FFCP PHASE1:Hg19::chr1:156124306..156124365,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10729 | |||
|TSSclassifier=weak | |||
|UniProt=Q9H3S1 | |||
|association_with_transcript=144bp_to_ENST00000368282,uc001fno.2_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_SEMA4A_5end | |||
|id=chr1:156124306..156124365,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.84e-79!172;CL:0000566!4.84e-79!172;CL:0002032!2.62e-75!165;CL:0000837!2.62e-75!165;CL:0000988!1.40e-72!182;CL:0000738!4.27e-71!140;CL:0002087!2.38e-59!119;CL:0002031!1.83e-58!124;CL:0000763!1.27e-52!112;CL:0000049!1.27e-52!112;CL:0000766!1.86e-44!76;CL:0000557!2.07e-39!71;CL:0002009!1.11e-38!65;CL:0000839!6.18e-38!70;CL:0002194!1.19e-37!63;CL:0000576!1.19e-37!63;CL:0000040!1.19e-37!63;CL:0000559!1.19e-37!63;CL:0002057!1.16e-33!42;CL:0000860!9.07e-31!45;CL:0000542!1.11e-18!53;CL:0000051!1.11e-18!53;CL:0000838!4.05e-18!52;CL:0000945!1.59e-12!24;CL:0000826!1.59e-12!24;CL:0000134!4.72e-12!358;CL:0002320!6.87e-11!365;CL:0002393!2.60e-08!9;CL:0002397!2.60e-08!9;CL:0000094!4.73e-08!8;CL:0000451!9.93e-08!10;CL:0000219!2.80e-07!390;CL:0000236!2.96e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.19e-28;33!CL:0002057;9.19e-28;33!CL:0000473;2.91e-27;39!CL:0000234;2.91e-27;39!CL:0000576;7.28e-27;48!CL:0000766;9.35e-22;69!CL:0002087;1.57e-18;104!CL:0000738;1.93e-17;136!CL:0000763;3.74e-16;100!CL:0000945;3.31e-13;24!CL:0000988;6.99e-13;177!CL:0000542;2.14e-11;53!CL:0000094;4.96e-09;8!CL:0000451;1.13e-08;10!CL:0000990;2.53e-07;8!CL:0002393;3.87e-07;6!CL:0002397;3.87e-07;6!CL:0000219;5.56e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.32e-87,168;CL:0002032,7.94e-83,161;CL:0000837,7.94e-83,161;CL:0000988,9.95e-81,177;CL:0000738,3.16e-80,136;CL:0002087,2.48e-69,115;CL:0002031,1.33e-65,120;CL:0000763,2.01e-59,108;CL:0000049,2.01e-59,108;CL:0000766,1.75e-52,72;CL:0002009,7.73e-49,61;CL:0002194,1.13e-47,59;CL:0000576,1.13e-47,59;CL:0000040,1.13e-47,59;CL:0000559,1.13e-47,59;CL:0000557,1.39e-46,67;CL:0000839,7.74e-45,66;CL:0000473,1.77e-43,48;CL:0000234,1.77e-43,48;CL:0000860,1.61e-38,42;CL:0002057,1.61e-38,42;CL:0000542,2.45e-19,53;CL:0000051,2.45e-19,53;CL:0000838,1.05e-18,52;CL:0000134,5.73e-17,354;CL:0002320,9.80e-16,361;CL:0000945,3.05e-13,24;CL:0000826,3.05e-13,24;CL:0000219,1.46e-11,386;CL:0002393,2.49e-09,9;CL:0002397,2.49e-09,9;CL:0000094,4.97e-09,8;CL:0000451,1.17e-08,10;CL:0000990,2.60e-07,8;CL:0000236,3.03e-07,14;CL:0000048,3.07e-07,427;CL:0000034,7.97e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.85e-28;42!CL:0000049;7.26e-17;108!CL:0000051;2.14e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!2.10e-10!51;DOID:0060083!2.10e-10!51;DOID:1240!2.79e-09!39;DOID:8692!2.44e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.84e-07;39!DOID:8692;7.66e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.06e-10,51;DOID:0060083,2.06e-10,51;DOID:1240,9.47e-09,39;DOID:8692,4.54e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.61e-43!102;UBERON:0003061!2.61e-43!102;UBERON:0002193!2.51e-38!112;UBERON:0002371!6.40e-34!80;UBERON:0001474!2.85e-29!86;UBERON:0002405!1.42e-25!115;UBERON:0007023!8.53e-24!115;UBERON:0004765!1.32e-21!101;UBERON:0001434!1.32e-21!101;UBERON:0003081!2.07e-10!216;UBERON:0002384!1.22e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.62e-07;15!UBERON:0000179;1.62e-07;15!UBERON:0000463;1.62e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.67e-52,98;UBERON:0003061,8.67e-52,98;UBERON:0002193,1.51e-46,108;UBERON:0002371,1.22e-40,76;UBERON:0002405,1.91e-39,93;UBERON:0001474,1.43e-35,82;UBERON:0004765,6.23e-30,90;UBERON:0001434,5.09e-25,100;UBERON:0007023,1.65e-16,114;UBERON:0003081,6.02e-15,203;UBERON:0002384,2.02e-14,371;UBERON:0002204,1.26e-07,167;UBERON:0000178,1.62e-07,15;UBERON:0000179,1.62e-07,15;UBERON:0000463,1.62e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,0,0,0,0,0,0,0,0,0,33.0105912831149,32.7581351905284,34.0030575275094,107.388447579751,70.6246092498871,146.76568490364,0,0.90361775633475,0.739508020333575,10.9228752818225,21.4675541056007,29.9472448121544,161.212663882776,126.9446352486,127.819402851637,40.7526163116662,49.8796245669228,45.8484510388852,113.846820964399,115.630038768776,108.435075350954,160.840893538734,127.050877398744,80.2139500618318,118.816958029048,122.44481772091,81.8228515414505,103.768449901722,99.4046412719092,75.8388324928314,127.063579191258,96.8816832705352,80.0015604624501,138.96208713639,120.669314180611,92.703883240861,128.312155772633,135.236359867466,102.720164878379,187.184958915437,167.946026508577,113.97647156619,110.046915382454,125.677383339269,86.8755378820467,158.009270187309,156.886272930703,113.609997091278,147.033679273111,141.381859476754,131.455970733752,160.517613908342,154.982553412435,123.27652499666,70.3981477040884,63.6533367037088,79.824235195145,17.5996244461323,16.3841583378639,12.4531295540898,24.3236226862909,15.2150475073685,19.5415829584524,15.8650769468367,10.494591299889,13.0918982895173,11.1575065980478,10.3213771593812,10.5737062863221,17.9362740154092,24.2313357993071,0.196709770113833,0.786021525498329,1.43921049299656,0,0,0,0,5.12488101671798,1.17842362989935,0.886135578334485,1.08321545506006,7.42929654408916,5.46249259751489,1.47994114143309,1.93445012450094,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,1.92625882585863,1.91610246800961,2.06176467289578,2.02415753615602,3.18565414324097,7.1619179924206,7.60361635558699,8.13105643019973,7.55121005811069,23.7368380449457,11.1285308460688,6.56902397536837,7.05623601286563,4.27904313253612,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0.175669571386252,3.92937226493138,0.364295288292542,0.370784442784429,30.5074550035402,36.5672448328461,24.0653908539146,38.8739717617707,54.9115114348923,37.8886651356156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,227.980122164389,302.468606035694,0,0,0,0.132409180813219,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,1.77236972004421,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,49.4896182235669,34.3986269754679,67.3299165167939,0,0,0,0,0,0,1.47798971368783,4.13827639862162,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,97.2990245129524,134.60490050381,130.71704247948,0,0,0,0,0,0,43.4890358694886,18.3238606987792,1.2937654491571,10.6524720112191,0,0,0,0.335032530668698,0,232.192177423627,305.144688388105,415.658759976344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.2070629748109,69.4599726635946,55.0714198265773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693138033939733,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,1.00337954770971,3.05851527654046,1.66215201785745,0.447749509444357,1.97333888981341,1.5686127061494,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0.426133137080504,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,2.82431402330337,0,0,0,0,68.5054272463429,72.6405346785257,80.8899005787311,81.7134989820216,84.740628255756,94.028630122944,74.5243383388598,63.4500141035416,0,0,0,39.2044699515266,0.865615277858669,0,3.82623054549174,5.18906365725323,9.7667738767507,127.00414963433,24.3466455205917,74.1304550219531,13.9223154210247,36.3497358193414,30.0761372508081,1.86220955581764,17.5041001863032,25.8303625204541,30.6609291137035,17.518772582544,23.3502980874428,34.6697967233245,26.5290135321935,29.112826214904,0.556812347790485,0,0,2.66457574398256,1.4098700508785,0,1.31857361344705,0,12.81598919191,0,0,5.3453642549875,0,0.994147647766298,1.1253553312841,0,0,0,2.98871982376605,39.232316005423,0,0.102268682502155,43.9412755496018,0,0,0,73.6664213126695,3.94573622547734,62.2656040102043,0,1.93866549219044,2.31920245404628,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0.110579259931225,0,0.87754158861589,0,0,1.76985594558733,0,0,0,0,2.23300811812344,0.0915975934018623,4.26427820814908,4.08773192782946,3.29658538429552,2.82559859230266,0,0,0,0,0.476809736941136,0,0,0,0,7.96209544862804,3.27292988662355,6.11030144933625,0,0,0,0.67401132980677,4.81546588379273,0.234264445725339,2.91927662745066,0,0.242780379534093,0,2.41981432097328,2.14250933141343,17.3131228182057,0,0,0,0,0,0,7.6844577428044,0,0,0,0,4.19344003780872,0,0,0.146178634172371,0,2.13375836274523,0,0.677942222341597,0,0,1.96263467463224,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,2.60120219894787,83.035282243532,0,9.72683210833464,1.95497680890578,0,2.15361907373044,0.998395002494955,1.71690419254628,5.13294352116307,2.62015542698232,0,0,0,0,0.067403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| |||
|short_description=p1@SEMA4A | |||
}} |
Revision as of 21:24, 10 January 2014
Short description: | p1@SEMA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA4A_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 144bp_to_ENST00000368282, uc001fno.2_5end |
EntrezGene: | SEMA4A |
HGNC: | 10729 |
UniProt: | Q9H3S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.67e-52 | 98 |
blood island | 8.67e-52 | 98 |
hemolymphoid system | 1.51e-46 | 108 |
bone marrow | 1.22e-40 | 76 |
immune system | 1.91e-39 | 93 |
bone element | 1.43e-35 | 82 |
skeletal element | 6.23e-30 | 90 |
skeletal system | 5.09e-25 | 100 |
adult organism | 1.65e-16 | 114 |
lateral plate mesoderm | 6.02e-15 | 203 |
connective tissue | 2.02e-14 | 371 |
musculoskeletal system | 1.26e-07 | 167 |
blood | 1.62e-07 | 15 |
haemolymphatic fluid | 1.62e-07 | 15 |
organism substance | 1.62e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.06e-10 | 51 |
immune system cancer | 2.06e-10 | 51 |
leukemia | 9.47e-09 | 39 |
myeloid leukemia | 4.54e-07 | 31 |