FFCP PHASE1:Hg19::chr1:27998692..27998710,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2537 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4054 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000362020_5end | |||
|coexpression_cluster_id=C1244 | |||
|description=CAGE_peak_1_at_IFI6_5end | |||
|id=chr1:27998692..27998710,- | |||
|ontology_enrichment_celltype=CL:0002057!9.56e-14!42;CL:0000766!1.68e-11!76;CL:0002194!2.93e-11!63;CL:0000576!2.93e-11!63;CL:0000040!2.93e-11!63;CL:0000559!2.93e-11!63;CL:0000860!2.93e-11!45;CL:0002009!6.23e-10!65;CL:0000839!1.28e-08!70;CL:0000557!5.15e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.07e-11;39!CL:0000234;3.07e-11;39!CL:0000860;1.17e-10;33!CL:0002057;1.17e-10;33!CL:0000576;3.85e-08;48!CL:0000766;8.36e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.16e-16,48;CL:0000234,2.16e-16,48;CL:0000860,9.56e-14,42;CL:0002057,9.56e-14,42;CL:0000766,4.21e-13,72;CL:0002194,4.62e-13,59;CL:0000576,4.62e-13,59;CL:0000040,4.62e-13,59;CL:0000559,4.62e-13,59;CL:0002009,1.55e-11,61;CL:0000839,5.49e-10,66;CL:0000557,2.68e-09,67 | |||
|ontology_enrichment_development_v019=CL:0002057;4.01e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.50e-08!102;UBERON:0003061!2.50e-08!102;UBERON:0002193!3.06e-08!112;UBERON:0002371!7.03e-08!80;UBERON:0001474!1.57e-07!86;UBERON:0004765!5.15e-07!101;UBERON:0001434!5.15e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.25e-09,93;UBERON:0002390,2.29e-09,98;UBERON:0003061,2.29e-09,98;UBERON:0002193,3.27e-09,108;UBERON:0002371,4.76e-09,76;UBERON:0001474,1.31e-08,82;UBERON:0004765,1.73e-08,90;UBERON:0001434,1.28e-07,100 | |||
|phase1_expression=204.569855058647,180.70084216399,279.794492130503,350.256544235956,576.579811811201,469.318125965998,430.609792886128,195.201440888891,162.1962751121,33.6655493007067,83.0383389887189,37.1350332621293,57.2374342755744,49.0114757721785,51.3665932378269,113.62294975035,31.3401154572468,43.8186054232424,40.4984222996121,136.541253407158,87.108295161296,174.280825141817,83.2946722551375,29.564875815743,70.3038781730896,86.5763887124288,70.1139033902537,56.7504733271627,450.795461268844,201.126604602939,211.788456696392,44.1322187749885,12.9518545074648,10.3531122846701,24.0148321798935,12.2265539939183,171.462656571551,199.438347071476,86.4346568596311,271.263588394815,388.941178754749,384.461781564529,69.8029788288646,145.107442302006,195.739738830803,196.007921439755,203.375407292474,171.04584141708,284.6201548526,481.021679962636,320.713204574434,742.554201850158,271.314850739719,202.036705961738,304.709594837269,204.242938403726,219.14363849645,381.355753103309,597.475757908002,412.39379979278,467.355438959099,388.564831619952,327.319862157098,471.830798839692,765.862180740833,345.537601836904,531.890200642221,358.280596656116,345.221691994173,629.630460800133,1287.07934259854,672.106685677306,1017.74303800988,423.355593769131,417.34224083138,562.723804544481,362.259835447447,334.143586572352,281.751953479981,319.784298477681,296.385849026644,314.18234447517,59.8387231168497,49.698613624854,58.7076107549946,69.5570262783407,34.4340548850971,46.5549476363131,60.8161282962073,41.0243114450207,19.3532409497212,30.5363338472888,35.5514102156463,74.0159440042545,125.553918107864,69.7967824653954,65.1109339076787,70.7419372948496,80.1845846098086,161.000595061223,141.450263718978,136.352968051603,142.223511737775,184.829947972503,158.792584128937,196.057496706505,174.668492128435,163.18834133051,271.954095747705,247.643484333136,192.33961237895,158.522287897074,148.731422851547,109.691739516782,125.442628565972,124.413658281928,151.372094972759,141.918134984326,121.9554915534,81.5527460669688,104.824436070883,115.955149422702,109.016386212307,126.066811987102,147.418257331768,93.2902373053426,102.640999615131,87.9005400459833,71.4065322741965,80.9568417704846,68.2659225679093,48.9611627583654,62.1412050559557,177.105184668437,47.6271015104095,162.228101236123,466.037564971944,314.852761085805,45.4712470559166,32.8159508244595,39.7891579189861,1455.11203924184,87.0665739019176,35.5953065073052,89.5750806486926,92.9852797178087,357.258039914191,15.0249093312365,128.126860014749,8.17206502925043,20.4725279587706,67.9585330133838,27.7712401286075,39.5715559346807,72.9929019005236,46.2198310459313,73.7752231874941,81.9181126566773,277.853451158321,54.2247392678766,247.337200705016,40.2944216030812,226.977713519798,26.4717417849025,989.183318363628,44.6498641420399,21.7793491447385,28.0402586403472,6.13266549863533,14.2389848935219,22.5338145034401,523.168257221171,325.735421884593,35.3236182235453,96.4125586288918,61.7956896923149,36.8097522660748,215.12746556161,113.493882303474,33.0799784083961,35.2271685908026,2332.48833783266,56.6404084427575,30.4446118877495,35.7981567818475,109.58277761493,48.9749535807999,98.4150013701946,31.8403278366927,24.5302883264113,42.8917713183669,12.9177948508141,13.7592002712912,11.7978677629889,44.5056093335667,29.7259047894478,48.5631171526098,6692.02009506981,3065.36812226627,66.4417794214759,171.749735894081,23.5670559535693,12.7620890269403,29.3687962413234,42.5808292254413,57.9261934060147,2723.66576991769,26.3162664931249,50.0497083571925,153.761319949369,87.7398070800586,68.1206788111593,69.6635097651847,52.5586701693083,111.483996942622,45.9071623696244,57.877581065752,35.8455959426643,112.48497614089,188.156010137097,83.0722446488878,44.532427416617,46.6291628853841,70.7334722577666,360.024879179902,38.4318157821265,6.95250124938694,10.9999707706833,11.1546185154738,41.4644220061482,15.1392510525377,8.39447925874409,2149.61657421167,1316.71420048084,120.177381576658,162.993142739225,617.928836309165,317.298837706861,358.916805176279,334.041287418506,341.359845606759,332.266152240919,344.754209568423,376.044518458699,408.14064746072,401.676031852032,98.9128309197029,110.791001304722,80.256932209623,205.812195939759,86.193423678845,90.4201039343416,40.7645035610169,126.25844643259,177.103351502084,24.5341968726892,39.0711016054707,48.3327539007764,1015.04103444024,53.8864750822642,1657.38684911362,72.7954349695705,15.8764476227801,60.399740992015,85.1213033209707,339.694251581807,244.919336153027,70.9647987835051,463.059777204135,419.799733264393,1667.13534821777,1464.63269550649,582.188262684949,98.4205256861158,2581.21338190368,1331.26816310601,25.4346204476089,11.3347236020445,21.852812712417,37.9350693179876,201.718962324301,47.6854665743776,27.6710310560566,41.533760597279,589.323956925621,1200.97160995522,1682.07036746417,369.516483409043,55.0127085962781,870.994867747361,4607.80792043755,25.5658872307422,47.5196475028275,21.9281474604641,203.990767465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584 | |||
|short_description=p1@IFI6 | |||
}} |
Revision as of 17:22, 10 January 2014
Short description: | p1@IFI6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFI6_5end |
Coexpression cluster: | C1244_Smooth_mesenchymal_Fibroblast_mesothelioma_gall_Melanocyte_meningioma |
Association with transcript: | 0bp_to_ENST00000362020_5end |
EntrezGene: | IFI6 |
HGNC: | 4054 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.16e-16 | 48 |
phagocyte | 2.16e-16 | 48 |
classical monocyte | 9.56e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.56e-14 | 42 |
myeloid leukocyte | 4.21e-13 | 72 |
monopoietic cell | 4.62e-13 | 59 |
monocyte | 4.62e-13 | 59 |
monoblast | 4.62e-13 | 59 |
promonocyte | 4.62e-13 | 59 |
macrophage dendritic cell progenitor | 1.55e-11 | 61 |
myeloid lineage restricted progenitor cell | 5.49e-10 | 66 |
granulocyte monocyte progenitor cell | 2.68e-09 | 67 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.25e-09 | 93 |
hematopoietic system | 2.29e-09 | 98 |
blood island | 2.29e-09 | 98 |
hemolymphoid system | 3.27e-09 | 108 |
bone marrow | 4.76e-09 | 76 |
bone element | 1.31e-08 | 82 |
skeletal element | 1.73e-08 | 90 |
skeletal system | 1.28e-07 | 100 |