FFCP PHASE1:Hg19::chr1:201333468..201333485,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-152bp_to_ENST00000460780,uc001gwj.1_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_11_at_TNNT2_5end | |||
|id=chr1:201333468..201333485,- | |||
|ontology_enrichment_celltype=CL:0000188!1.68e-20!9;CL:0000594!6.21e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;7.79e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.66e-35;4!UBERON:0007284;2.66e-35;4!UBERON:0010226;9.58e-17;1!UBERON:0010227;1.21e-16;1!UBERON:0004140;1.65e-16;1!UBERON:0003104;3.72e-08;31 | |||
|ontology_enrichment_disease=DOID:114!3.17e-12!2;DOID:178!6.59e-07!1;DOID:326!6.59e-07!1;DOID:3978!6.59e-07!1;DOID:3394!6.59e-07!1;DOID:5844!6.59e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;4.59e-32;2!DOID:178;7.57e-17;1!DOID:326;7.57e-17;1!DOID:3978;7.57e-17;1!DOID:3394;7.57e-17;1!DOID:5844;7.57e-17;1!DOID:1287;1.42e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.59e-32,2;DOID:178,7.57e-17,1;DOID:326,7.57e-17,1;DOID:3978,7.57e-17,1;DOID:3394,7.57e-17,1;DOID:5844,7.57e-17,1;DOID:1287,1.42e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.86e-18!27;UBERON:0003978!2.48e-17!3;UBERON:0009751!2.48e-17!3;UBERON:0000946!2.48e-17!3;UBERON:0002523!2.48e-17!3;UBERON:0005983!2.48e-17!3;UBERON:0002165!2.48e-17!3;UBERON:0002062!2.48e-17!3;UBERON:0007280!2.48e-17!3;UBERON:0004151!3.62e-17!3;UBERON:0002133!4.39e-12!2;UBERON:0002081!5.45e-12!2;UBERON:0000948!2.99e-10!24;UBERON:0005498!2.99e-10!24;UBERON:0004140!2.99e-10!24;UBERON:0009881!2.99e-10!24;UBERON:0004141!2.99e-10!24;UBERON:0003084!2.99e-10!24;UBERON:0007005!2.99e-10!24;UBERON:0004139!2.99e-10!24;UBERON:0004291!2.99e-10!24;UBERON:0002385!2.16e-09!63;UBERON:0001015!2.16e-09!63;UBERON:0000383!2.16e-09!63;UBERON:0003103!8.03e-09!69;UBERON:0007023!3.66e-08!115;UBERON:0001134!4.15e-08!61;UBERON:0002036!4.15e-08!61;UBERON:0003082!4.15e-08!61;UBERON:0002146!5.90e-07!1;UBERON:0005623!5.90e-07!1;UBERON:0002135!6.23e-07!1;UBERON:0002084!6.96e-07!1;UBERON:0002082!6.96e-07!1;UBERON:0004706!6.96e-07!1;UBERON:0002079!7.77e-07!1;UBERON:0002134!8.21e-07!1;UBERON:0005208!8.21e-07!1;UBERON:0005946!8.21e-07!1;UBERON:0005965!8.21e-07!1;UBERON:0002078!8.21e-07!1;UBERON:0004290!8.28e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.69e-49;25!UBERON:0003978;8.84e-47;3!UBERON:0000946;8.84e-47;3!UBERON:0004151;2.83e-46;3!UBERON:0002133;1.17e-31;2!UBERON:0002081;2.18e-31;2!UBERON:0000948;6.94e-25;22!UBERON:0002146;5.53e-17;1!UBERON:0005623;5.53e-17;1!UBERON:0002135;6.47e-17;1!UBERON:0002084;9.58e-17;1!UBERON:0002082;9.58e-17;1!UBERON:0002079;1.21e-16;1!UBERON:0002134;1.41e-16;1!UBERON:0005208;1.41e-16;1!UBERON:0004145;1.41e-16;1!UBERON:0005946;1.41e-16;1!UBERON:0005965;1.41e-16;1!UBERON:0002078;1.41e-16;1!UBERON:0010313;1.47e-14;10!UBERON:0003103;5.41e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,8.84e-47,3;UBERON:0009751,8.84e-47,3;UBERON:0000946,8.84e-47,3;UBERON:0002523,8.84e-47,3;UBERON:0005983,8.84e-47,3;UBERON:0002165,8.84e-47,3;UBERON:0002062,8.84e-47,3;UBERON:0007280,8.84e-47,3;UBERON:0004151,2.62e-46,3;UBERON:0007100,3.07e-45,27;UBERON:0002133,1.17e-31,2;UBERON:0002081,2.18e-31,2;UBERON:0010227,2.18e-31,2;UBERON:0000948,8.22e-23,24;UBERON:0005498,8.22e-23,24;UBERON:0004140,8.22e-23,24;UBERON:0009881,8.22e-23,24;UBERON:0004141,8.22e-23,24;UBERON:0003084,8.22e-23,24;UBERON:0007005,8.22e-23,24;UBERON:0004139,8.22e-23,24;UBERON:0004291,8.22e-23,24;UBERON:0004797,1.67e-20,7;UBERON:0003103,1.43e-17,68;UBERON:0002146,5.53e-17,1;UBERON:0005623,5.53e-17,1;UBERON:0002135,6.47e-17,1;UBERON:0002084,8.86e-17,1;UBERON:0002082,8.86e-17,1;UBERON:0010226,8.86e-17,1;UBERON:0002079,1.21e-16,1;UBERON:0002134,1.41e-16,1;UBERON:0005208,1.41e-16,1;UBERON:0005946,1.41e-16,1;UBERON:0005965,1.41e-16,1;UBERON:0002078,1.41e-16,1;UBERON:0010313,1.47e-14,10;UBERON:0002342,1.47e-14,10;UBERON:0005062,1.47e-14,10;UBERON:0001009,2.36e-10,112;UBERON:0007023,5.03e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0.307007349452259,0.275673144969061,0,0.290033387828457,0.511359764496605,1.15741646340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.49560164325664,10.3122190805258,4.30723814746088,8.58619702145662,18.8859461180091,6.24880080837243,3.96382487671685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71756261098694,6.62091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p11@TNNT2 | |||
}} |
Revision as of 23:16, 10 January 2014
Short description: | p11@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -152bp_to_ENST00000460780, uc001gwj.1_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.59e-32 | 2 |
vascular disease | 7.57e-17 | 1 |
ischemia | 7.57e-17 | 1 |
extrinsic cardiomyopathy | 7.57e-17 | 1 |
myocardial ischemia | 7.57e-17 | 1 |
myocardial infarction | 7.57e-17 | 1 |
cardiovascular system disease | 1.42e-16 | 4 |