FFCP PHASE1:Hg19::chr1:236046760..236046770,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |||
|association_with_transcript=101bp_to_ENST00000536965_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_13_at_LYST_5end | |||
|id=chr1:236046760..236046770,- | |||
|ontology_enrichment_celltype=CL:0000148!3.12e-20!10;CL:0000541!3.12e-20!10;CL:0000147!3.88e-14!14;CL:0002567!1.07e-13!3;CL:0000990!3.98e-11!8;CL:0000710!1.45e-09!20;CL:0000451!4.84e-09!10;CL:0000453!4.03e-08!5;CL:0002077!7.00e-07!33;CL:0000075!8.34e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.04e-69;10!CL:0000147;1.58e-49;14!CL:0002567;7.46e-44;3!CL:0000710;1.37e-34;20!CL:0000453;9.67e-26;5!CL:0000075;1.55e-25;27!CL:0002077;7.50e-18;34!CL:0002566;1.44e-15;1!CL:0000222;3.17e-15;1!CL:0000990;1.29e-14;8!CL:0000451;4.51e-12;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.26e-69,10;CL:0000541,2.26e-69,10;CL:0000147,1.70e-49,14;CL:0002567,6.94e-44,3;CL:0000710,1.44e-34,20;CL:0000453,9.27e-26,5;CL:0000075,1.61e-25,27;CL:0002077,3.47e-20,34;CL:0000333,7.18e-16,41;CL:0002566,1.54e-15,1;CL:0000990,1.26e-14,8;CL:0000451,4.42e-12,10;CL:0000133,4.82e-11,59;CL:0000221,5.21e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.41e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.38e-29;2!DOID:0060060;2.06e-15;1!DOID:0060061;2.06e-15;1!DOID:8691;2.06e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.92e-29,2;DOID:0060060,2.38e-15,1;DOID:0060061,2.38e-15,1;DOID:8691,2.38e-15,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,3.42888629177713,4.58386110669933,9.37739577680376,6.84289784090821,6.16964956219941,2.70308752059526,5.14487578735041,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0.920418142519393,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61101734904097,2.85465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,1.16916185303633,1.32864840313363,3.76200406788442,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p13@LYST | |||
}} |
Revision as of 00:53, 11 January 2014
Short description: | p13@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LYST_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 101bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.26e-69 | 10 |
melanoblast | 2.26e-69 | 10 |
pigment cell | 1.70e-49 | 14 |
light melanocyte | 6.94e-44 | 3 |
neurecto-epithelial cell | 1.44e-34 | 20 |
Langerhans cell | 9.27e-26 | 5 |
columnar/cuboidal epithelial cell | 1.61e-25 | 27 |
ecto-epithelial cell | 3.47e-20 | 34 |
migratory neural crest cell | 7.18e-16 | 41 |
dark melanocyte | 1.54e-15 | 1 |
conventional dendritic cell | 1.26e-14 | 8 |
dendritic cell | 4.42e-12 | 10 |
neurectodermal cell | 4.82e-11 | 59 |
ectodermal cell | 5.21e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.92e-29 | 2 |
non-Hodgkin lymphoma | 2.38e-15 | 1 |
cutaneous T cell lymphoma | 2.38e-15 | 1 |
mycosis fungoides | 2.38e-15 | 1 |