FFCP PHASE1:Hg19::chr1:163039143..163039159,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10000 | |||
|TSSclassifier=weak | |||
|UniProt=B1APZ3,A7YVV7,E9PR32 | |||
|association_with_transcript=0bp_to_ENST00000367908,ENST00000491263,ENST00000527809,ENST00000531057_5end | |||
|coexpression_cluster_id=C3897 | |||
|description=CAGE_peak_1_at_RGS4_5end | |||
|id=chr1:163039143..163039159,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.53e-28!180;CL:0000222!3.56e-22!119;CL:0000680!8.86e-20!57;CL:0000056!8.86e-20!57;CL:0000355!8.86e-20!57;CL:0000183!5.34e-19!59;CL:0000187!1.16e-18!54;CL:0000359!5.98e-18!32;CL:0000192!1.35e-17!42;CL:0000514!1.35e-17!42;CL:0000393!5.00e-17!60;CL:0000211!5.00e-17!60;CL:0000057!8.75e-14!75;CL:0000220!8.49e-09!246;CL:0002321!1.42e-08!248;CL:0002494!1.80e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.24e-17;32!CL:0000192;5.28e-13;43!CL:0000187;1.50e-10;55!CL:0000393;1.06e-08;61!CL:0000211;1.06e-08;61!CL:0002494;9.97e-08;16!CL:0002539;6.50e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.17e-22,121;CL:0000680,5.91e-20,58;CL:0000056,5.91e-20,58;CL:0000355,5.91e-20,58;CL:0000187,8.60e-19,55;CL:0000359,1.13e-18,32;CL:0000192,1.38e-17,43;CL:0000514,1.38e-17,43;CL:0000393,1.50e-16,61;CL:0000211,1.50e-16,61;CL:0000057,2.92e-14,76;CL:0002494,9.88e-08,16;CL:0002321,5.28e-07,250;CL:0002539,6.55e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;5.28e-13;43!CL:0000355;1.37e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!4.79e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.85e-27!79;UBERON:0007798!3.85e-27!79;UBERON:0000119!6.49e-26!312;UBERON:0004872!1.99e-25!84;UBERON:0000483!9.29e-25!309;UBERON:0000025!1.10e-24!194;UBERON:0001981!5.57e-24!60;UBERON:0007500!5.57e-24!60;UBERON:0004537!5.57e-24!60;UBERON:0006965!5.57e-24!60;UBERON:0000055!4.52e-23!69;UBERON:0001637!6.66e-23!42;UBERON:0003509!6.66e-23!42;UBERON:0004572!6.66e-23!42;UBERON:0000475!1.62e-22!365;UBERON:0004111!2.41e-21!241;UBERON:0000477!7.65e-21!286;UBERON:0004535!2.70e-20!110;UBERON:0001009!9.76e-20!113;UBERON:0000914!1.12e-19!83;UBERON:0002329!1.12e-19!83;UBERON:0003077!1.12e-19!83;UBERON:0003059!1.12e-19!83;UBERON:0007282!1.12e-19!83;UBERON:0009618!1.12e-19!83;UBERON:0007285!1.12e-19!83;UBERON:0004290!6.44e-19!70;UBERON:0001134!1.52e-18!61;UBERON:0002036!1.52e-18!61;UBERON:0003082!1.52e-18!61;UBERON:0000481!3.13e-18!347;UBERON:0002385!3.78e-18!63;UBERON:0001015!3.78e-18!63;UBERON:0000383!3.78e-18!63;UBERON:0003914!4.44e-18!118;UBERON:0004573!6.72e-18!33;UBERON:0004571!6.72e-18!33;UBERON:0000468!7.02e-15!659;UBERON:0003075!8.70e-15!86;UBERON:0007284!8.70e-15!86;UBERON:0000490!9.53e-15!138;UBERON:0000073!1.84e-14!94;UBERON:0001016!1.84e-14!94;UBERON:0002346!2.54e-14!90;UBERON:0002616!3.92e-14!59;UBERON:0005743!8.01e-14!86;UBERON:0000955!1.90e-13!69;UBERON:0006238!1.90e-13!69;UBERON:0005256!2.19e-13!143;UBERON:0001017!4.21e-13!82;UBERON:0000486!6.43e-13!82;UBERON:0000467!2.66e-12!625;UBERON:0001049!2.84e-12!57;UBERON:0005068!2.84e-12!57;UBERON:0006241!2.84e-12!57;UBERON:0007135!2.84e-12!57;UBERON:0003056!3.96e-12!61;UBERON:0000480!4.58e-12!626;UBERON:0002780!9.79e-12!41;UBERON:0001890!9.79e-12!41;UBERON:0006240!9.79e-12!41;UBERON:0000033!1.37e-11!123;UBERON:0001869!1.68e-11!32;UBERON:0003080!1.78e-11!42;UBERON:0001893!2.77e-11!34;UBERON:0000947!3.55e-11!21;UBERON:0010191!3.55e-11!21;UBERON:0002020!4.73e-11!34;UBERON:0003528!4.73e-11!34;UBERON:0002791!1.03e-10!33;UBERON:0000153!1.53e-10!129;UBERON:0007811!1.53e-10!129;UBERON:0002619!6.65e-10!22;UBERON:0004121!9.16e-10!169;UBERON:0000924!1.19e-09!173;UBERON:0006601!1.19e-09!173;UBERON:0001950!1.67e-09!20;UBERON:0000956!1.96e-09!25;UBERON:0000203!1.96e-09!25;UBERON:0000922!2.67e-09!612;UBERON:0002050!4.28e-09!605;UBERON:0005423!4.28e-09!605;UBERON:0000923!6.54e-09!604;UBERON:0005291!6.54e-09!604;UBERON:0006598!6.54e-09!604;UBERON:0002532!6.54e-09!604;UBERON:0002100!6.67e-09!216;UBERON:0000948!4.24e-08!24;UBERON:0005498!4.24e-08!24;UBERON:0004140!4.24e-08!24;UBERON:0009881!4.24e-08!24;UBERON:0004141!4.24e-08!24;UBERON:0003084!4.24e-08!24;UBERON:0007005!4.24e-08!24;UBERON:0004139!4.24e-08!24;UBERON:0004291!4.24e-08!24;UBERON:0007100!3.00e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.28e-17;42!UBERON:0003509;3.28e-17;42!UBERON:0004572;3.28e-17;42!UBERON:0004573;6.32e-17;33!UBERON:0004571;6.32e-17;33!UBERON:0007500;1.96e-13;56!UBERON:0001981;1.96e-13;56!UBERON:0004537;1.96e-13;56!UBERON:0002049;1.21e-11;75!UBERON:0007798;1.21e-11;75!UBERON:0000947;1.34e-11;21!UBERON:0010191;1.34e-11;21!UBERON:0000055;6.53e-11;65!UBERON:0001869;1.59e-10;32!UBERON:0001893;2.26e-10;34!UBERON:0003528;7.92e-10;34!UBERON:0002020;7.92e-10;34!UBERON:0002791;8.14e-10;32!UBERON:0002619;8.30e-10;22!UBERON:0001950;2.21e-09;20!UBERON:0000956;2.50e-09;25!UBERON:0000203;2.50e-09;25!UBERON:0002780;1.37e-08;41!UBERON:0001890;1.37e-08;41!UBERON:0003914;1.99e-08;74!UBERON:0000948;2.06e-07;22!UBERON:0000073;2.82e-07;53!UBERON:0002616;2.82e-07;53!UBERON:0001017;5.86e-07;75!UBERON:0004237;6.50e-07;10!UBERON:0004695;6.50e-07;10!UBERON:0002111;6.50e-07;10!UBERON:0004178;6.50e-07;10 | |||
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|phase1_expression=81.0285571546683,14.5588356245869,59.6237129325958,36.0263874071269,21.0071714380825,89.850867982338,45.5939780702959,97.284860507732,1.82829939739887,3.19454117451962,0,0.218441372130172,0.263766978228454,104.087502839399,103.727378602838,393.98253582074,297.128402315821,310.381788414634,246.406063389206,27.5791170092005,34.680117511523,2.19418305034661,5.72471974262113,8.75996320466459,11.2988375635323,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,2.76997704265939,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.4471672733735,35.5471455642927,19.3072468383731,10.843174571537,41.1097086721429,3.76600949298142,7.95285947051099,6.8128881842369,60.7858874364956,119.068686437397,92.2265249777823,88.4763654987049,0,0,0,0,0,0,0,0,151.655716820796,199.574426064621,157.601787729848,214.817017931124,265.123643684661,241.553640823379,230.521448090102,163.836225313355,209.546328722472,36.8192674041137,22.1556124410031,83.6299316290364,0.488124115096339,109.195934862723,138.534273087781,71.0825837141275,30.9850534224114,13.4007661775153,70.5256532343063,123.404535743857,63.5710051438513,0,0,0,183.879622127268,1355.45299685766,760.955562133568,326.42007441215,439.434125543764,344.816724087519,229.510340818866,248.147553707663,150.626141133487,93.3544957442938,134.365684359263,114.880287582503,415.422841550079,0.234321431833797,58.9982545209306,89.5640759824785,53.6520763180966,12.4480568562391,5.01806127541208,6.46073710830343,172.30612053913,26.2865439047183,34.7174624750572,19.0080457165129,3.21447008062124,58.2503271640337,11.4978902690598,4.88174730466792,5.25497783462249,135.484352471765,5.70670907145089,11.0335606487647,6.76071265079686,525.304440214057,50.2290979928813,46.1283959848106,57.8574090165604,30.9093828966934,29.1638657744782,44.0565323478026,41.6901758182761,105.822760315274,41.9953492244766,18.1752317455762,22.2760754714364,97.4725722617436,85.2023022039874,114.756639881282,120.727141725067,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,21.960655202339,5.39037486079926,3.02785021050754,0,7.8224766164908,25.7296375277154,15.1948413487729,30.6482832501106,33.9283356384705,0,0,0,0,0,0,0,0,0,2.95262181849859,32.2556079747925,9.4662022606222,8.82052268313252,0,0,13.5881678536723,0,3.44367627920718,172.082513729421,0.219500570817251,0,0.100528972411631,0.277765335475589,0.325808305310325,5.19967392639789,386.807996627732,34.4313302775978,443.804864211406,4.90845922387651,1.38895653772983,1.52203321787679,0,0,0.246217006087397,0,0,5.62403003920662,34.4363362807662,11.2002326821485,0,0,0.766765358330422,196.572631920481,1.40877494421162,0,0,0,0.380987365753014,0,1.17217447210047,23.9501424431787,2.98199728839638,0,0,193.426120495747,54.9309686729933,915.481821902919,270.177885933756,0,7.607724773004,245.194943491251,78.0055776835246,9.00225809917497,26.9513350844229,21.5801965003041,45.1810459959746,1.08524321078289,4.93944202068461,17.5897539518617,37.3161546179673,12.6712299669349,683.965946548201,1985.35321869147,951.143038106091,0,0,0,1729.85183179374,121.753651984161,239.630000468407,228.46490192144,228.695146998577,60.1644836486049,0,0,0,0,30.4913549066956,1.30139853857622,5.41302168944387,10.8885572467327,8.29320377149112,0,0,0,89.1967144798147,55.0187573165645,94.1289632238083,243.325907991044,94.0320770961042,28.5441371211422,387.503800795895,216.079299604502,15.9185252839189,37.2503056653018,471.60017496016,232.858259868171,39.4451609685096,17.2305018567212,15.7845974952994,0,0,0,0,8.32177197552485,7.55975733324201,145.143067573984,41.1278088412007,17.1202657604175,125.320087972076,256.365331782418,292.593282560222,78.6615752158452,74.32907241288,248.941538889004,122.533716772603,127.736589579171,64.8453911806573,14.5031339509947,0.802025881213139,0.0920809889358963,23.9962196664028,71.5618290266398,11.4078241014699,0.902399225814824,32.4234569209586,10.980896768476,0,12.6661954671451,5.68666920354483,46.9458626563183,215.915916102139,20.0495428497376,41.1838585066656,16.0540727633553,3.05851527654046,4.98645605357235,2.68649705666614,0,0,10.2580050046556,85.2838078819235,234.597822552962,1.854738209659,0,0.165018999841176,0,1.95018073810956,159.077090545718,5.22021878777459,80.4133781338444,41.2924885013288,41.0752986003901,9.23814105867153,9.28106841051063,86.3345735725102,30.0928280485972,0,0,0,0.2023155617111,398.837481297071,443.255784337541,211.202292858662,645.946417629258,522.192215740998,212.263650066318,433.473348484069,663.097600275645,170.448533166728,331.249257680506,85.0210664900259,43.7585223142381,53.0644345162061,275.882215951787,344.592453047462,33.6361495680799,11.2560182191782,25.565291309014,540.83813820862,640.381697538953,252.33381528715,0.975267478179181,615.132847829362,235.599827267565,48.184468727019,0.989838023675989,212.455259246056,291.6722667359,466.39759959457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| |||
|short_description=p1@RGS4 | |||
}} |
Revision as of 21:59, 10 January 2014
Short description: | p1@RGS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS4_5end |
Coexpression cluster: | C3897_Mesothelial_Multipotent_mesenchymal_Fibroblast_argyrophil_medial_leiomyoma |
Association with transcript: | 0bp_to_ENST00000367908, ENST00000491263, ENST00000527809, ENST00000531057_5end |
EntrezGene: | RGS4 |
HGNC: | 10000 |
UniProt: | B1APZ3A7YVV7E9PR32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.17e-22 | 121 |
muscle precursor cell | 5.91e-20 | 58 |
myoblast | 5.91e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.91e-20 | 58 |
muscle cell | 8.60e-19 | 55 |
vascular associated smooth muscle cell | 1.13e-18 | 32 |
smooth muscle cell | 1.38e-17 | 43 |
smooth muscle myoblast | 1.38e-17 | 43 |
electrically responsive cell | 1.50e-16 | 61 |
electrically active cell | 1.50e-16 | 61 |
fibroblast | 2.92e-14 | 76 |
cardiocyte | 9.88e-08 | 16 |
embryonic cell | 5.28e-07 | 250 |
aortic smooth muscle cell | 6.55e-07 | 10 |
Ontology term | p-value | n |
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