FFCP PHASE1:Hg19::chr1:209781107..209781115,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57172 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14585 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENST00000494990_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_CAMK1G_5end | |||
|id=chr1:209781107..209781115,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.26e-67!42;CL:0000860!1.54e-62!45;CL:0002009!2.29e-58!65;CL:0000766!5.37e-58!76;CL:0000557!1.09e-55!71;CL:0002194!1.56e-53!63;CL:0000576!1.56e-53!63;CL:0000040!1.56e-53!63;CL:0000559!1.56e-53!63;CL:0000839!3.43e-50!70;CL:0000763!1.77e-47!112;CL:0000049!1.77e-47!112;CL:0000738!1.27e-45!140;CL:0000988!1.21e-37!182;CL:0000037!6.06e-35!172;CL:0000566!6.06e-35!172;CL:0002032!2.19e-33!165;CL:0000837!2.19e-33!165;CL:0002031!5.06e-33!124;CL:0002087!6.84e-33!119;CL:0000990!6.29e-21!8;CL:0000451!7.15e-17!10;CL:0000453!1.05e-15!5;CL:0000080!1.57e-13!6;CL:0000840!6.86e-13!5;CL:0001029!6.86e-13!5;CL:0000134!4.04e-12!358;CL:0002320!1.17e-11!365;CL:0000219!4.95e-10!390;CL:0000048!4.22e-08!430;CL:0000034!4.44e-08!444;CL:0000723!7.90e-08!436;CL:0000081!1.67e-07!11;CL:0001014!1.72e-07!2;CL:0001016!1.72e-07!2;CL:0000094!6.00e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.88e-56;33!CL:0002057;3.88e-56;33!CL:0000473;2.38e-38;39!CL:0000234;2.38e-38;39!CL:0000576;6.21e-35;48!CL:0000766;2.19e-25;69!CL:0002393;9.69e-12;6!CL:0002397;9.69e-12;6!CL:0002087;2.03e-11;104!CL:0000081;2.84e-11;11!CL:0000775;4.32e-11;3!CL:0000763;4.56e-11;100!CL:0000094;3.32e-09;8!CL:0000738;9.51e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.82e-67,42;CL:0002057,5.82e-67,42;CL:0000473,3.71e-58,48;CL:0000234,3.71e-58,48;CL:0000766,4.69e-50,72;CL:0002009,6.71e-49,61;CL:0002194,8.01e-46,59;CL:0000576,8.01e-46,59;CL:0000040,8.01e-46,59;CL:0000559,8.01e-46,59;CL:0000557,2.91e-44,67;CL:0000839,1.15e-40,66;CL:0000763,2.61e-35,108;CL:0000049,2.61e-35,108;CL:0000738,2.84e-27,136;CL:0000988,2.88e-26,177;CL:0002031,3.05e-23,120;CL:0002032,1.95e-22,161;CL:0000837,1.95e-22,161;CL:0002087,5.85e-22,115;CL:0000037,2.44e-21,168;CL:0000081,2.65e-11,11;CL:0000775,4.00e-11,3;CL:0000094,3.19e-09,8;CL:0002393,5.27e-08,9;CL:0002397,5.27e-08,9;CL:0000134,6.20e-08,354;CL:0002320,1.07e-07,361;CL:0000219,7.41e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-44;42!CL:0000049;7.29e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.51e-53!102;UBERON:0003061!6.51e-53!102;UBERON:0002193!1.64e-49!112;UBERON:0002371!2.24e-48!80;UBERON:0001474!2.42e-44!86;UBERON:0002405!1.78e-36!115;UBERON:0004765!2.42e-36!101;UBERON:0001434!2.42e-36!101;UBERON:0003081!1.69e-21!216;UBERON:0002204!3.40e-18!167;UBERON:0002384!5.00e-11!375;UBERON:0000926!3.10e-07!448;UBERON:0004120!3.10e-07!448;UBERON:0006603!3.10e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.81e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.08e-39,98;UBERON:0003061,6.08e-39,98;UBERON:0002371,1.17e-38,76;UBERON:0001474,1.34e-35,82;UBERON:0002193,5.25e-35,108;UBERON:0004765,3.84e-32,90;UBERON:0002405,5.36e-31,93;UBERON:0001434,1.37e-28,100;UBERON:0003081,8.28e-17,203;UBERON:0002204,1.13e-15,167;UBERON:0000926,2.38e-09,315;UBERON:0004120,2.38e-09,315;UBERON:0006603,2.38e-09,315;UBERON:0002384,2.27e-07,371;UBERON:0002331,4.51e-07,10;UBERON:0000358,4.51e-07,10;UBERON:0000307,4.51e-07,10;UBERON:0000091,4.51e-07,10;UBERON:0000087,4.51e-07,10;UBERON:0007010,4.51e-07,10;UBERON:0007806,4.51e-07,10;UBERON:0008780,4.51e-07,10;UBERON:0005728,4.51e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0,4.43196326825502,5.21415563422368,1.73608696572681,0,0,0,0,0.377875943688809,0,0.697287110717054,0.822335776043652,0.309706370895104,4.31538588483226,5.37937483711111,7.56743135643473,0.344745680736619,2.5819387343353,1.35426486594342,0.376484679085209,0.545812300115692,1.34834090667051,3.36692281607993,4.17207735198922,3.19668562899521,0.329851300186716,0.199463657621632,1.70489900213078,2.90209238628584,7.94339314567596,7.4738669879469,0.251248665256743,4.17186334736161,2.17188844705117,0,8.10210799172642,5.69632297393592,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.038279312852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24304916763028,0,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85477467284809,1.35920332841153,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@CAMK1G | |||
}} |
Revision as of 23:57, 10 January 2014
Short description: | p3@CAMK1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAMK1G_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -23bp_to_ENST00000494990_5end |
EntrezGene: | CAMK1G |
HGNC: | 14585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.82e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.82e-67 | 42 |
defensive cell | 3.71e-58 | 48 |
phagocyte | 3.71e-58 | 48 |
myeloid leukocyte | 4.69e-50 | 72 |
macrophage dendritic cell progenitor | 6.71e-49 | 61 |
monopoietic cell | 8.01e-46 | 59 |
monocyte | 8.01e-46 | 59 |
monoblast | 8.01e-46 | 59 |
promonocyte | 8.01e-46 | 59 |
granulocyte monocyte progenitor cell | 2.91e-44 | 67 |
myeloid lineage restricted progenitor cell | 1.15e-40 | 66 |
myeloid cell | 2.61e-35 | 108 |
common myeloid progenitor | 2.61e-35 | 108 |
leukocyte | 2.84e-27 | 136 |
hematopoietic cell | 2.88e-26 | 177 |
hematopoietic lineage restricted progenitor cell | 3.05e-23 | 120 |
hematopoietic oligopotent progenitor cell | 1.95e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-22 | 161 |
nongranular leukocyte | 5.85e-22 | 115 |
hematopoietic stem cell | 2.44e-21 | 168 |
blood cell | 2.65e-11 | 11 |
neutrophil | 4.00e-11 | 3 |
granulocyte | 3.19e-09 | 8 |
intermediate monocyte | 5.27e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.27e-08 | 9 |
mesenchymal cell | 6.20e-08 | 354 |
connective tissue cell | 1.07e-07 | 361 |
motile cell | 7.41e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.08e-39 | 98 |
blood island | 6.08e-39 | 98 |
bone marrow | 1.17e-38 | 76 |
bone element | 1.34e-35 | 82 |
hemolymphoid system | 5.25e-35 | 108 |
skeletal element | 3.84e-32 | 90 |
immune system | 5.36e-31 | 93 |
skeletal system | 1.37e-28 | 100 |
lateral plate mesoderm | 8.28e-17 | 203 |
musculoskeletal system | 1.13e-15 | 167 |
mesoderm | 2.38e-09 | 315 |
mesoderm-derived structure | 2.38e-09 | 315 |
presumptive mesoderm | 2.38e-09 | 315 |
connective tissue | 2.27e-07 | 371 |
umbilical cord | 4.51e-07 | 10 |
blastocyst | 4.51e-07 | 10 |
blastula | 4.51e-07 | 10 |
bilaminar disc | 4.51e-07 | 10 |
inner cell mass | 4.51e-07 | 10 |
cleaving embryo | 4.51e-07 | 10 |
connecting stalk | 4.51e-07 | 10 |
inner cell mass derived epiblast | 4.51e-07 | 10 |
extraembryonic mesoderm | 4.51e-07 | 10 |