FFCP PHASE1:Hg19::chr1:142539672..142539687,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chr1:142539672..142539687,- | |||
|id=chr1:142539672..142539687,- | |||
|ontology_enrichment_celltype=CL:0000047!1.72e-13!8;CL:0002195!2.74e-09!2;CL:0002571!2.74e-09!2;CL:0000540!4.88e-07!6;CL:0000031!4.88e-07!6;CL:0000404!4.88e-07!6;CL:0000214!9.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.98e-41;2!CL:0000214;2.72e-27;3!CL:0000540;2.11e-14;6!CL:0000404;2.11e-14;6!CL:0002319;2.84e-12;25!CL:0000153;8.84e-10;9!CL:0000447;8.84e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.88e-40,8;CL:0000214,2.08e-27,3;CL:0000540,2.18e-14,6;CL:0000031,2.18e-14,6;CL:0000404,2.18e-14,6;CL:0002319,2.88e-12,25;CL:0000153,8.09e-10,9;CL:0000447,8.09e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!CL:0000031;2.11e-14;6!UBERON:0003056;7.50e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006331!1.14e-11!3;UBERON:0002148!2.54e-08!2;UBERON:0009662!2.54e-08!2;UBERON:0006915!9.09e-07!3;UBERON:0002018!9.09e-07!3;UBERON:0002217!9.09e-07!3;UBERON:0007616!9.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.72e-27;3!UBERON:0007616;2.72e-27;3!UBERON:0002217;2.72e-27;3!UBERON:0002018;2.72e-27;3!UBERON:0002146;6.98e-21;1!UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0005623;6.98e-21;1!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2!UBERON:0004905;6.94e-11;8!UBERON:0000982;6.94e-11;8!UBERON:0004770;6.94e-11;8!UBERON:0004457;8.84e-10;9!UBERON:0000042;8.84e-10;9!UBERON:0003978;7.50e-08;3!UBERON:0000946;7.50e-08;3!UBERON:0000486;1.47e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.08e-27,3;UBERON:0007616,2.08e-27,3;UBERON:0002217,2.08e-27,3;UBERON:0002018,2.08e-27,3;UBERON:0000941,6.31e-21,1;UBERON:0001785,6.31e-21,1;UBERON:0002464,6.31e-21,1;UBERON:0004904,6.31e-21,1;UBERON:0001021,6.31e-21,1;UBERON:0003902,6.31e-21,1;UBERON:0005425,6.31e-21,1;UBERON:0002146,7.72e-21,1;UBERON:0005623,7.72e-21,1;UBERON:0003714,3.70e-11,2;UBERON:0005162,3.70e-11,2;UBERON:0000122,3.70e-11,2;UBERON:0004905,6.29e-11,8;UBERON:0000982,6.29e-11,8;UBERON:0004770,6.29e-11,8;UBERON:0003978,7.76e-08,3;UBERON:0009751,7.76e-08,3;UBERON:0000946,7.76e-08,3;UBERON:0002523,7.76e-08,3;UBERON:0005983,7.76e-08,3;UBERON:0002165,7.76e-08,3;UBERON:0002062,7.76e-08,3;UBERON:0007280,7.76e-08,3;UBERON:0004457,1.37e-07,12;UBERON:0000042,1.37e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,3.30323011489202,5.20559415430487,4.63973287666617,0.670065061337395,22.9657950595139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,4.93942339439853,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494255755786011,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3749625440701,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:142539672..142539687,- | |||
}} |
Revision as of 20:26, 10 January 2014
Short description: | p@chr1:142539672..142539687, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:142539672..142539687, - |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.88e-40 | 8 |
synovial cell | 2.08e-27 | 3 |
neuron | 2.18e-14 | 6 |
neuroblast | 2.18e-14 | 6 |
electrically signaling cell | 2.18e-14 | 6 |
neural cell | 2.88e-12 | 25 |
GAG secreting cell | 8.09e-10 | 9 |
carbohydrate secreting cell | 8.09e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.08e-27 | 3 |
layer of synovial tissue | 2.08e-27 | 3 |
synovial joint | 2.08e-27 | 3 |
synovial membrane of synovial joint | 2.08e-27 | 3 |
cranial nerve II | 6.31e-21 | 1 |
cranial nerve | 6.31e-21 | 1 |
nerve trunk | 6.31e-21 | 1 |
nerve connecting eye with brain | 6.31e-21 | 1 |
nerve | 6.31e-21 | 1 |
retinal neural layer | 6.31e-21 | 1 |
presumptive neural retina | 6.31e-21 | 1 |
pulmonary valve | 7.72e-21 | 1 |
semi-lunar valve | 7.72e-21 | 1 |
neural tissue | 3.70e-11 | 2 |
multi cell component structure | 3.70e-11 | 2 |
neuron projection bundle | 3.70e-11 | 2 |
articulation | 6.29e-11 | 8 |
skeletal joint | 6.29e-11 | 8 |
articular system | 6.29e-11 | 8 |
valve | 7.76e-08 | 3 |
cardiac mesenchyme | 7.76e-08 | 3 |
cardial valve | 7.76e-08 | 3 |
tunica intima | 7.76e-08 | 3 |
heart layer | 7.76e-08 | 3 |
endocardium | 7.76e-08 | 3 |
endocardial cushion | 7.76e-08 | 3 |
presumptive endocardium | 7.76e-08 | 3 |
cavity lining | 1.37e-07 | 12 |
serous membrane | 1.37e-07 | 12 |