FFCP PHASE1:Hg19::chr1:23953817..23953830,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=259283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29633 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NDY4 | |||
|association_with_transcript=0bp_to_ENST00000374555,NR_027042_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_MDS2_5end | |||
|id=chr1:23953817..23953830,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.29e-33!53;CL:0000051!1.29e-33!53;CL:0000838!6.24e-32!52;CL:0000791!1.50e-28!18;CL:0000789!1.50e-28!18;CL:0002420!1.50e-28!18;CL:0002419!1.50e-28!18;CL:0000790!1.50e-28!18;CL:0000084!1.67e-19!25;CL:0000827!1.67e-19!25;CL:0002087!2.00e-17!119;CL:0000624!2.23e-17!6;CL:0000625!1.26e-15!11;CL:0000738!1.65e-13!140;CL:0002031!7.48e-12!124;CL:0000236!3.79e-11!14;CL:0000037!3.36e-10!172;CL:0000566!3.36e-10!172;CL:0000898!1.40e-09!3;CL:0000623!3.44e-09!3;CL:0000825!3.44e-09!3;CL:0000988!3.51e-09!182;CL:0000842!3.74e-09!3;CL:0000945!4.95e-09!24;CL:0000826!4.95e-09!24;CL:0002032!1.74e-08!165;CL:0000837!1.74e-08!165;CL:0000224!6.00e-07!4;CL:0000815!6.47e-07!2;CL:0000792!6.47e-07!2;CL:0002677!6.47e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.92e-36;18!CL:0000789;6.92e-36;18!CL:0002419;6.92e-36;18!CL:0000624;5.41e-33;6!CL:0000084;2.98e-25;25!CL:0000898;1.75e-17;3!CL:0000623;7.46e-17;3!CL:0000542;1.03e-13;53!CL:0000625;6.02e-13;11!CL:0000815;3.91e-12;2!CL:0000792;3.91e-12;2!CL:0002677;3.91e-12;2!CL:0000226;2.24e-08;3!CL:0000842;2.24e-08;3!CL:0000895;4.64e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.40e-36,18;CL:0000789,4.40e-36,18;CL:0002420,4.40e-36,18;CL:0002419,4.40e-36,18;CL:0000790,4.40e-36,18;CL:0000624,4.23e-33,6;CL:0000838,3.64e-27,52;CL:0000542,1.39e-26,53;CL:0000051,1.39e-26,53;CL:0000084,2.16e-25,25;CL:0000827,2.16e-25,25;CL:0000898,1.61e-17,3;CL:0000623,9.58e-17,3;CL:0000825,9.58e-17,3;CL:0002087,3.98e-13,115;CL:0000625,4.81e-13,11;CL:0000815,3.13e-12,2;CL:0000792,3.13e-12,2;CL:0002677,3.13e-12,2;CL:0000738,1.68e-10,136;CL:0002031,1.27e-09,120;CL:0000226,3.13e-08,3;CL:0000842,3.13e-08,3;CL:0000037,9.04e-08,168;CL:0000988,3.49e-07,177;CL:0000810,5.37e-07,1;CL:0000895,5.37e-07,1;CL:0002436,5.37e-07,1;CL:0002427,5.37e-07,1;CL:0002428,5.37e-07,1;CL:0002429,5.37e-07,1;CL:0002433,5.37e-07,1;CL:0002431,5.37e-07,1;CL:0002432,5.37e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;6.92e-36;18!CL:0000051;1.03e-13;53!CL:0002427;4.64e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.63e-17!15;UBERON:0000179!2.63e-17!15;UBERON:0000463!2.63e-17!15;UBERON:0004177!4.33e-09!7;UBERON:0002370!9.17e-07!4;UBERON:0005058!9.17e-07!4;UBERON:0009113!9.17e-07!4;UBERON:0003295!9.17e-07!4;UBERON:0005562!9.17e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.25e-28;15!UBERON:0000179;3.25e-28;15!UBERON:0000463;3.25e-28;15!UBERON:0002390;5.77e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.78e-28,15;UBERON:0000179,3.78e-28,15;UBERON:0000463,3.78e-28,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,1.28019066769952,0,0.574752439954483,1.32208974556972,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,1.96709770113833,1.17903228824749,3.08402248499264,0.334372990781356,2.60737813306872,3.31413464014313,7.79306913631645,0.111410456885174,1.47302953737419,4.2091439970888,2.43723477388514,0.512365278902701,1.43065282315866,0.164437904603676,0,0,5.93146252648242,9.09638815505025,13.589618094647,0.339928028092699,2.29932296161153,2.40539211837841,1.77113784413652,0.318565414324097,0,0,4.51725357233318,4.8634912238679,3.74792179657038,2.60454977248419,1.64225599384209,0.80642697289893,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.07813787429759,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.862856803274467,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,1.13929437434833,2.38231775457789,2.87953591160336,1.29694662238543,1.62009431171434,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.806971285846153,0,0.190941474834495,0.202117188958219,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p2@MDS2 | |||
}} |
Revision as of 17:01, 10 January 2014
Short description: | p2@MDS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MDS2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000374555, NR_027042_5end |
EntrezGene: | MDS2 |
HGNC: | 29633 |
UniProt: | Q8NDY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.78e-28 | 15 |
haemolymphatic fluid | 3.78e-28 | 15 |
organism substance | 3.78e-28 | 15 |