149257,0.775630294546667,0,3.381211010224,0.797814349754612,0,2.57207374262142,2.83698264046557,2.1313774321288,0,0,4.11620168390384,1.62868092146868,0.355391948742546,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0.289562613335158,0.821905290201534,1.43248770591916,0.784596007954691,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.831883446123229,0.713715955188647,0.473107245101804,0.585707074963566,0.300946099727719,0,0,1.99267679560631,1.10621501125022,0.434418072340414,0.195801157462741,1.02943027143257,0,0,0,1.5156378572313,1.66435439510497,0.907170879989041,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0.804269605718038,2.96836132889982,1.23367755042124,0.710246901252508,0.410635780069046,0,1.27831416305955,0.241718899183244,0.40101294060657,0.920809889358963,1.03333003348146,0.546273504020151,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0,0,1.36074964221213,1.0795795805107,0,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,2.29706215198469,2.60024098414608,1.6068392984416,0.96670718292122,1.84858340537573,0.767518373630648,1.37836572484531,0.214840489736547,0.290033387828457,1.36362603865761,0.712256285173899,1.32227932288782,3.2672311452068,4.08360679982669,2.023155617111,1.39453664789186,0.62962469366128,1.3940745403212,1.23213432070436,2.12922412126809,0,1.11194531462352,0.429374660225974,1.48863347743867,0.316379424718726,0.38126038784765,1.02359116524534,0,0.318203247925937,2.35484592059769,0,0.274537029736055,0.471249609382746,1.01091240786658,1.58510321173008,0.421258456238981,0.48763373908959,0.974853958525138,2.11300293513511,0.272999822815972,0.282810863907425,0,0,1.32687795048244,1.75380354101505,0,0,1.01455188481352,1.8589409885985,2.53526042279017,0.286822704408103,0.589494246078727,0.7133421029625,0.354761064070598,0,0,2.27683904259429,1.39973888097993,2.02066436723575,1.34060455107157,14.1558280319719,0.0941438007767792,1.29151611801369,3.36942951335251,2.66058092122005,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0.371606350251437,0.144269212976445,0,0,0.997896857164083,0,0.211673582723883,0.324621940274555,0,0.228234679033192,3.91699739432558,0,0,0.481764225311099,0,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0.284136146806413,0.23874448473769,0.593929361665277,0.614321404198464,0,0,0.333926115068718,2.63686198762815,0.422250816255987,0,0,0.503865495708552,0,0.738508832766417,0.933118762985422,1.43789361835723,0.537063524026827,0,0,0,0,0,0,0,0,0.174919999992391,0.724999575434793,0.796554137998498,0,0.709163045303809,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,0.435753854075961,0,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.549585560411174,0,0,0.941881538370149,0.498635045700469,0,0.19606253431774,0.335643173951685,0.189753732724185,0.317873157960757,0.210998064528027,0,0.141353071433941,0.649165919226273,0,0,0.611030144933625,0.593042257361244,0.988511511572023,1.35748534357092,0.134802265961354,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0.063186579628488,1.50323419414493,0.103688191397247,0,0,0.313932918407225,2.38944859545918,0.284609546029793,0.277349346026277,0,2.15583274311631,0.435296032902013,0,0.171986032471617,0.580537987734511,0.219267951258557,0.492692742319255,0,0.176512253383001,0,0.959293472527256,1.19228767021794,0,0.195551382734803,0.320635281006135,0,0.39961921916426,0.288180834308212,0.114536596165916,0.514784993585894,0.576219191952599,0.372757606696298,0,0.407712618220842,0.418411385249333,0.713987523454252,2.31160471921215,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,2.52106183383116,2.22522817629149,1.81989568406299,0.393709926058995,0.677386656526276,0,0,0.482259445395058,0.550157746388935,0,0,0,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0.211200673038813,0.537862017998534,0.767660789277781,0,0,1.77987976358325,0,0.864221491201268,0,0,0.985110248992068,1.36310417428337,0.339936274560377,1.46552233678082,2.65013777824443,0,0,1.71086837884329,0,0.320362237703084,0,0,0.496166021811951,0.592834895693833,0.121792598380896,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0.1251909307065,0,0,0,0,0.999843263696853,0.151649117541648,0.570930667089935,0.235265819698172,0,0.28984205722165,0.447764408660622,1.8697064787778,0,0,0.50313580350515,0,1.14420034198462,0.302461847526478,0.466311601748341,0.295710299979268,2.23015474029183,1.34940933649081,0.465788870628778,0.414706207840855,0.265841714557995,0,0.300515217994437,0.380805212168795,0.813741466409323,0.363697318405119,2.04080058380728,0,0.796191777397232,0.400027764663154,1.03018711554838,1.01024846629776,0,2.31143796488764,0.857766365499703,1.04397716786085,1.13352962756136,0.926089897295336,0,0.358177682162975,0.308801447160972,0.877136198314828,0.176689145945881,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0,1.2288645437686,0.845248493434508,0,0.213383459388282,0.516644938982447,0,1.28874165176289,3.07734916982778,3.11038630016486,0.127894371303652,0.323474434190045,1.57265941855896,0.436838552768056,2.0367903594483,0,0.123935764259002,0,1.27201740261367,0.394308725006267,0,1.41070377476274,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,3.4351701475359,1.65157612686837,0.366857197043358,0.924205329202706,1.1441462864015,0.690359926060101,1.98916222116275,0,1.21023041222112,3.12605604493237,0.261906694481422,0.49131575253029,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0,0,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0.118193840883968,0.444925607568277,0.078493092850514,0,0.840816489941367,0,0,0,0,0,0.23248285073625,0.521574816907738,0.801711364730253,0.207216164163037,0.17071847709395,0,0.860454717640555,0.473328002922261,0.255640214277473,0,0,0,0,0.111855431797792,0.490751168076215,0.243835849964539,0,0,0,0,0,0,0.237840181555137,0.11294608203896,0.109940516745429,0.754814217833368,0.231522474323834,0,0.940634592723046,0.245148321753905,1.41405928260976,0,0,0,0.509781344063451,0.0939839179798536,0.128915775947154,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0.0679914901909147,0.436350690340377,0,2.60396512716726,0.462175628631418,1.29787968637137,0.252332849670158,0.109265571963696,0.126698501011437,0.101988829741982,0.26721740526556,0.551369397209069,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,1.56984607612859,0.12729431655633,0,0.217716747896961,0.342233301085281,0.26940821205835,0.286888821570705,0.332660356546013,1.46525883499754,2.7749109928206,0,0.898252021065869,0,0,0,0,0,0.641136984606466 | |||
|short_description=p3@B4GALT2 | |||
}} |
Revision as of 18:14, 10 January 2014
Short description: | p3@B4GALT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_B4GALT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_030587_5end |
EntrezGene: | B4GALT2 |
HGNC: | 925 |
UniProt: | B4DE14O60909 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 9.04e-12 | 13 |
embryonic cell | 2.85e-10 | 250 |
epithelial cell of tracheobronchial tree | 2.60e-07 | 9 |
epithelial cell of lower respiratory tract | 2.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.53e-09 | 83 |
surface structure | 1.63e-09 | 99 |
unilaminar epithelium | 5.49e-08 | 148 |
trunk mesenchyme | 1.68e-07 | 122 |
primordium | 3.62e-07 | 160 |
endoderm-derived structure | 5.91e-07 | 160 |
endoderm | 5.91e-07 | 160 |
presumptive endoderm | 5.91e-07 | 160 |
epithelium | 8.46e-07 | 306 |