FFCP PHASE1:Hg19::chr1:29063491..29063511,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000496288_5end | |||
|description=CAGE_peak_2_at_YTHDF2_5end | |||
|id=chr1:29063491..29063511,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.26e-19!53;CL:0000051!1.26e-19!53;CL:0000838!2.28e-19!52;CL:0000084!1.86e-10!25;CL:0000827!1.86e-10!25;CL:0000945!1.08e-08!24;CL:0000826!1.08e-08!24;CL:0000988!6.61e-08!182;CL:0000791!1.72e-07!18;CL:0000789!1.72e-07!18;CL:0002420!1.72e-07!18;CL:0002419!1.72e-07!18;CL:0000790!1.72e-07!18;CL:0000037!1.78e-07!172;CL:0000566!1.78e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.73e-11;53!CL:0000084;1.46e-10;25!CL:0000945;1.30e-08;24!CL:0000791;1.94e-07;18!CL:0000789;1.94e-07;18!CL:0002419;1.94e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.26e-19,53;CL:0000051,1.26e-19,53;CL:0000838,2.28e-19,52;CL:0000084,1.86e-10,25;CL:0000827,1.86e-10,25;CL:0000945,1.08e-08,24;CL:0000826,1.08e-08,24;CL:0000988,1.04e-07,177;CL:0000791,1.72e-07,18;CL:0000789,1.72e-07,18;CL:0002420,1.72e-07,18;CL:0002419,1.72e-07,18;CL:0000790,1.72e-07,18;CL:0000037,2.06e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.73e-11;53!CL:0000790;1.94e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!7.94e-11!51;DOID:0060083!7.94e-11!51;DOID:1240!1.24e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.72e-07;51!DOID:0060083;5.72e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.94e-11,51;DOID:0060083,7.94e-11,51;DOID:1240,1.24e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=7.26713517082227,6.20891519283851,6.20199378022273,5.00366491765652,4.46961094427288,10.4680622892044,5.06599756336621,3.15859936713415,4.70134130759709,5.16041266653169,2.79120467188971,8.73765488520689,6.85794143393979,6.18831764800233,7.62213964174206,10.7572023432284,9.64311244838363,7.30310090387373,10.2465887746006,6.89477925230012,7.75202626728161,7.8363680369522,8.30084362680065,7.66496780408152,10.5455817259634,10.0101561529816,10.0162719128934,12.515014228875,9.4407426443737,8.82807615623589,9.44378352228064,3.67768489791571,9.93979531968225,8.50434223383612,15.3385057148997,11.6578770639686,9.9824149373848,5.53995408531877,8.62341124121609,6.94434786290726,4.47830948479849,6.15397965436061,5.40908692031792,10.3232749533491,8.31327076115381,7.5201058968223,8.36744532860465,5.75635043230556,10.2203102395384,7.19230980805376,7.42866048934392,4.49316236788312,6.20542225325913,4.51839278508678,6.77132432971709,7.15320890261898,8.73299680185107,4.71919317334678,3.67300670845083,3.20929027076094,3.19668562899521,9.56568770541477,10.1726465387032,8.95071976118658,5.5139755339431,13.6172453925874,6.85104473895132,7.03496262718881,6.77927793946262,5.86409880703815,6.05399502633369,6.2607198117886,5.06339819905415,2.95757400836718,5.52771179909113,4.19317291016752,7.07670376222919,5.55654503513573,3.37523732063868,3.70516566863623,5.37075028437543,5.47992461293902,10.5597746676794,8.19207916893197,9.7846017924991,11.5217160092957,7.60752375368424,10.9202963591352,10.5767179645578,17.1729675816366,10.8150464130795,11.7447437874188,11.0859236156316,14.5388461436928,11.2101712596307,8.69167479757754,10.2289080459193,10.6112905942274,12.9528944369691,9.69681673265933,12.71096839871,14.203434172042,11.6896037044747,10.918224774747,10.0166008541445,13.2920336750173,5.68688113906533,11.7844014147621,11.4452225852693,12.4972807498794,14.3702009248641,9.85330491499179,12.307784742451,8.56130649887082,8.36284190439814,12.803955724825,6.89796888483458,9.27794102803101,7.08455137654608,11.4683549156675,14.9749194386976,11.4054245333805,14.0034860742329,9.08704939196371,9.99445812418767,8.52398107358461,12.3169199538157,14.9188989986302,14.1743303765259,11.7307767145067,2.43806866313962,9.38981203585091,8.56679164351653,3.2529523714611,5.51471701699479,6.51809335323707,10.3387173116643,10.2193322763554,8.60266836193017,6.65188192387692,9.39832206916449,5.82856885964821,5.46442932438813,7.41568885568859,3.8945687238562,5.92041106817509,5.05240249971688,22.1796280603968,18.3038371449641,21.5445350771148,10.5344075904354,7.74211135595512,13.1913390610886,7.34900324501212,5.87299210693868,13.7559020970034,9.61376846069329,9.04458657092651,8.89415656716776,10.7110596084694,6.44526907374635,1.52054421143703,9.03029612928227,15.8095124548724,7.29127753093584,8.8406731001239,9.20570427767296,8.67108399721581,13.7984973719295,6.6448596169769,10.0760959161724,5.27121669744253,3.87780264148325,5.66922267785295,6.95760732373446,5.57174251324151,6.22323149822128,6.3104056564739,5.32002573297536,10.0921968025615,9.60740961567345,7.15335890409764,7.78027588499416,11.5851177979932,7.02886183387873,7.41651395460164,7.49028701823999,7.73260725051529,3.1216007683032,6.27519003698894,5.67904986096844,7.51580791320095,9.38863077335163,9.41020404905065,7.14539599392126,5.89604723096486,6.09622108937016,11.8800285728205,7.66527480763526,4.55080680969013,7.90479955997862,6.39677233025452,7.63222971218981,7.75779523355712,6.14568669233173,8.88814607817157,8.41333129876942,6.4656344401212,8.9694817844431,6.19316427573846,6.78182083710598,9.30282397861647,8.14114980983667,9.53269998168828,4.83903826462134,6.75105328965065,5.84622030967192,10.0973509697646,8.46859067509154,5.17267381820198,9.58525899794859,4.93685281315437,8.13890843090341,7.15065156704198,7.0913991353617,8.89094245705912,9.51394907810844,9.80720285578991,9.64409725817003,10.2624444465217,11.6067591402789,9.12443397689575,9.38697193978896,5.78916844373597,9.66944449467364,3.71494342425583,5.77503585335668,6.50687400219141,5.22612539242115,5.78426471720357,7.279402200338,5.01122721412534,6.40630671599961,5.12358971008625,5.69042248863504,6.15595451114225,10.3341763647451,7.01208869017229,5.3504621473082,2.94017422771084,10.1404027857465,9.82827216677626,8.27105869353966,13.6853560818542,3.07471096357784,6.00487336044839,8.67027254728142,3.37205259772859,5.93120937228622,4.81459914824354,7.81939932744779,7.27954349695705,8.6598805215164,9.27443239800615,6.34006948873437,8.95071976118658,16.667478452758,11.4152491340759,4.74122638775565,2.57545848628462,6.64785916435973,4.91408956792399,5.64798416697167,5.62403003920662,7.55919576894868,5.52922879245307,9.67232045190762,6.97521452433509,8.43441894163465,6.89728533054321,6.25143881493905,4.76854665743776,2.73827911492227,6.9433338384509,9.39768835524102,6.875791660049,9.37739577680376,5.13217338068116,9.56295682140909,13.8157806608202,11.4330573052231,6.16720963899484,6.97536110133248,8.43390286940925,7.88557466122444,3.57656445851882,5.071816515336,4.5209479819428,3.12022310734098,6.68739173081569,4.25547396069835,6.39413229638638,4.86125178437702,2.71310802695722,2.46972101034231,5.86325131728723,6.04166312862328,4.75171123760058,6.02878754119172,5.22920075160176,7.49797433865428,8.51366464488333,5.52482800575339,12.6500363689819,4.55287225434007,8.04033550838797,25.6746429073293,4.05387658669222,6.1642896765115,8.2368043090352,11.5447698313333,12.8069994131253,12.075144192133,15.1444782810103,10.417879593121,13.0139853857622,20.1055091322201,13.4013012267479,19.1381625495949,2.24702107184155,2.99161459204025,0.828831026872071,6.99341502799097,6.5022167737758,8.4092157346918,9.15071790735551,7.31558854068363,8.98903765693428,7.84847480451178,5.11608369537122,4.5481500811197,7.24311499047534,17.2698655619213,6.82165923604302,4.60483156680839,6.06983588134496,7.89229874764969,8.06395301879261,9.27571063520052,12.8073069364133,3.94065842880137,9.98612637062982,6.95497674658265,4.96215615637554,7.366174717827,7.29716245525991,6.40695746278505,8.18731598506726,4.82561763430822,4.45254199334973,7.55627499633012,6.92490728721196,6.48804532509092,4.67328986265259,7.78609535681727,3.86750238693191,6.81721999031168,4.60404944679482,5.74072240823034,3.82391452814106,3.54035920390445,6.31679458070376,7.70153371044148,3.92174884588428,4.38417673959782,8.97188845589443,10.2360045663807,9.35515379020836,6.69339339916632,13.880452742126,7.31555381368403,7.5253466078228,5.60727800699084,0.831076008928724,8.50724067944278,7.23557592931584,5.49014447152291,7.94995387860806,8.52838078819235,11.0628654185863,6.90374778039739,28.1118256992314,24.0927739768117,9.76251414593493,6.50060246036521,8.03419649220798,7.54031602678551,7.08623638727364,7.36817638685422,4.68644346447404,6.23037420235987,5.94568445048337,7.24426333036858,9.08126763596721,4.29740779938543,7.49541262723914,7.78437546216963,6.4740979747552,6.507837690162,5.66662224295152,6.2733354314454,13.2454439475718,4.7907542728532,6.95946393660058,7.4129687641568,5.86812035642164,5.21021717103534,6.01120906965579,4.38449446024797,5.11795582622668,5.99114583247489,6.36406495851874,8.63443504219153,4.67668389716618,5.4907405947211,5.77280771493864,6.2676569287728,3.17020642346017,13.4802705996474,5.85160486907508,7.31140468893853,7.39551027297288,7.6439950388472,4.66637925447252,2.26016233240486,6.06501877900737,5.30751180192976,15.7842318691355,2.31510213706675,5.9030527684197,7.50768394762005,6.50629346009475,12.3946065114186,6.45351084918232,7.17217999395784,6.06340787518125,6.03093808920016,7.17765960012058,4.28083360847872,8.72788299661145,8.74836800612457,6.06199310170726,10.0545341330368,13.0669181833587,5.55448424582997,5.59656984472599,3.36942951335251,5.76459199597678,4.59446800413919,12.1787426215721,5.35246044999663,5.12682468456746,10.9586616710583,6.17043409629291,8.43015304550532,8.10047155857172,5.55187623405989,10.3619348993649,8.66231869737023,5.88096518354476,10.0333714567888,10.5316525472805,15.7934892233479,12.1163967273905,8.58191297161111,10.3412899871478,8.89029047440308,9.08941432768755,12.9166701932191,11.6399686306928,9.87083343370047,17.5444133963047,12.0197162239138,8.18999183028868,9.48458623797924,5.96184732766457,8.93113896364988,6.45205605047762,8.94704431569664,7.67506051874779,6.83858333907141,10.0226222602287,6.15436994738562,8.38412603275548,13.9890226559084,11.278960407028,3.7428108081644,7.47191714286659,7.16027078322129,12.1473288862451,6.5351313765475,7.63982351160608,8.01804638248124,3.68592842519078,3.97659059106519,6.18945432206256,4.45234820091624,12.360290567007,9.92289418201569,3.98495976502139,8.01223355040328,5.79445320064835,7.05653909264868,7.63125793858631,4.66559381492711,7.54894149637545,6.62378346299754,6.13886844272246,2.95930216910801,11.974154617347,3.33410970433911,6.78532922266653,6.02992638052033,11.9768278800717,5.20855522170466,5.07267999977935,13.0499923578263,5.68967241427498,11.1871606128817,6.14607972596635,9.30807107751954,10.4977660817972,7.98674976693144,5.31444831488303,6.27101480852121,10.6807215421958,8.29344449484185,11.2308095202348,3.72955175161753,9.80446171670912,5.99522100397994,5.2326175782582,6.60863923912607,6.9169171316418,8.52697621892835,11.6252687956549,7.97502899329799,7.7857954391583,4.26427820814908,14.3070617474031,10.8316376912567,16.4549565081155,6.54227415789824,10.7834393874757,8.22325776181629,5.50285824900137,14.6221652661948,8.01792645206503,6.03961390188847,3.1097675715467,7.57360239097319,7.96209544862804,5.48436899920703,10.9985426088053,14.5295353053505,9.76155117677373,9.71124130400735,3.90926571287927,6.42062117839031,4.68528891450678,9.85255861764596,3.91329237864179,5.82672910881823,8.68085686268659,12.0990716048664,7.34574627913176,3.85438135733777,11.5749032949159,7.46554978060179,4.6525771089503,5.29587129400798,4.08112793929393,5.97362148864794,6.54601955868523,9.56855243790657,2.95051555169723,10.2892017285097,6.18120366720858,8.03742673913339,4.64362287673365,7.35348117797047,6.65112785484289,8.62212299058697,5.52837393983991,5.20711147479852,8.3612874088797,8.0854735541583,6.35886757449567,6.33107959558787,5.47543871657448,4.08809983282822,3.84215390530835,10.3900996982708,7.34861127485941,9.85014727026875,17.6742847797824,8.06706868733638,5.3428590293136,8.01359717697104,5.30026403687095,4.18411385249333,8.56785028145103,10.9801224162577,5.4037825983881,4.65478288232776,3.83239764200917,6.0167161798794,9.20105739977601,4.74780082162832,4.12488763221031,2.87149209830726,5.99037001496973,4.72148652950228,5.80245789348869,7.86046628094697,7.92659743793288,17.4743924291181,10.556946429168,9.39540785545297,10.0431280342735,5.80722140937018,10.1607998478941,7.95229689809303,5.0395260261283,7.07313853246084,4.40126197111148,4.56984371832104,6.97419063809651,6.96421759102155,5.34596098590617,11.7402140659743,5.20117668174708,8.1829157490597,6.86402187376142,5.55790751931819,8.0604382874167,5.71756261098694,3.31045985182716,6.35671344136875,4.88699641578341,5.18532894720761,6.85833456229759,16.7622268187482,10.179472572918,5.79319274070434,7.81853431488867,5.42243264608905,3.97520666736664,4.78346938537737,3.9669780522807,4.27717094710824,0.704815022316672,2.88326013932776,6.13096789888697,8.28478110694391,14.8849806543585,16.2041538156314,13.5189784202794,10.8518013820931,2.1760712134779,6.0165574565448,4.90152922821539,3.27872630709804,8.48092119751265,6.2024772597689,5.61320818549031,5.88397374320549,5.73409195690071,6.10109783452688,5.34029065295898,13.5581662237506,9.99843263696853,17.4396485172895,5.42384133735438,7.29324041064332,20.1384009496959,32.4623104088248,5.52242770681434,7.47882591511118,7.21247619953397,7.19731420045339,6.54076544556695,8.00830099436882,5.49216164152617,6.35169879805604,4.81855321806619,6.65348174953353,5.89398038505699,7.19684979461767,5.58946644754534,7.05000553329454,6.38020114939188,7.30443086536427,7.06210762286927,7.23529903120711,5.69619026486526,7.27394636810238,9.02248679156903,12.5289115167193,8.36001366267094,5.200360940621,5.83772698810748,6.73498977531838,12.6184898228651,5.20073542099719,12.2231707083708,5.48088013126944,7.70800146741726,11.5761237161917,11.502625111804,11.2825969881337,3.08801447160972,6.57852148736121,3.88716121080938,8.68113172219117,6.08192786351062,4.61234733458304,4.49059444250558,8.81193872914408,5.94511275452442,2.33832370607266,5.71318813347461,7.52400813576883,10.4835151630852,8.8478247151339,4.43755459053117,11.399281563731,6.50819551134259,11.7106186169355,4.54012762853469,11.598674865866,4.89578277018056,5.59869534029676,10.1036553329885,6.25383906100754,12.4240094066158,10.0472867136653,13.408869866368,13.8173698066094,9.79092537646117,10.6142534414916,6.67809136372179,11.3560912801805,8.80627823114017,6.34816698643231,7.65613693383001,4.17489963126987,4.25089728976755,5.10828348982884,5.74325819874114,11.595298026199,6.84656799395757,5.81312324274664,2.85538840518309,5.69256767305949,4.24691004051865,11.5560017068658,5.89180897366725,8.00902400481051,4.1421595563606,12.5317219933253,6.09203659628984,6.45456219851264,11.7227101684964,11.0000811682197,7.04219245293416,4.28782650029431,7.42913430802341,2.34323429584154,4.54710952302605,6.4684126397785,11.4864709893826,9.3203820365721,5.95453414067153,4.74852359770976,4.34392253974624,8.0355275381743,9.07966049990825,4.24875922965642,5.91921697513374,5.14473746943305,14.5194824320282,6.85952037749674,5.98133650196119,6.44573180915921,4.25497827182286,5.45033869271139,5.10205103528341,5.02769887731206,5.88571542958957,9.13158720509496,6.0459725541214,2.8665101273223,6.43288897589907,13.273143385549,7.55569264892814,5.73732298598512,5.61197955311177,7.45978190986933,9.2187977630733,4.83881763269864,7.744092458765,4.49661602776148,4.34588364271704,5.50403165248208,6.18588545068935,6.51433409895072,5.7332336338646,5.70462702168741,9.8150233615243,6.94932172398936,4.53200186031526,4.61982630853112,12.7579587447202,4.85710993059139,12.1648521000295,14.3244558116185,9.75144744376062,12.0852307781687,9.56482495685233,17.8136155408675,4.39892701215285,9.83518022267808,6.58444214906132,3.43207650455468,6.3632667717439,3.33724394095407,3.56455680392503,6.7624916413344,7.98657439032739,9.96229530586448,9.15302009224796,8.9947040332436,3.21397089490184,3.88184358887261,12.4374118368211,2.19100916473955,7.79839781787719,3.15347082933193,6.62640561211375,5.37132772508226,10.0360658778287,7.93540260773101,6.32391530883477,4.62175628631418,6.05677186973305,6.68682051625918,10.4894949085148,9.88248307889208,8.05711754961656,8.01652215796681,13.1409706334828,3.50990555009325,6.66852544320507,11.2544934665595,2.48750831837634,4.03388683861391,5.33084954752452,9.9987061214771,16.5993498278536,13.4702130022012,6.95217547999803,6.87389309404181,5.2550469129137,6.96693593270276,7.87136592496146,7.61078199064839,4.80538776130932,7.98384855710432,9.84979550192791,6.29691340678521,7.7228912914776,2.60493086109102,11.7320471201727,5.01189921149752,8.95171592294625,7.98908129022615,12.0764276154616,9.61705476909699 | |||
|short_description=p2@YTHDF2 | |||
}} |
Revision as of 17:27, 10 January 2014
Short description: | p2@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YTHDF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000496288_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.26e-19 | 53 |
common lymphoid progenitor | 1.26e-19 | 53 |
lymphoid lineage restricted progenitor cell | 2.28e-19 | 52 |
T cell | 1.86e-10 | 25 |
pro-T cell | 1.86e-10 | 25 |
lymphocyte of B lineage | 1.08e-08 | 24 |
pro-B cell | 1.08e-08 | 24 |
hematopoietic cell | 1.04e-07 | 177 |
mature alpha-beta T cell | 1.72e-07 | 18 |
alpha-beta T cell | 1.72e-07 | 18 |
immature T cell | 1.72e-07 | 18 |
mature T cell | 1.72e-07 | 18 |
immature alpha-beta T cell | 1.72e-07 | 18 |
hematopoietic stem cell | 2.06e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.94e-11 | 51 |
immune system cancer | 7.94e-11 | 51 |
leukemia | 1.24e-07 | 39 |