FFCP PHASE1:Hg19::chr1:228870893..228870910,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17794 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=24bp_to_uc001htf.2_5end | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_3_at_RHOU_5end | |||
|id=chr1:228870893..228870910,+ | |||
|ontology_enrichment_celltype=CL:0002009!3.11e-44!65;CL:0002194!2.17e-42!63;CL:0000576!2.17e-42!63;CL:0000040!2.17e-42!63;CL:0000559!2.17e-42!63;CL:0000557!1.12e-41!71;CL:0000766!1.10e-38!76;CL:0002057!4.85e-38!42;CL:0000839!5.07e-37!70;CL:0000763!2.58e-34!112;CL:0000049!2.58e-34!112;CL:0000860!2.77e-34!45;CL:0000738!5.31e-20!140;CL:0000037!3.27e-19!172;CL:0000566!3.27e-19!172;CL:0002087!1.19e-18!119;CL:0002032!5.97e-18!165;CL:0000837!5.97e-18!165;CL:0002031!8.41e-17!124;CL:0000988!1.19e-16!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-62;33!CL:0002057;2.52e-62;33!CL:0000473;2.69e-57;39!CL:0000234;2.69e-57;39!CL:0000576;3.23e-51;48!CL:0000766;4.62e-35;69!CL:0000763;7.85e-20;100!CL:0002087;1.08e-12;104!CL:0000738;9.48e-12;136!CL:0002619;3.19e-10;3!CL:0000767;5.99e-09;3!CL:0000235;1.59e-08;6!CL:0000840;1.33e-07;5!CL:0000988;3.93e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.70e-90,61;CL:0000557,1.63e-85,67;CL:0002194,2.24e-85,59;CL:0000576,2.24e-85,59;CL:0000040,2.24e-85,59;CL:0000559,2.24e-85,59;CL:0000766,1.18e-78,72;CL:0000839,2.99e-75,66;CL:0000473,6.18e-71,48;CL:0000234,6.18e-71,48;CL:0000763,6.27e-64,108;CL:0000049,6.27e-64,108;CL:0000860,1.34e-63,42;CL:0002057,1.34e-63,42;CL:0000738,6.21e-44,136;CL:0002087,1.00e-42,115;CL:0002031,1.71e-40,120;CL:0000037,4.48e-40,168;CL:0002032,8.60e-39,161;CL:0000837,8.60e-39,161;CL:0000988,2.20e-37,177;CL:0000134,1.66e-15,354;CL:0002320,6.05e-15,361;CL:0000219,5.72e-13,386;CL:0000048,3.01e-11,427;CL:0000723,6.63e-11,433;CL:0000034,1.84e-10,441;CL:0002619,2.88e-10,3;CL:0000767,2.72e-09,3;CL:0000235,1.62e-08,6;CL:0000840,1.24e-07,5;CL:0001029,1.24e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-48;42!CL:0000049;5.29e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-34!102;UBERON:0003061!1.51e-34!102;UBERON:0002371!3.00e-34!80;UBERON:0001474!1.02e-31!86;UBERON:0002193!6.29e-30!112;UBERON:0002405!2.79e-26!115;UBERON:0004765!1.60e-23!101;UBERON:0001434!1.60e-23!101;UBERON:0007023!1.62e-22!115;UBERON:0003081!5.55e-12!216;UBERON:0002204!8.42e-10!167;UBERON:0000062!1.57e-08!511;UBERON:0001049!1.33e-07!57;UBERON:0005068!1.33e-07!57;UBERON:0006241!1.33e-07!57;UBERON:0007135!1.33e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.14e-74,76;UBERON:0001474,3.25e-71,82;UBERON:0004765,7.03e-64,90;UBERON:0002390,6.72e-63,98;UBERON:0003061,6.72e-63,98;UBERON:0002405,1.58e-58,93;UBERON:0001434,2.40e-56,100;UBERON:0002193,5.54e-56,108;UBERON:0002204,1.49e-30,167;UBERON:0003081,1.79e-29,203;UBERON:0000926,2.28e-15,315;UBERON:0004120,2.28e-15,315;UBERON:0006603,2.28e-15,315;UBERON:0002384,3.53e-14,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.53531759238885,1.39334510984468,0,0,0,0,0,0,1.66198622559563,1.20326668482085,3.03815219002193,4.92614043327834,2.91504299417082,4.89393578504954,1.30858414901608,1.13362783106643,0.970336244751265,2.55671940596253,5.34518254428373,3.09706370895104,6.04154023876516,3.58624989140741,4.96612682766029,5.86067657252252,7.10033151942209,1.35426486594342,1.69418105588344,3.0019676506363,0.898893937780338,3.36692281607993,3.20929027076094,0.639337125799041,4.94776950280074,2.59302754908121,2.13112375266347,7.2552309657146,5.6738522469114,6.85104473895132,5.52747063564835,4.17186334736161,3.25783267057675,5.44859552370032,5.15588690382591,3.79754864929061,0.633765858935825,0.637812899895131,0.628975936525128,1.01095768031846,0.901061357049038,0.32145117339416,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0,0.130979075497713,0,0,1.29818957461873,0.870648686496336,1.46253756570752,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,3.20082107913617,0.702012795417713,2.97262324577457,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,1.20575750823834,0,0.699810938274399,4.86495122564762,2.00902836572851,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.03384013061444,1.50999940573032,0.74709290462411,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.952927101831156,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0.853702120180969,0,0,0,0,0.324621940274555,0,0,0.783399478865116,0,0,0.481764225311099,1.41259795033733,0.425846237690326,0.687010689511529,1.84344458585075,2.23676107892416,2.0021897005429,1.17232857241224,0,0,0.270455678475983,0,0,0,0.586032717087576,0,0,0,1.19372242368845,0,0,0,0.281338832821026,0,0,0,0.796991953004279,0,0,0.715880777515084,0,0,0,0,1.02314474045374,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0.384751292518985,0.227884111694002,1.1528195219403,0.628303510868405,0.325942115766024,1.27600463892768,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,1.14581926067151,0,0.702793337176017,0,0,0,0.789168805698781,0,0,2.21153028699708,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0.387956065953678,2.91245218081951,0.225980740780532,0,0,0.253243183823515,0.195551382734803,0,0.85381197895741,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,6.38732940334862,0,0,0.837847203816763,0.229160424011684,1.43574604915363,0,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,1.1248694577575,1.5476039091159,0.0607495566580247,0,0.236417121897595,0.209818352539992,0,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0.387848869084652,0.26446520348538,0,0,0.640724475406168,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0.265841714557995,0,0.601030435988874,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0.781514011233092,0.261906694481422,0,0,0.270150338473579,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0,0,0,0.535701835878287,0,0,0.455324382702595,0.532214220975833,0,0,0.0679697329768317,0.131545547125698,0,0,0.706437835654626,0.314231179832004,3.08299379645168,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0.17071847709395,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0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| |||
|short_description=p3@RHOU | |||
}} |
Revision as of 00:35, 11 January 2014
Short description: | p3@RHOU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RHOU_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 24bp_to_uc001htf.2_5end |
EntrezGene: | RHOU |
HGNC: | 17794 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.14e-74 | 76 |
bone element | 3.25e-71 | 82 |
skeletal element | 7.03e-64 | 90 |
hematopoietic system | 6.72e-63 | 98 |
blood island | 6.72e-63 | 98 |
immune system | 1.58e-58 | 93 |
skeletal system | 2.40e-56 | 100 |
hemolymphoid system | 5.54e-56 | 108 |
musculoskeletal system | 1.49e-30 | 167 |
lateral plate mesoderm | 1.79e-29 | 203 |
mesoderm | 2.28e-15 | 315 |
mesoderm-derived structure | 2.28e-15 | 315 |
presumptive mesoderm | 2.28e-15 | 315 |
connective tissue | 3.53e-14 | 371 |