FFCP PHASE1:Hg19::chr1:152006234..152006259,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10488 | |||
|TSSclassifier=strong | |||
|UniProt=P31949 | |||
|association_with_transcript=17bp_to_AB464185,BT009912,DQ891746,DQ894925_5end | |||
|description=CAGE_peak_4_at_S100A11_5end | |||
|id=chr1:152006234..152006259,- | |||
|ontology_enrichment_celltype=CL:0000548!4.87e-25!679;CL:0000004!4.87e-25!679;CL:0000255!4.87e-25!679;CL:0000012!2.35e-24!682;CL:0000003!1.19e-18!722;CL:0002194!1.35e-18!63;CL:0000576!1.35e-18!63;CL:0000040!1.35e-18!63;CL:0000559!1.35e-18!63;CL:0000766!1.37e-18!76;CL:0002009!1.72e-18!65;CL:0000063!1.76e-18!578;CL:0000860!2.55e-18!45;CL:0000144!4.64e-18!625;CL:0002057!1.18e-17!42;CL:0002371!1.54e-17!591;CL:0000557!6.49e-16!71;CL:0000839!3.64e-15!70;CL:0000066!1.91e-08!254;CL:0000763!4.68e-07!112;CL:0000049!4.68e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-20;33!CL:0002057;1.08e-20;33!CL:0000473;2.50e-19;39!CL:0000234;2.50e-19;39!CL:0000576;2.21e-11;48!CL:0000766;4.57e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.29e-22,48;CL:0000234,9.29e-22,48;CL:0000860,7.71e-19,42;CL:0002057,7.71e-19,42;CL:0002194,1.65e-18,59;CL:0000576,1.65e-18,59;CL:0000040,1.65e-18,59;CL:0000559,1.65e-18,59;CL:0002009,2.09e-18,61;CL:0000766,1.19e-17,72;CL:0000557,4.20e-15,67;CL:0000839,1.57e-14,66;CL:0000066,8.04e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;6.74e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.48e-17!167;UBERON:0000926!4.02e-16!448;UBERON:0004120!4.02e-16!448;UBERON:0006603!4.02e-16!448;UBERON:0002371!5.79e-16!80;UBERON:0003081!1.39e-14!216;UBERON:0004765!4.02e-14!101;UBERON:0001434!4.02e-14!101;UBERON:0001474!9.50e-14!86;UBERON:0002390!2.86e-10!102;UBERON:0003061!2.86e-10!102;UBERON:0002193!6.80e-10!112;UBERON:0002405!5.38e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.68e-16,167;UBERON:0002371,3.87e-15,76;UBERON:0001474,4.92e-13,82;UBERON:0000926,7.84e-13,315;UBERON:0004120,7.84e-13,315;UBERON:0006603,7.84e-13,315;UBERON:0001434,1.25e-12,100;UBERON:0004765,2.69e-12,90;UBERON:0002405,1.83e-10,93;UBERON:0003081,4.27e-10,203;UBERON:0002390,2.75e-08,98;UBERON:0003061,2.75e-08,98;UBERON:0002193,1.62e-07,108 | |||
|phase1_expression=4.54195948176392,5.1384125733836,2.96004248601539,5.00366491765652,3.12872766099101,0.872338524100369,0,0.631719873426831,1.30592814099919,0.245733936501509,4.88460817580699,6.11635841964482,6.06664049925443,0.74259811776028,0.994192127183747,4.70627602516243,2.41077811209591,2.19093027116212,4.39139518911456,1.35433163884467,1.02000345622126,1.56727360739044,0,0.958120975510189,0.627713197974014,0.0764134057479513,0,0.157421562627358,1.18009283054671,0.383829398097213,1.08371286321253,2.75826367343678,4.819294700452,8.8740962440029,0,0,0,1.10799081706375,0.401088894940283,0.651032612147555,0.447830948479849,1.94336199611388,3.34848237924443,11.1956643860265,11.7141542543531,10.6736986922639,10.9241647345672,9.45686142450199,5.26500830521676,9.20615655430881,9.99026755463492,6.85798466676897,7.58440497620561,5.16387746867061,4.06279459783025,13.5534484470675,13.0994952027766,8.09004544002305,9.18251677112708,7.38136762275015,3.83602275479425,6.59702600373432,10.5715738539465,9.37694451171927,14.8006711700578,9.64554881974938,12.4564449799115,11.0549412712967,8.34372669472322,4.99534342821768,6.65939452896706,6.62899744777616,7.91155968602211,3.80259515361495,2.33864729961548,1.46761051855863,2.02191536063691,3.00353785683013,4.018139667427,1.99508920618874,1.9891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0.501559486172034,0,0,0,1.78256731016278,0.294605907474837,0.443067789167242,0.812411591295047,1.28091319725675,1.04047478047903,1.64437904603676,0.276350017785848,2.02862160014537,0.14828656316206,0.267540828089713,0,0.906474741580529,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0,0,0.144824403882799,4.87613732627923,2.01210257911091,0.639312809217652,1.44575660953827,1.50401373190767,1.73815822752988,1.5905718941022,0.973269740605272,0.472674085820339,1.33037638477538,1.14185221401064,0.196468613246569,4.37154345951051,3.33705998505986,2.27183175558278,2.61194605948901,3.45690697349049,0,0.571994910780128,0,0.596287222100115,0,1.04142150482278,0,2.09749718104953,0.550236083880135,1.46296476575767,0.775250277507987,1.42306505074684,0.66944122552934,1.20848795132744,1.52054421143703,1.46437234528902,0,2.43042584364528,0.535798369704479,0.44905874525234,0.788280363383256,0,0.949265659568129,0.366403487860815,3.9534125230819,7.75560528296651,4.36094052142534,6.95760732373446,2.91250176828533,0.926864265692532,1.43418310374407,3.19201543978521,2.24271040056923,0,2.22000793575444,0.933633106199299,1.21239604862719,0.326923806226917,3.17850598054356,2.88087962239999,0.937285727335186,0.624320153660641,0.570471821544449,1.79338416662161,1.64408298101271,1.29498355494505,0.98315564691574,0.816616685019573,0.859840221182376,1.75653827998801,1.18800285728205,5.19260551484969,3.64064544775211,1.43723628363248,1.68336113954066,0.750711119231785,1.38532057742091,3.95079858792754,6.43624371177941,2.40380894250555,1.24775401476023,1.79389635688862,1.92201649936711,2.54318281391474,0.600182192168805,2.57631323096097,0.257640540045629,1.30281799432113,0.168776332241266,2.92311015483596,1.51460264546469,1.47279837827679,2.42469085228218,2.4850671476163,2.51880245569101,1.18692414617341,4.25173876959253,7.9096374971342,7.1701148847251,0,0.132529768321485,0.69716365721711,0.518305275076852,0.756962552626885,0,0,2.57296375277154,1.38134921352481,1.85747171212792,2.16563844500876,2.60274960087657,3.54027849164014,3.37415441836875,2.64705534557745,1.52515610864684,3.08451804844426,2.96628877952362,2.74710051175484,5.00171304030308,4.42893272774789,0,0.4115740113314,0,0,0,0,0,0.368965315629341,1.54411029268673,6.14601598288303,1.1240175325762,4.62433273093502,2.22212268380471,0.651616610620649,0,2.88662684050547,0.463721619900307,0.821860859650752,0.866198686566443,1.38895653772983,0.380508304469197,2.37061319387782,3.43394464837949,1.96973604869918,4.91408956792399,2.97262324577457,2.81201501960331,2.18376766658517,2.69372684760534,2.50763863567975,3.77824120068151,3.83382679165211,1.47798971368783,0.792435906119034,0.414656231081544,0.576479813667846,0.6312121671319,0.317489471460845,2.29193055334967,1.17217447210047,5.13217338068116,1.23392991243988,1.20137223137567,0.571652865261156,1.34557301214433,1.74384027533312,1.466765716419,4.26596662000667,0,0,2.39344304926383,2.08014873822732,1.28603687131071,1.41849132023278,1.3321108950805,0.714889968290738,0.542621605391443,2.46972101034231,0.977208552881205,0,0.791951872933429,1.50719688529793,2.61460037580088,3.19913571782583,6.08118903205952,7.03159928004977,23.1917333431335,3.11512312139057,1.14861935834114,1.42636905040718,1.88215698667853,1.43833425785268,2.32779252211864,0.448340575974109,0,0.646882724578552,0.256686072559497,1.01637849688985,0,0,0.335032530668698,0.637938751653163,12.7331194071021,20.9413021442817,12.018049889645,0.24538298343828,1.00034104211935,1.35632511849868,1.03985430765404,7.13715955188647,3.94256037584837,2.92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| |||
|short_description=p4@S100A11 | |||
}} |
Revision as of 20:54, 10 January 2014
Short description: | p4@S100A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_S100A11_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_AB464185, BT009912, DQ891746, DQ894925_5end |
EntrezGene: | S100A11 |
HGNC: | 10488 |
UniProt: | P31949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.29e-22 | 48 |
phagocyte | 9.29e-22 | 48 |
classical monocyte | 7.71e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.71e-19 | 42 |
monopoietic cell | 1.65e-18 | 59 |
monocyte | 1.65e-18 | 59 |
monoblast | 1.65e-18 | 59 |
promonocyte | 1.65e-18 | 59 |
macrophage dendritic cell progenitor | 2.09e-18 | 61 |
myeloid leukocyte | 1.19e-17 | 72 |
granulocyte monocyte progenitor cell | 4.20e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.57e-14 | 66 |
epithelial cell | 8.04e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.68e-16 | 167 |
bone marrow | 3.87e-15 | 76 |
bone element | 4.92e-13 | 82 |
mesoderm | 7.84e-13 | 315 |
mesoderm-derived structure | 7.84e-13 | 315 |
presumptive mesoderm | 7.84e-13 | 315 |
skeletal system | 1.25e-12 | 100 |
skeletal element | 2.69e-12 | 90 |
immune system | 1.83e-10 | 93 |
lateral plate mesoderm | 4.27e-10 | 203 |
hematopoietic system | 2.75e-08 | 98 |
blood island | 2.75e-08 | 98 |
hemolymphoid system | 1.62e-07 | 108 |