FFCP PHASE1:Hg19::chr1:30996257..30996268,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C528 | |||
|description=CAGE_peak_at_chr1:30996257..30996268,+ | |||
|id=chr1:30996257..30996268,+ | |||
|ontology_enrichment_celltype=CL:0002621!5.73e-16!3;CL:0000244!2.59e-12!4;CL:0000731!2.59e-12!4;CL:0002166!4.29e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002166;3.93e-34;3!CL:0002159;1.14e-16;14!CL:0000317;1.21e-13;2!CL:1000448;1.21e-13;2!CL:0002308;1.21e-13;2!CL:0002140;1.21e-13;2!CL:0002621;1.01e-09;3!CL:0000244;1.80e-07;4!CL:0002594;1.80e-07;4!CL:0000731;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.94e-34,3;CL:0002159,1.02e-16,14;CL:0000317,9.40e-14,2;CL:1000448,9.40e-14,2;CL:0002308,9.40e-14,2;CL:0002140,9.40e-14,2;CL:0002621,1.01e-09,3;CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4;CL:0002594,1.92e-07,4;CL:0002077,2.83e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!5.73e-16!3;UBERON:0000365!6.12e-10!5;UBERON:0005910!2.37e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;6.73e-26;4!UBERON:0008895;6.73e-26;4!UBERON:0011159;6.01e-21;5!UBERON:0002419;1.21e-13;2!UBERON:0007771;1.21e-13;2!UBERON:0003297;1.21e-13;2!UBERON:0001821;1.21e-13;2!UBERON:0003487;1.21e-13;2!UBERON:0001820;1.21e-13;2!UBERON:0011137;4.41e-10;11!UBERON:0010323;4.41e-10;11!UBERON:0001949;1.01e-09;3!UBERON:0000486;2.77e-09;12!UBERON:0001310;1.80e-07;4!UBERON:0000075;3.24e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,6.73e-26,4;UBERON:0008895,6.73e-26,4;UBERON:0011159,6.01e-21,5;UBERON:0010188,1.22e-17,6;UBERON:0002539,1.22e-17,6;UBERON:0008816,1.22e-17,6;UBERON:0002419,9.40e-14,2;UBERON:0007771,9.40e-14,2;UBERON:0003297,9.40e-14,2;UBERON:0001821,9.40e-14,2;UBERON:0003487,9.40e-14,2;UBERON:0001820,9.40e-14,2;UBERON:0005089,9.40e-14,2;UBERON:0005088,9.40e-14,2;UBERON:0010323,4.42e-10,11;UBERON:0001949,1.01e-09,3;UBERON:0011137,4.04e-08,14;UBERON:0001310,1.92e-07,4;UBERON:0000075,3.24e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,12.5463215471784,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.40699917913613,10.4913571959366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,1.29964888536674,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21746226177622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0.406870733204662,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:30996257..30996268,+ | |||
}} |
Revision as of 17:29, 10 January 2014
Short description: | p@chr1:30996257..30996268, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:30996257..30996268, + |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.94e-34 | 3 |
general ecto-epithelial cell | 1.02e-16 | 14 |
sebum secreting cell | 9.40e-14 | 2 |
epithelial cell of sweat gland | 9.40e-14 | 2 |
epithelial cell of skin gland | 9.40e-14 | 2 |
acinar cell of sebaceous gland | 9.40e-14 | 2 |
gingival epithelial cell | 1.01e-09 | 3 |
transitional epithelial cell | 1.69e-07 | 4 |
urothelial cell | 1.69e-07 | 4 |
smooth muscle cell of the umbilical artery | 1.92e-07 | 4 |
ecto-epithelial cell | 2.83e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 6.73e-26 | 4 |
splanchnocranium | 6.73e-26 | 4 |
primary subdivision of cranial skeletal system | 6.01e-21 | 5 |
protuberance | 1.22e-17 | 6 |
pharyngeal arch | 1.22e-17 | 6 |
embryonic head | 1.22e-17 | 6 |
skin gland | 9.40e-14 | 2 |
epidermis gland | 9.40e-14 | 2 |
gland of integumental system | 9.40e-14 | 2 |
sebaceous gland | 9.40e-14 | 2 |
skin sebaceous gland | 9.40e-14 | 2 |
sweat gland | 9.40e-14 | 2 |
sweat gland placode | 9.40e-14 | 2 |
sebaceous gland placode | 9.40e-14 | 2 |
cranial skeletal system | 4.42e-10 | 11 |
gingival epithelium | 1.01e-09 | 3 |
axial skeletal system | 4.04e-08 | 14 |
umbilical artery | 1.92e-07 | 4 |
subdivision of skeletal system | 3.24e-07 | 16 |