FFCP PHASE1:Hg19::chr1:183178134..183178138,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:183178134..183178138,+ | |||
|id=chr1:183178134..183178138,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.51e-32!43;CL:0000223!2.22e-26!59;CL:0002251!1.01e-16!21;CL:0000066!7.57e-16!254;CL:0002368!3.64e-12!13;CL:0002621!7.08e-11!3;CL:0000317!2.65e-08!2;CL:1000448!2.65e-08!2;CL:0002308!2.65e-08!2;CL:0002140!2.65e-08!2;CL:0000076!2.46e-07!62;CL:0000622!5.44e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000317;9.07e-18;2!CL:1000448;9.07e-18;2!CL:0002308;9.07e-18;2!CL:0002140;9.07e-18;2!CL:0000244;1.44e-09;4!CL:0000731;1.44e-09;4!CL:0000622;6.55e-08;5!CL:0000154;8.48e-07;6!CL:0002149;8.48e-07;6!CL:0002255;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.27e-17,2;CL:1000448,1.27e-17,2;CL:0002308,1.27e-17,2;CL:0002140,1.27e-17,2;CL:0000244,1.57e-09,4;CL:0000731,1.57e-09,4;CL:0000622,7.49e-08,5;CL:0002149,7.58e-07,6;CL:0002255,7.58e-07,6;CL:0000154,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.05e-17!14;DOID:305!1.91e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3001;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003729!3.06e-16!5;UBERON:0003343!1.15e-13!4;UBERON:0004785!1.15e-13!4;UBERON:0004119!1.01e-12!169;UBERON:0000925!1.01e-12!169;UBERON:0006595!1.01e-12!169;UBERON:0000344!1.88e-12!12;UBERON:0000161!4.76e-11!35;UBERON:0001949!7.08e-11!3;UBERON:0001007!3.09e-10!155;UBERON:0001555!3.09e-10!155;UBERON:0007026!3.09e-10!155;UBERON:0001004!2.93e-09!72;UBERON:0000166!5.34e-09!21;UBERON:0002419!2.65e-08!2;UBERON:0007771!2.65e-08!2;UBERON:0003297!2.65e-08!2;UBERON:0001821!2.65e-08!2;UBERON:0003487!2.65e-08!2;UBERON:0001820!2.65e-08!2;UBERON:0005089!2.65e-08!2;UBERON:0005088!2.65e-08!2;UBERON:0002394!4.29e-08!4;UBERON:0003928!4.29e-08!4;UBERON:0000974!4.39e-08!10;UBERON:0000165!5.42e-08!28;UBERON:0000930!5.42e-08!28;UBERON:0005911!2.11e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.05e-34;1!UBERON:0005056;5.05e-34;1!UBERON:0004176;5.05e-34;1!UBERON:0002419;9.07e-18;2!UBERON:0007771;9.07e-18;2!UBERON:0003297;9.07e-18;2!UBERON:0001821;9.07e-18;2!UBERON:0003487;9.07e-18;2!UBERON:0001820;9.07e-18;2!UBERON:0000365;6.55e-08;5!UBERON:0005910;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,3.61e-34,1;UBERON:0005056,3.61e-34,1;UBERON:0002419,1.27e-17,2;UBERON:0007771,1.27e-17,2;UBERON:0003297,1.27e-17,2;UBERON:0001821,1.27e-17,2;UBERON:0003487,1.27e-17,2;UBERON:0001820,1.27e-17,2;UBERON:0005089,1.27e-17,2;UBERON:0005088,1.27e-17,2;UBERON:0000365,7.01e-08,5;UBERON:0005910,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,3.31793052485919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,0,0,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,1.37897349296586,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,1.56787835863004,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.235939446695481,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,1.8328549483524,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:183178134..183178138,+ | |||
}} |
Revision as of 22:39, 10 January 2014
Short description: | p@chr1:183178134..183178138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183178134..183178138, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.27e-17 | 2 |
epithelial cell of sweat gland | 1.27e-17 | 2 |
epithelial cell of skin gland | 1.27e-17 | 2 |
acinar cell of sebaceous gland | 1.27e-17 | 2 |
transitional epithelial cell | 1.57e-09 | 4 |
urothelial cell | 1.57e-09 | 4 |
acinar cell | 7.49e-08 | 5 |
epithelial cell of uterus | 7.58e-07 | 6 |
stromal cell of endometrium | 7.58e-07 | 6 |
protein secreting cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 3.61e-34 | 1 |
external female genitalia | 3.61e-34 | 1 |
skin gland | 1.27e-17 | 2 |
epidermis gland | 1.27e-17 | 2 |
gland of integumental system | 1.27e-17 | 2 |
sebaceous gland | 1.27e-17 | 2 |
skin sebaceous gland | 1.27e-17 | 2 |
sweat gland | 1.27e-17 | 2 |
sweat gland placode | 1.27e-17 | 2 |
sebaceous gland placode | 1.27e-17 | 2 |
urothelium | 7.01e-08 | 5 |
transitional epithelium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.58e-07 | 6 |