FFCP PHASE1:Hg19::chr1:245134406..245134424,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1656 | |||
|description=CAGE_peak_at_chr1:245134406..245134424,+ | |||
|id=chr1:245134406..245134424,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.63e-37!172;CL:0000566!6.63e-37!172;CL:0000738!6.92e-37!140;CL:0000988!6.32e-36!182;CL:0002032!3.56e-33!165;CL:0000837!3.56e-33!165;CL:0002087!3.44e-32!119;CL:0002031!4.16e-31!124;CL:0000860!5.81e-20!45;CL:0002057!2.08e-19!42;CL:0000766!2.93e-18!76;CL:0000763!3.11e-18!112;CL:0000049!3.11e-18!112;CL:0000557!6.90e-18!71;CL:0002009!3.76e-17!65;CL:0002194!6.27e-16!63;CL:0000576!6.27e-16!63;CL:0000040!6.27e-16!63;CL:0000559!6.27e-16!63;CL:0000839!1.12e-15!70;CL:0000542!2.82e-14!53;CL:0000051!2.82e-14!53;CL:0000838!5.39e-14!52;CL:0002393!1.58e-08!9;CL:0002397!1.58e-08!9;CL:0002320!3.61e-08!365;CL:0000134!6.32e-08!358;CL:0000084!8.18e-08!25;CL:0000827!8.18e-08!25;CL:0000791!1.29e-07!18;CL:0000789!1.29e-07!18;CL:0002420!1.29e-07!18;CL:0002419!1.29e-07!18;CL:0000790!1.29e-07!18;CL:0000219!3.83e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002393;5.46e-17;6!CL:0002397;5.46e-17;6!CL:0000576;4.49e-13;48!CL:0000766;5.41e-13;69!CL:0000791;1.69e-12;18!CL:0000789;1.69e-12;18!CL:0002419;1.69e-12;18!CL:0000624;6.86e-11;6!CL:0000875;3.50e-09;3!CL:0002396;3.50e-09;3!CL:0000623;4.33e-09;3!CL:0000767;6.10e-09;3!CL:0002087;9.53e-09;104!CL:0000084;2.14e-08;25!CL:0000226;4.48e-08;3!CL:0000842;4.48e-08;3!CL:0000094;7.45e-08;8!CL:0000081;7.57e-08;11!CL:0000738;4.50e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.85e-39,136;CL:0000037,3.39e-35,168;CL:0000988,3.34e-34,177;CL:0002087,3.25e-31,115;CL:0002031,4.50e-31,120;CL:0002032,5.67e-31,161;CL:0000837,5.67e-31,161;CL:0000766,4.04e-25,72;CL:0002393,1.55e-24,9;CL:0002397,1.55e-24,9;CL:0000557,9.36e-24,67;CL:0002009,4.18e-21,61;CL:0000763,1.45e-20,108;CL:0000049,1.45e-20,108;CL:0000860,9.73e-20,42;CL:0002057,9.73e-20,42;CL:0000839,1.17e-18,66;CL:0000473,2.37e-18,48;CL:0000234,2.37e-18,48;CL:0002194,3.04e-18,59;CL:0000576,3.04e-18,59;CL:0000040,3.04e-18,59;CL:0000559,3.04e-18,59;CL:0000791,1.70e-12,18;CL:0000789,1.70e-12,18;CL:0002420,1.70e-12,18;CL:0002419,1.70e-12,18;CL:0000790,1.70e-12,18;CL:0000624,8.68e-11,6;CL:0000134,1.73e-10,354;CL:0002320,5.14e-10,361;CL:0000838,5.53e-10,52;CL:0000542,1.02e-09,53;CL:0000051,1.02e-09,53;CL:0000875,3.16e-09,3;CL:0002396,3.16e-09,3;CL:0000623,4.97e-09,3;CL:0000825,4.97e-09,3;CL:0000767,6.13e-09,3;CL:0000219,6.69e-09,386;CL:0000084,2.15e-08,25;CL:0000827,2.15e-08,25;CL:0000034,2.45e-08,441;CL:0000226,4.84e-08,3;CL:0000842,4.84e-08,3;CL:0000081,7.31e-08,11;CL:0000094,7.70e-08,8;CL:0000048,2.29e-07,427;CL:0000723,4.49e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.30e-14;42!CL:0000790;1.69e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.99e-16!80;UBERON:0001474!2.68e-14!86;UBERON:0002390!2.97e-14!102;UBERON:0003061!2.97e-14!102;UBERON:0002193!4.82e-11!112;UBERON:0004765!4.89e-11!101;UBERON:0001434!4.89e-11!101;UBERON:0002405!5.75e-09!115;UBERON:0002384!1.49e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.21e-22,98;UBERON:0003061,3.21e-22,98;UBERON:0002371,7.79e-22,76;UBERON:0001474,1.19e-19,82;UBERON:0002193,2.69e-19,108;UBERON:0002405,7.64e-18,93;UBERON:0004765,3.38e-17,90;UBERON:0001434,1.08e-14,100;UBERON:0002384,2.26e-09,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.157421562627358,5.11373559903575,2.68680578668049,4.02521920621798,0,0,0,0.619737604642413,0.284338464974843,5.5784083473621,4.43196326825502,5.61524452916397,6.2933152507597,0,0,0.257575567634187,0.436194716338694,0.755751887377619,0,0.929716147622738,0.411167888021826,1.23882548358041,0.28769239232215,0.512321413058201,0.945928919554341,0.689491361473237,2.5819387343353,4.06279459783025,0.941211697713023,0.545812300115692,1.34834090667051,0.918251677112708,0.320929027076094,0,0.329851300186716,0.997318288108159,0.852449501065388,0.290209238628584,0,0.622822248995575,1.25624332628372,1.0429658368404,1.52032191293582,1.81619850790011,0.736555271975129,0.632924774881769,4.64761629886272,7.44115049877652,5.03180749220102,3.14520167210186,2.10247649978109,2.89306056054744,5.13022938734247,3.38158351238453,5.84525292046829,0,0.546138611262131,3.55803701545422,0.426730222566507,1.20118796110804,0.574752439954483,0,0.954053754535364,1.70763890732835,1.17447437874188,0.764546456250458,7.93027971474155,2.24203425192614,2.37045676297569,2.360517241366,3.14408610199332,4.31763147898969,0,0.651844533267181,1.89379122293893,1.94826728407911,1.00269411196656,1.17842362989935,3.1014745241707,3.24964636518019,0.384273959177026,0.520237390239513,0.328875809207352,0.552700035571697,0.289803085735052,2.96573126324121,2.40786745280742,1.04535523804977,0.339928028092699,4.21542542962113,7.90343124610049,3.28925599625354,0.318565414324097,0,0.950452044448374,1.6563263098555,0.639933055772092,1.24930726552346,0.236777252044017,0,3.62892137804518,4.81392352410313,4.05508330871837,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0,0,0,0.324547393654683,0,0,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,1.1409436430889,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.276149695926898,0.323292113637624,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.207322110030741,0.756962552626885,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0.441175890929576,0,0.474541238222193,0,0,1.15424147083917,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.737930631258681,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,1.58040879591855,0,0,0,0.297262324577456,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0.414656231081544,1.44119953416961,1.13618190083742,0.063497894292169,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,4.13764596424047,3.01878604803324,5.51875056002918,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,1.24324654030811,0,0.500170521059677,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.391602314925481,0,2.27444828735176,2.37285620900479,1.28073069364133,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0.483437798366489,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0.490080431962063,0.371606350251437,0.865615277858669,0.142283686696828,0,0.199579371432817,0.191505370132367,0.635020748171649,0.324621940274555,0.842391534340376,0,0.47003968731907,0,0.169291777801603,0.642352300414798,0,2.12923118845163,0.687010689511529,0.921722292925374,2.23676107892416,1.83534055883099,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0.557216921387392,0,0,0.296964680832639,0,0,0.281338832821026,0,0.988823245360557,0.844501632511974,0,0,0,0,0.123084805461069,0,0.179736702294654,0,2.04628948090749,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,1.52581736317083,0.884634079449797,0.295547618953547,0,0.21787692703798,0.278847488557207,0,0.227884111694002,0.23056390438806,0.718061155278177,0.325942115766024,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0.451191321234361,0,0,0.37950746544837,0,0.632994193584081,0.163232808159148,0.565412285735763,0.432777279484182,0,0.0884575645033392,0,2.6686901581256,0.370691816839509,0.104421949505455,0.404406797884062,0,0.468528891450678,0.364909578431332,0.19566461893209,0.485560759068186,0,0,0,0.31593289814244,1.80388103297391,0,0,0,0,0,0,0.138674673013139,0,0.391969589657511,0.261177619741208,0,0,0.290268993867255,0.511625219603299,0.246346371159628,0,0,0,0,0.19871461170299,0.126621591911757,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0.229073192331831,0.686379991447858,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0,0,0,0.136905378891993,2.55493176133945,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.295282444544246,0.254019996197353,0,0.272406812223151,0.964518890790115,1.78801267576404,1.66176135211674,1.799791132412,8.51182150013745,0.242998226632099,0.335434687599266,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0.339936274560377,0,0,0,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0.592834895693833,0,0,0,0,0,0.327872630709804,0.785270481251171,0,0.122026264901963,0,0,0.443716206147409,0.124192805882767,0,0.499921631848426,0,0,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.38582807654183,0.337884881306145,0.512483037175893,1.0362910251936,0,0.414775308455192,0.194860308839388,0.132864840313363,0,0.327609848846413,0.245772908753719,0,0.79994958341972,0.320075189082423,0.344429959321631,0,0,0.139879507719444,0,0.383683113910955,0.215649622793364,0.157265941855896,0.327628914576042,0.678930119816101,0.212574920101683,0.247871528518004,0,0,0.315446980005013,2.40171224485641,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0.471878893390961,0.183428598521679,0.346576998451015,0,0,0.198916222116275,0,0.60511520611056,0,0,0,0.147856086217045,0.0675375846183947,1.56215619722769,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0.383287282918786,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0.806637912890455,0.342976018874837,0.135939465953663,0.0657727735628491,0.354581522651905,0.222462803784138,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0,0.795803100645473,0.356760272332706,0.33883824611688,0.439762066981716,0.150962843566674,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.252332849670158,0.437062287854782,0.886889507080059,0.407955318967927,0.534434810531121,0.643264296743914,0.250707539292375,0,0.267964130156178,0,0.310298987585686,0.213233981900981,0,0,0.186224142887574,0.672791175483681,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | |||
|short_description=p@chr1:245134406..245134424,+ | |||
}} |
Revision as of 01:10, 11 January 2014
Short description: | p@chr1:245134406..245134424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:245134406..245134424, + |
Coexpression cluster: | C1656_CD14CD16_CD14_CD4_Basophils_CD8_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.21e-22 | 98 |
blood island | 3.21e-22 | 98 |
bone marrow | 7.79e-22 | 76 |
bone element | 1.19e-19 | 82 |
hemolymphoid system | 2.69e-19 | 108 |
immune system | 7.64e-18 | 93 |
skeletal element | 3.38e-17 | 90 |
skeletal system | 1.08e-14 | 100 |
connective tissue | 2.26e-09 | 371 |