FFCP PHASE1:Hg19::chr1:207059144..207059147,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C414 | |||
|description=CAGE_peak_at_chr1:207059144..207059147,+ | |||
|id=chr1:207059144..207059147,+ | |||
|ontology_enrichment_celltype=CL:0002097!4.66e-21!2;CL:0000163!1.61e-18!9;CL:0000174!1.60e-14!3;CL:0002274!3.49e-09!5;CL:0000457!3.49e-09!5;CL:0002191!3.49e-09!5;CL:0000097!3.49e-09!5;CL:0000831!3.49e-09!5;CL:0002028!3.49e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.76e-18;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.76e-18,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.25e-19;11!UBERON:0009497;1.21e-16;13!UBERON:0001041;4.53e-08;30!UBERON:0003104;4.53e-08;31 | |||
|ontology_enrichment_disease=DOID:2394!2.37e-12!14;DOID:170!6.34e-08!6;DOID:120!7.03e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001282!6.62e-41!1;UBERON:0009842!6.62e-41!1;UBERON:0003704!6.62e-41!1;UBERON:0001171!6.62e-41!1;UBERON:0001172!6.62e-41!1;UBERON:0002369!1.60e-14!3;UBERON:0001235!1.60e-14!3;UBERON:0006858!1.60e-14!3;UBERON:0002394!2.53e-11!4;UBERON:0003928!2.53e-11!4;UBERON:0001280!2.53e-11!4;UBERON:0004647!2.53e-11!4;UBERON:0002118!3.22e-09!5;UBERON:0004532!3.22e-09!5;UBERON:0002294!5.08e-07!7;UBERON:0001173!5.08e-07!7;UBERON:0004912!5.08e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.42e-195;1!UBERON:0009842;5.42e-195;1!UBERON:0003704;5.42e-195;1!UBERON:0001171;5.42e-195;1!UBERON:0001172;5.42e-195;1!UBERON:0001280;2.39e-66;3!UBERON:0004647;2.39e-66;3!UBERON:0002394;3.10e-50;4!UBERON:0003928;3.10e-50;4!UBERON:0002294;1.78e-29;7!UBERON:0001173;1.78e-29;7!UBERON:0000058;3.81e-21;10!UBERON:0000353;1.22e-14;15!UBERON:0002107;6.95e-12;19!UBERON:0006925;6.95e-12;19!UBERON:0002423;2.15e-09;25!UBERON:0002368;2.32e-07;33!UBERON:0002365;2.32e-07;31!UBERON:0002330;2.32e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,5.42e-195,1;UBERON:0009842,5.42e-195,1;UBERON:0003704,5.42e-195,1;UBERON:0001171,5.42e-195,1;UBERON:0001172,5.42e-195,1;UBERON:0001280,2.39e-66,3;UBERON:0004647,2.39e-66,3;UBERON:0005171,2.39e-66,3;UBERON:0002394,4.27e-34,6;UBERON:0003928,4.27e-34,6;UBERON:0002294,2.62e-23,9;UBERON:0001173,2.62e-23,9;UBERON:0004912,2.62e-23,9;UBERON:0000353,1.22e-14,15;UBERON:0002107,6.95e-12,19;UBERON:0000058,6.95e-12,19;UBERON:0006925,6.95e-12,19;UBERON:0008836,6.95e-12,19;UBERON:0008835,1.80e-10,22;UBERON:0003894,1.80e-10,22;UBERON:0009854,4.42e-10,23;UBERON:0007499,2.15e-09,25;UBERON:0009497,2.15e-09,25;UBERON:0000015,2.15e-09,25;UBERON:0002423,2.15e-09,25;UBERON:0006235,2.15e-09,25;UBERON:0004161,2.15e-09,25;UBERON:0009856,4.34e-09,26;UBERON:0002365,7.41e-08,31;UBERON:0002330,7.41e-08,31;UBERON:0002368,4.03e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:207059144..207059147,+ | |||
}} |
Revision as of 23:49, 10 January 2014
Short description: | p@chr1:207059144..207059147, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207059144..207059147, + |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.76e-18 | 12 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 5.42e-195 | 1 |
acinus | 5.42e-195 | 1 |
intrahepatic bile duct | 5.42e-195 | 1 |
portal lobule | 5.42e-195 | 1 |
hepatic acinus | 5.42e-195 | 1 |
liver parenchyma | 2.39e-66 | 3 |
liver lobule | 2.39e-66 | 3 |
hepatic duct | 2.39e-66 | 3 |
bile duct | 4.27e-34 | 6 |
digestive system duct | 4.27e-34 | 6 |
biliary system | 2.62e-23 | 9 |
biliary tree | 2.62e-23 | 9 |
biliary bud | 2.62e-23 | 9 |
parenchyma | 1.22e-14 | 15 |
liver | 6.95e-12 | 19 |
duct | 6.95e-12 | 19 |
digestive gland | 6.95e-12 | 19 |
liver bud | 6.95e-12 | 19 |
hepatic diverticulum | 1.80e-10 | 22 |
liver primordium | 1.80e-10 | 22 |
digestive tract diverticulum | 4.42e-10 | 23 |
epithelial sac | 2.15e-09 | 25 |
epithelium of foregut-midgut junction | 2.15e-09 | 25 |
anatomical boundary | 2.15e-09 | 25 |
hepatobiliary system | 2.15e-09 | 25 |
foregut-midgut junction | 2.15e-09 | 25 |
septum transversum | 2.15e-09 | 25 |
sac | 4.34e-09 | 26 |
exocrine gland | 7.41e-08 | 31 |
exocrine system | 7.41e-08 | 31 |
endocrine gland | 4.03e-07 | 35 |