FFCP PHASE1:Hg19::chr19:8576745..8576781,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:8576745..8576781,- | |||
|id=chr19:8576745..8576781,- | |||
|ontology_enrichment_celltype=CL:0002368!6.54e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.26e-15;13!CL:0000039;7.18e-14;7!CL:0000586;7.18e-14;7!CL:0002202;1.50e-10;9!CL:0002632;1.50e-10;9!CL:0000322;6.92e-09;3!CL:0002553;1.75e-07;1!CL:0000082;1.82e-07;19!CL:0002252;7.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.48e-15,13;CL:0000039,8.91e-14,7;CL:0000586,8.91e-14,7;CL:0002202,1.86e-10,9;CL:0002632,1.86e-10,9;CL:0000322,6.66e-09,3;CL:0000082,1.83e-07,19;CL:0002553,1.86e-07,1;CL:0002252,5.45e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-08!115;UBERON:0002619!6.16e-08!22;UBERON:0001950!9.84e-08!20;UBERON:0002020!2.28e-07!34;UBERON:0003528!2.28e-07!34;UBERON:0001869!4.82e-07!32;UBERON:0002616!7.59e-07!59;UBERON:0003101!9.45e-07!22;UBERON:0000079!9.45e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;4.78e-09;22!UBERON:0000117;4.78e-09;22!UBERON:0000171;4.78e-09;22!UBERON:0000170;4.78e-09;22!UBERON:0004821;6.92e-09;3!UBERON:0007499;6.92e-09;3!UBERON:0003215;6.92e-09;3!UBERON:0010368;6.92e-09;3!UBERON:0009911;6.92e-09;3!UBERON:0002299;6.92e-09;3!UBERON:0006524;6.92e-09;3!UBERON:0008874;6.92e-09;3!UBERON:0002169;6.92e-09;3!UBERON:0004894;6.92e-09;3!UBERON:0005178;1.17e-08;34!UBERON:0002224;1.17e-08;34!UBERON:0005181;1.43e-08;35!UBERON:0004802;1.82e-07;19!UBERON:0000115;1.82e-07;19!UBERON:0000473;2.08e-07;8!UBERON:0002171;2.23e-07;1!UBERON:0006518;2.23e-07;1!UBERON:0008949;2.23e-07;1!UBERON:0000101;2.23e-07;1!UBERON:0002167;2.23e-07;1!UBERON:0000065;2.59e-07;44!UBERON:0009856;7.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,9.25e-10,34;UBERON:0002224,9.25e-10,34;UBERON:0005181,1.90e-09,35;UBERON:0002048,4.72e-09,22;UBERON:0000117,4.72e-09,22;UBERON:0000171,4.72e-09,22;UBERON:0000170,4.72e-09,22;UBERON:0005597,4.72e-09,22;UBERON:0000118,4.72e-09,22;UBERON:0004821,6.66e-09,3;UBERON:0003215,6.66e-09,3;UBERON:0010368,6.66e-09,3;UBERON:0009911,6.66e-09,3;UBERON:0002299,6.66e-09,3;UBERON:0006524,6.66e-09,3;UBERON:0008874,6.66e-09,3;UBERON:0002169,6.66e-09,3;UBERON:0004894,6.66e-09,3;UBERON:0000915,1.56e-07,52;UBERON:0004802,1.83e-07,19;UBERON:0000115,1.83e-07,19;UBERON:0000473,2.08e-07,8;UBERON:0002171,2.10e-07,1;UBERON:0006518,2.10e-07,1;UBERON:0008949,2.10e-07,1;UBERON:0000101,2.10e-07,1;UBERON:0002167,2.10e-07,1;UBERON:0000065,2.88e-07,54;UBERON:0005153,7.09e-07,37;UBERON:0005157,8.63e-07,47 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,2.94880723801811,17.4450291993107,0,0,0,0,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0.523916301990851,0.364295288292542,2.96627554227544,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,1.74437620857014,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0,1.24864030732128,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.487894824518382,0.265059536642971,2.67246068599892,0.725627385107593,1.26160425437814,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,1.97550513735526,0,0.904760751704678,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.425325291727159,0,0,0.383382679165211,0,0.088048434013226,0.829312462163088,1.00883967391873,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0.532685175939381,0.0821271560138091,0,0,0,0.601519410909855,0.184161977871793,0.114814448164607,0,0.524497659837696,0,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0.267096106940212,1.32227932288782,0.576570202095319,0.255225424989168,4.95673126192195,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0.7133421029625,0,0,0.658589785919804,0.379473173765715,0,0.48111056362756,0,2.17781969722645,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,1.9882952955326,0.844016498463076,0,0,0.211125408127993,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.278304294485554,0,0,0,0,3.07242310370849,3.0510438035132,1.89110145414349,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0,0.10893846351899,0.41827123283581,0.307801034015188,0,0,0,1.08647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0.34945333648406,0,0.0967563312890851,0,0,0.290967049465258,0.176512253383001,0,0,0,0.189932387867636,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49823746722733,0.482259445395058,0.412618309791701,0.83088067605837,0,0,0.121499113316049,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0.26446520348538,0.171086837884329,0,0,0.628817220398664,3.31391244277756,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0.314531883711793,0.109209638192014,0.169732529954025,0.212574920101683,0.371807292777007,0,0,0,4.80342448971282,0,0,0,0,0.638535436228605,1.23069818544453,0.504143392443436,0.138314504928436,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.826747186004736,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0.40781839786099,0.197318320688547,2.2456829767954,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0.116241425368125,0,0,0.414432328326074,0.5121554312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| |||
|short_description=p@chr19:8576745..8576781,- | |||
}} |
Revision as of 21:07, 20 January 2014
Short description: | p@chr19:8576745..8576781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:8576745..8576781, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.48e-15 | 13 |
germ line cell | 8.91e-14 | 7 |
germ cell | 8.91e-14 | 7 |
epithelial cell of tracheobronchial tree | 1.86e-10 | 9 |
epithelial cell of lower respiratory tract | 1.86e-10 | 9 |
pneumocyte | 6.66e-09 | 3 |
epithelial cell of lung | 1.83e-07 | 19 |
lung fibroblast | 1.86e-07 | 1 |
epithelial cell of esophagus | 5.45e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 9.25e-10 | 34 |
thoracic cavity | 9.25e-10 | 34 |
thoracic segment organ | 1.90e-09 | 35 |
lung | 4.72e-09 | 22 |
respiratory tube | 4.72e-09 | 22 |
respiration organ | 4.72e-09 | 22 |
pair of lungs | 4.72e-09 | 22 |
lung primordium | 4.72e-09 | 22 |
lung bud | 4.72e-09 | 22 |
pulmonary alveolus epithelium | 6.66e-09 | 3 |
alveolus | 6.66e-09 | 3 |
pulmonary lobule | 6.66e-09 | 3 |
lobule | 6.66e-09 | 3 |
alveolus of lung | 6.66e-09 | 3 |
alveolar system | 6.66e-09 | 3 |
pulmonary acinus | 6.66e-09 | 3 |
alveolar sac | 6.66e-09 | 3 |
alveolar wall | 6.66e-09 | 3 |
thoracic segment of trunk | 1.56e-07 | 52 |
respiratory tract epithelium | 1.83e-07 | 19 |
lung epithelium | 1.83e-07 | 19 |
testis | 2.08e-07 | 8 |
lower lobe of right lung | 2.10e-07 | 1 |
right lung lobe | 2.10e-07 | 1 |
lower lobe of lung | 2.10e-07 | 1 |
lobe of lung | 2.10e-07 | 1 |
right lung | 2.10e-07 | 1 |
respiratory tract | 2.88e-07 | 54 |
epithelial bud | 7.09e-07 | 37 |
epithelial fold | 8.63e-07 | 47 |