FFCP PHASE1:Hg19::chr19:5680503..5680541,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33702 | |||
|TSSclassifier=weak | |||
|UniProt=Q5XKP0 | |||
|association_with_transcript=369bp_to_ENST00000309324,NM_205767,uc002mch.1,uc002mci.1_5end | |||
|coexpression_cluster_id=C2480 | |||
|description=CAGE_peak_1_at_C19orf70_5end | |||
|id=chr19:5680503..5680541,- | |||
|ontology_enrichment_celltype=CL:0000183!1.24e-18!59;CL:0000680!1.92e-16!57;CL:0000056!1.92e-16!57;CL:0000355!1.92e-16!57;CL:0000187!3.10e-16!54;CL:0000055!2.24e-15!180;CL:0000222!2.88e-15!119;CL:0000192!5.28e-14!42;CL:0000514!5.28e-14!42;CL:0000393!1.08e-12!60;CL:0000211!1.08e-12!60;CL:0000359!3.63e-11!32;CL:0000220!1.48e-10!246;CL:0002371!3.76e-10!591;CL:0002321!5.81e-10!248;CL:0000144!2.22e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.73e-10;32!CL:0000192;3.66e-10;43!CL:0000187;1.56e-09;55!CL:0000393;7.87e-07;61!CL:0000211;7.87e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.02e-16,58;CL:0000056,1.02e-16,58;CL:0000355,1.02e-16,58;CL:0000187,1.65e-16,55;CL:0000222,7.10e-16,121;CL:0000192,2.86e-14,43;CL:0000514,2.86e-14,43;CL:0000393,5.86e-13,61;CL:0000211,5.86e-13,61;CL:0000359,3.63e-11,32;CL:0002321,2.12e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.66e-10;43!CL:0000355;3.72e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.74e-21!70;UBERON:0000486!4.70e-21!82;UBERON:0000914!6.26e-21!83;UBERON:0002329!6.26e-21!83;UBERON:0003077!6.26e-21!83;UBERON:0003059!6.26e-21!83;UBERON:0007282!6.26e-21!83;UBERON:0009618!6.26e-21!83;UBERON:0007285!6.26e-21!83;UBERON:0005256!1.03e-18!143;UBERON:0001134!1.37e-18!61;UBERON:0002036!1.37e-18!61;UBERON:0003082!1.37e-18!61;UBERON:0002385!1.18e-17!63;UBERON:0001015!1.18e-17!63;UBERON:0000383!1.18e-17!63;UBERON:0003104!7.44e-17!238;UBERON:0009142!7.44e-17!238;UBERON:0002100!7.37e-15!216;UBERON:0003914!3.18e-12!118;UBERON:0000490!4.10e-12!138;UBERON:0004872!5.36e-12!84;UBERON:0002049!4.88e-11!79;UBERON:0007798!4.88e-11!79;UBERON:0000481!1.03e-10!347;UBERON:0000055!1.39e-10!69;UBERON:0003103!1.52e-10!69;UBERON:0001981!2.74e-10!60;UBERON:0007500!2.74e-10!60;UBERON:0004537!2.74e-10!60;UBERON:0006965!2.74e-10!60;UBERON:0001637!1.42e-09!42;UBERON:0003509!1.42e-09!42;UBERON:0004572!1.42e-09!42;UBERON:0000483!3.53e-08!309;UBERON:0000119!3.88e-08!312;UBERON:0001009!1.65e-07!113;UBERON:0000475!5.01e-07!365;UBERON:0007100!5.28e-07!27;UBERON:0004573!5.32e-07!33;UBERON:0004571!5.32e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.86e-08;31!UBERON:0001015;8.86e-08;31!UBERON:0000383;8.86e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.08e-25,78;UBERON:0002329,9.06e-22,71;UBERON:0003059,9.06e-22,71;UBERON:0007282,9.06e-22,71;UBERON:0004290,9.06e-22,71;UBERON:0009618,9.06e-22,71;UBERON:0000486,2.43e-21,83;UBERON:0007524,2.65e-21,73;UBERON:0003077,2.81e-21,72;UBERON:0007285,2.81e-21,72;UBERON:0001134,7.23e-19,62;UBERON:0002036,7.23e-19,62;UBERON:0003082,7.23e-19,62;UBERON:0003104,2.54e-18,160;UBERON:0009142,2.54e-18,160;UBERON:0002385,6.21e-18,64;UBERON:0001015,6.21e-18,64;UBERON:0000383,6.21e-18,64;UBERON:0005256,7.16e-17,122;UBERON:0000490,1.01e-14,148;UBERON:0002100,1.74e-14,199;UBERON:0003914,5.51e-12,117;UBERON:0004872,8.73e-12,83;UBERON:0002049,7.89e-11,78;UBERON:0007798,7.89e-11,78;UBERON:0000055,2.26e-10,68;UBERON:0003103,2.69e-10,68;UBERON:0007500,4.45e-10,59;UBERON:0001981,4.45e-10,59;UBERON:0004537,4.45e-10,59;UBERON:0006965,4.45e-10,59;UBERON:0001637,1.42e-09,42;UBERON:0003509,1.42e-09,42;UBERON:0004572,1.42e-09,42;UBERON:0000483,1.05e-08,306;UBERON:0000119,1.16e-08,309;UBERON:0001009,2.44e-07,112;UBERON:0007100,5.28e-07,27;UBERON:0004573,5.32e-07,33;UBERON:0004571,5.32e-07,33 | |||
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| |||
|short_description=p1@C19orf70 | |||
}} |
Revision as of 20:46, 20 January 2014
Short description: | p1@C19orf70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C19orf70_5end |
Coexpression cluster: | C2480_Mesenchymal_liposarcoma_skeletal_Alveolar_heart_left_Osteoblast |
Association with transcript: | 369bp_to_ENST00000309324, NM_205767, uc002mch.1, uc002mci.1_5end |
EntrezGene: | C19orf70 |
HGNC: | 33702 |
UniProt: | Q5XKP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.02e-16 | 58 |
myoblast | 1.02e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-16 | 58 |
muscle cell | 1.65e-16 | 55 |
mesodermal cell | 7.10e-16 | 121 |
smooth muscle cell | 2.86e-14 | 43 |
smooth muscle myoblast | 2.86e-14 | 43 |
electrically responsive cell | 5.86e-13 | 61 |
electrically active cell | 5.86e-13 | 61 |
vascular associated smooth muscle cell | 3.63e-11 | 32 |
embryonic cell | 2.12e-10 | 250 |