FFCP PHASE1:Hg19::chr1:149897719..149897733,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1002 | |||
|description=CAGE_peak_at_chr1:149897719..149897733,- | |||
|id=chr1:149897719..149897733,- | |||
|ontology_enrichment_celltype=CL:0000003!3.87e-19!722;CL:0000548!1.49e-16!679;CL:0000004!1.49e-16!679;CL:0000255!1.49e-16!679;CL:0000055!6.22e-16!180;CL:0000012!6.29e-16!682;CL:0002371!2.81e-14!591;CL:0000144!4.33e-12!625;CL:0000220!3.45e-11!246;CL:0002321!1.10e-10!248;CL:0000183!4.85e-09!59;CL:0000680!7.25e-08!57;CL:0000056!7.25e-08!57;CL:0000355!7.25e-08!57;CL:0000393!7.57e-08!60;CL:0000211!7.57e-08!60;CL:0000222!1.13e-07!119;CL:0000187!1.20e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.18e-08,250;CL:0000393,4.87e-08,61;CL:0000211,4.87e-08,61;CL:0000680,1.02e-07,58;CL:0000056,1.02e-07,58;CL:0000355,1.02e-07,58;CL:0000187,1.13e-07,55;CL:0000222,5.09e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.87e-10!110;UBERON:0000490!1.81e-09!138;UBERON:0001009!2.35e-09!113;UBERON:0000486!1.53e-08!82;UBERON:0005256!4.18e-08!143;UBERON:0004290!6.20e-08!70;UBERON:0000914!1.31e-07!83;UBERON:0002329!1.31e-07!83;UBERON:0003077!1.31e-07!83;UBERON:0003059!1.31e-07!83;UBERON:0007282!1.31e-07!83;UBERON:0009618!1.31e-07!83;UBERON:0007285!1.31e-07!83;UBERON:0002049!2.68e-07!79;UBERON:0007798!2.68e-07!79;UBERON:0001134!9.63e-07!61;UBERON:0002036!9.63e-07!61;UBERON:0003082!9.63e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.28e-11,109;UBERON:0001009,2.27e-10,112;UBERON:0000490,1.31e-09,148;UBERON:0000486,1.45e-08,83;UBERON:0007503,6.37e-08,78;UBERON:0002329,1.15e-07,71;UBERON:0003059,1.15e-07,71;UBERON:0007282,1.15e-07,71;UBERON:0004290,1.15e-07,71;UBERON:0009618,1.15e-07,71;UBERON:0007524,1.19e-07,73;UBERON:0003077,2.19e-07,72;UBERON:0007285,2.19e-07,72;UBERON:0002100,3.03e-07,199;UBERON:0001134,3.37e-07,62;UBERON:0002036,3.37e-07,62;UBERON:0003082,3.37e-07,62;UBERON:0002049,3.41e-07,78;UBERON:0007798,3.41e-07,78;UBERON:0003104,4.89e-07,160;UBERON:0009142,4.89e-07,160;UBERON:0005256,9.52e-07,122 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0,2.45733936501509,0.697801167972428,4.15038607047327,0.263766978228454,5.07442047136191,0.331397375727916,0,0,0,0.487932798790507,9.35720041383588,3.26401105990805,3.76145665773705,8.30084362680065,1.77936752594749,1.75759695432724,1.22261449196722,0.985207073399349,1.25937250101887,0,0.767658796194425,0,0,1.204823675113,0.739508020333575,6.11990884584383,3.83856927716038,0,1.66198622559563,0,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.619412741790207,0.575384784644301,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0,0.898893937780338,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,1.0429658368404,0,0,0.368277635987565,0.632924774881769,0.633765858935825,0,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0,1.75996244461323,1.09227722252426,0.889509253863555,0,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0,1.52909291250092,0,0,0.526768169550154,0.590129310341499,0,0,6.35308682484577,0,0,0,5.57052284425868,1.17842362989935,0.664601683750863,1.62482318259009,1.66518715643378,1.69077151827842,1.64437904603676,2.48715016007264,4.63684937176084,0,0,0,5.21222976408804,0.766440987203842,1.37450978193052,0.759059076058509,0.637130828648193,0.651083453856419,0,0.301150238155546,0.639933055772092,0,0.710331756132051,0,0.201606743224732,0,0.289648807765598,0,3.35350429851818,4.2194645408365,5.78302643815306,3.00802746381534,1.30361867064741,0.795285947051099,2.43317435151318,4.72674085820339,0.443458794925128,0.614843499851882,0.654895377488563,7.65020105414339,1.11235332835329,0,0,0.132957960518865,0.238490624305342,1.71598473234038,0,5.76410981363445,0,1.38856200643038,1.13061588384802,3.35599548967925,0.550236083880135,2.92592953151535,2.06733407335463,3.5576626268671,3.68192674041137,1.61131726843659,1.52054421143703,0.732186172644509,1.10298924103761,2.43042584364528,2.67899184852239,0.673588117878509,0.450445921933289,4.5994991239765,2.84779697870439,1.28241220751285,2.63560834872127,0,6.10531672999548,1.98788780678127,1.39293562831038,0.397227542439656,0.860509862246441,0.709336764396714,1.12135520028461,6.4049397437823,0.24666754841716,9.33633106199299,0.538842688278752,0.980771418680752,5.75158225050739,0.576175924479999,4.45210720484214,0.936480230490962,5.13424639390004,0.747243402759005,1.05691048779388,1.45685649931318,0.98315564691574,2.44985005505872,1.35117749042945,1.23990937410919,2.37600571456411,0.741800787835671,8.19145225744224,2.87447256726495,1.17835279767846,1.7516592782075,4.71008996323111,0,1.22595118319608,0.600952235626387,1.02088964844019,0.717558542755448,1.70845911054854,1.48352330811693,0.300091096084402,4.01904864029912,0,3.90845398296339,0.168776332241266,2.43592512902997,0,3.12969655383818,2.7479829659198,0,2.61955455391865,2.7129694769678,1.35282597214308,1.63647672354501,1.14721838155602,0.121973706129595,0,0.116193942869518,0.207322110030741,0.504641701751257,0,1.56449532329816,1.28648187638577,1.38134921352481,1.85747171212792,0,0.591534000199219,0.505754070234305,0.241011029883482,0.661763836394364,0.435758888184812,0.474541238222193,0.269662616320329,1.17732879075208,0.769494313892781,0.738155454624648,1.40241773803446,4.115740113314,1.47008711385542,0,0,0,0.882926198829301,2.58275720940538,1.71567810298526,0.329250856225877,4.49607013030478,0.703702806881416,1.75918045801206,3.25808305310325,2.07986957055916,1.44331342025273,7.41954591840492,2.46558257895225,1.87676382089396,0.462985512576611,0.380508304469197,8.69224837755203,6.86788929675898,0,0,0,0,0.503946384596579,0.708875486211932,1.34337784054272,0.581267877027924,0.383382679165211,3.4486426652716,0.792435906119034,0,0,0,0.380987365753014,1.90994212779139,5.86087236050235,0,0.205654985406647,0.300343057843917,0.285826432630578,4.48524337381443,1.30788020649984,2.7868548611961,1.03417372606222,53.6484668777824,0,2.92531928243358,0,1.54324424557285,0,0.266422179016099,3.43147184779554,8.68194568626309,0,0.65147236858747,1.42156779497018,0,0.301439377059586,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,1.01346914667305,0.61642896765115,1.79060963239896,3.36255431980582,0.591092280605782,0.215627574859517,0.385029108839245,8.13102797511883,5.20559415430487,1.54657762555539,1.67516265334349,2.55175500661265,4.49404214368309,0,0.828831026872071,5.15304265220388,2.00068208423871,0.542530047399471,0.831883446123229,1.24900292158013,0.946214490203608,0.234282829985426,0.300946099727719,0,1.03473071292505,0.664225598535437,1.84369168541703,3.82287903659565,11.1606659753762,3.0882908142977,0.206768026122887,0.215714200818617,0.213455115606889,0.909382714338778,1.66435439510497,0.907170879989041,0.496215615637554,0,0,0.896974044789907,0.511707249066704,0.482561763430822,0,1.54209693802656,0.887808626565635,2.54594183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| |||
|short_description=p@chr1:149897719..149897733,- | |||
}} |
Revision as of 20:37, 10 January 2014
Short description: | p@chr1:149897719..149897733, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:149897719..149897733, - |
Coexpression cluster: | C1002_Mesenchymal_Whole_Smooth_Renal_osteosarcoma_Fibroblast_Reticulocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.18e-08 | 250 |
electrically responsive cell | 4.87e-08 | 61 |
electrically active cell | 4.87e-08 | 61 |
muscle precursor cell | 1.02e-07 | 58 |
myoblast | 1.02e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-07 | 58 |
muscle cell | 1.13e-07 | 55 |
mesodermal cell | 5.09e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.28e-11 | 109 |
circulatory system | 2.27e-10 | 112 |
unilaminar epithelium | 1.31e-09 | 148 |
multilaminar epithelium | 1.45e-08 | 83 |
epithelial vesicle | 6.37e-08 | 78 |
somite | 1.15e-07 | 71 |
presomitic mesoderm | 1.15e-07 | 71 |
presumptive segmental plate | 1.15e-07 | 71 |
dermomyotome | 1.15e-07 | 71 |
trunk paraxial mesoderm | 1.15e-07 | 71 |
dense mesenchyme tissue | 1.19e-07 | 73 |
paraxial mesoderm | 2.19e-07 | 72 |
presumptive paraxial mesoderm | 2.19e-07 | 72 |
trunk | 3.03e-07 | 199 |
skeletal muscle tissue | 3.37e-07 | 62 |
striated muscle tissue | 3.37e-07 | 62 |
myotome | 3.37e-07 | 62 |
vasculature | 3.41e-07 | 78 |
vascular system | 3.41e-07 | 78 |
mesenchyme | 4.89e-07 | 160 |
entire embryonic mesenchyme | 4.89e-07 | 160 |
trunk mesenchyme | 9.52e-07 | 122 |