FFCP PHASE1:Hg19::chr1:203317210..203317231,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=2331 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3774 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=173bp_to_uc010pqi.1_5end | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_4_at_FMOD_5end | |||
|id=chr1:203317210..203317231,- | |||
|ontology_enrichment_celltype=CL:0000136!1.16e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.39e-26;13!CL:0000153;3.24e-10;9!CL:0000447;3.24e-10;9!CL:0002334;3.32e-09;12!CL:0002615;4.59e-09;3!CL:0000499;1.31e-08;28!CL:0002579;1.89e-08;3!CL:0000135;3.21e-08;3!CL:0000388;3.21e-08;3!CL:0002580;1.19e-07;3!CL:0000327;1.29e-07;15!CL:0000138;1.71e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.18e-22,15;CL:0000153,3.20e-10,9;CL:0000447,3.20e-10,9;CL:0002334,3.87e-09,12;CL:0002615,4.78e-09,3;CL:0000499,1.30e-08,28;CL:0002579,1.87e-08,3;CL:0000135,3.55e-08,3;CL:0000388,3.55e-08,3;CL:0000327,1.14e-07,15;CL:0002580,1.51e-07,3;CL:0000058,1.75e-07,6;CL:0000138,1.75e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-20!115;UBERON:0004457!7.55e-09!12;UBERON:0000042!7.55e-09!12;UBERON:0003688!3.14e-08!6;UBERON:0002358!3.14e-08!6;UBERON:0003684!3.14e-08!6;UBERON:0001178!3.14e-08!6;UBERON:0004458!1.28e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.67e-18;9!UBERON:0000042;7.67e-18;9!UBERON:0003688;8.13e-16;6!UBERON:0002358;8.13e-16;6!UBERON:0003684;8.13e-16;6!UBERON:0001178;8.13e-16;6!UBERON:0001443;6.38e-10;11!UBERON:0003978;2.51e-08;3!UBERON:0000946;2.51e-08;3!UBERON:0000310;3.10e-08;10!UBERON:0007846;3.21e-08;3!UBERON:0000043;3.21e-08;3!UBERON:0007845;3.21e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.38e-16,6;UBERON:0002358,8.38e-16,6;UBERON:0003684,8.38e-16,6;UBERON:0001178,8.38e-16,6;UBERON:0004457,5.80e-13,12;UBERON:0000042,5.80e-13,12;UBERON:0001443,6.05e-10,11;UBERON:0003978,2.58e-08,3;UBERON:0009751,2.58e-08,3;UBERON:0000946,2.58e-08,3;UBERON:0002523,2.58e-08,3;UBERON:0005983,2.58e-08,3;UBERON:0002165,2.58e-08,3;UBERON:0002062,2.58e-08,3;UBERON:0007280,2.58e-08,3;UBERON:0000310,2.97e-08,10;UBERON:0007846,3.55e-08,3;UBERON:0000043,3.55e-08,3;UBERON:0007845,3.55e-08,3;UBERON:0007023,6.47e-07,114 | |||
|phase1_expression=4.72363786103447,9.63452357509424,13.6725771973092,9.00659685178174,19.6662881548007,6.10636966870258,0,2.52687949370732,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.767175371061182,0,5.0133791063589,8.25625158076695,13.5198610998687,53.0432008629873,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0078563452417,0,1.12135520028461,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,2.85452311922534,0,0,0.85422955527427,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0,0,0.368199594569197,3.39456719319505,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,1.71573592389777,0.542621605391443,0,0,0.710783897485092,0,1.20575750823834,0,0.099972991182057,0,0,0,0.958499421966331,4.59447743336456,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.473107245101804,0.819989904948992,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23297027036899,1.2276957863045,4.2099014164961,9.61043619417757,3.58195074346692,4.50390979202101,4.45254199334973,0,0.177561725313127,0,0,0.116210378459959,0.966875596732978,0,0,0.34444334449382,0,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.03041011647722,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,0,0.30982349809975,0,0,0,0,0,7.17765960012058,3.62224382255892,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0,0,0,10.3608953890556,0.552567831062295,0,0,0,1.55519793830904,0,0,0,0.591860433821602,0,0,0,0,0,0,0.0874599999961957,2.89999830173917,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.658156191461918,0,0,2.5393585306253,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,1.22206028986725,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0.394584402849391,0,0,4.48624715362264,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,0.581934098930517,0,7.90932592731864,0,0,0,0,0,5.33632486848381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5226848661572,2.29160424011684,3.58936512288407,0,0.858452096273142,0.669514372325618,0.335917362433631,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0,0,0.394028536495991,0.472091293214983,0,0.179287339332845,0,2.1440859791201,0.662091970365432,0,0,0,0.653174720218818,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.320362237703084,0.314408610199332,0.828478110694391,1.9846640872478,0.197611631897944,0,0,7.07223144380316,2.7575888342497,9.49671287966731,10.8197968134235,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0.467426619694449,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,1.95334891696384,0,0.406870733204662,0,0.429642228169954,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.389720617678777,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,1.39241355481392,2.25630985047772,0.20170506870352,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,1.98484471355718,0,0,0,0,1.21393120847326,0.227662191351298,0.266107110487916,0.115233987555779,0.171488009437418,0,0,0,0,1.17739639275771,0,0,2.73947616152849,0,0,1.00067161847319,0,0,0,0.801711364730253,0.414432328326074,0,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0.647428837187895,0.615976841137482,12.7579587447202,1.94284397223656,0,0,0,0,0,0,0.231522474323834,1.5299169235277,0,0.980593287015622,0,0.588925401344836,0,1.2679671827502,0,0.469919589899268,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,6.87734892670021,2.23197010900051,9.70568820125978,3.46101249699031,0,0,12.0363575960865,0,0,0,0,0.985123076837112,0.803892390468535,0,0.103432995861895,3.19850972851471,2.3806443146374,0.0645889098360061,0.186224142887574,0,2.10035622317944,1.0105859447911,2.17716747896961,2.05339980651169,0.471464371102113,1.36272190246085,10.9777917660184,0.0814032686109745,0,0,0,4.69281884806909,2.68931177202306,2.84827324821017,2.66302709674205,2.21401172950129,0 | |||
|short_description=p4@FMOD | |||
}} |
Revision as of 23:31, 10 January 2014
Short description: | p4@FMOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_FMOD_5end |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | 173bp_to_uc010pqi.1_5end |
EntrezGene: | FMOD |
HGNC: | 3774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.18e-22 | 15 |
GAG secreting cell | 3.20e-10 | 9 |
carbohydrate secreting cell | 3.20e-10 | 9 |
preadipocyte | 3.87e-09 | 12 |
adipocyte of omentum tissue | 4.78e-09 | 3 |
stromal cell | 1.30e-08 | 28 |
omentum preadipocyte | 1.87e-08 | 3 |
fibrocyte | 3.55e-08 | 3 |
tendon cell | 3.55e-08 | 3 |
extracellular matrix secreting cell | 1.14e-07 | 15 |
preadipocyte of the breast | 1.51e-07 | 3 |
chondroblast | 1.75e-07 | 6 |
chondrocyte | 1.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.38e-16 | 6 |
peritoneum | 8.38e-16 | 6 |
abdominal cavity | 8.38e-16 | 6 |
visceral peritoneum | 8.38e-16 | 6 |
cavity lining | 5.80e-13 | 12 |
serous membrane | 5.80e-13 | 12 |
chest | 6.05e-10 | 11 |
valve | 2.58e-08 | 3 |
cardiac mesenchyme | 2.58e-08 | 3 |
cardial valve | 2.58e-08 | 3 |
tunica intima | 2.58e-08 | 3 |
heart layer | 2.58e-08 | 3 |
endocardium | 2.58e-08 | 3 |
endocardial cushion | 2.58e-08 | 3 |
presumptive endocardium | 2.58e-08 | 3 |
breast | 2.97e-08 | 10 |
dense regular connective tissue | 3.55e-08 | 3 |
tendon | 3.55e-08 | 3 |
regular connective tissue | 3.55e-08 | 3 |
adult organism | 6.47e-07 | 114 |