FFCP PHASE1:Hg19::chr19:51876186..51876217,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4818 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7830 | |||
|TSSclassifier=weak | |||
|UniProt=Q16617 | |||
|association_with_transcript=-226bp_to_ENST00000221978,NM_005601,uc002pwj.2,uc002pwk.2_5end | |||
|description=CAGE_peak_3_at_NKG7_5end | |||
|id=chr19:51876186..51876217,- | |||
|ontology_enrichment_celltype=CL:0000037!2.10e-57!172;CL:0000566!2.10e-57!172;CL:0000988!8.76e-53!182;CL:0002032!5.47e-52!165;CL:0000837!5.47e-52!165;CL:0000738!4.68e-35!140;CL:0002087!8.81e-34!119;CL:0002031!2.12e-30!124;CL:0000763!1.42e-28!112;CL:0000049!1.42e-28!112;CL:0000838!8.17e-22!52;CL:0000542!3.24e-21!53;CL:0000051!3.24e-21!53;CL:0000084!1.08e-19!25;CL:0000827!1.08e-19!25;CL:0000134!2.04e-15!358;CL:0002320!1.18e-14!365;CL:0002194!3.74e-13!63;CL:0000576!3.74e-13!63;CL:0000040!3.74e-13!63;CL:0000559!3.74e-13!63;CL:0002009!1.67e-12!65;CL:0000219!1.73e-12!390;CL:0000557!6.92e-12!71;CL:0000625!1.73e-11!11;CL:0000766!2.20e-11!76;CL:0000839!4.78e-11!70;CL:0002057!5.17e-11!42;CL:0000791!7.49e-11!18;CL:0000789!7.49e-11!18;CL:0002420!7.49e-11!18;CL:0002419!7.49e-11!18;CL:0000790!7.49e-11!18;CL:0000034!2.25e-10!444;CL:0000860!6.74e-10!45;CL:0000048!9.48e-10!430;CL:0000723!2.68e-09!436;CL:0000784!7.95e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.50e-16;3!CL:0000084;3.16e-13;25!CL:0000625;5.17e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.80e-22,168;CL:0000988,2.25e-20,177;CL:0002032,1.64e-16,161;CL:0000837,1.64e-16,161;CL:0000784,4.62e-16,3;CL:0000084,2.84e-13,25;CL:0000827,2.84e-13,25;CL:0000625,6.19e-10,11;CL:0000763,6.52e-09,108;CL:0000049,6.52e-09,108;CL:0000838,1.77e-08,52;CL:0000542,2.79e-08,53;CL:0000051,2.79e-08,53;CL:0000738,5.12e-07,136;CL:0000134,9.35e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.09e-38!51;DOID:0060083!2.09e-38!51;DOID:1240!2.73e-34!39;DOID:8692!4.18e-26!31;DOID:0060058!1.65e-09!10;DOID:0050686!4.29e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.15e-29;31!DOID:1240;7.63e-29;39!DOID:2531;2.19e-21;51!DOID:0060083;2.19e-21;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.06e-36,51;DOID:0060083,2.06e-36,51;DOID:1240,1.15e-35,39;DOID:8692,1.35e-31,31;DOID:0050686,2.15e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.08e-15!375;UBERON:0002390!3.26e-14!102;UBERON:0003061!3.26e-14!102;UBERON:0002193!5.93e-12!112;UBERON:0002371!1.23e-10!80;UBERON:0001474!4.50e-10!86;UBERON:0002405!4.57e-09!115;UBERON:0004765!2.21e-07!101;UBERON:0001434!2.21e-07!101;UBERON:0004177!6.58e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.87e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57470412614962,0.393553906568396,0,0.383829398097213,0.619264493264304,0,0,0,1.39440961044543,0.568676929949686,2.93600439334847,0,0,0,0.895661896959697,0.647787332037959,0.515151135268373,0.290796477559129,0.377875943688809,0,0.697287110717054,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0.545812300115692,0.674170453335254,0.612167784741805,0.641858054152187,0,0,0.398927315243264,0,0.290209238628584,0,0,0.75374599577023,0,0,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,2.24203425192614,4.21414535640123,0.196709770113833,0,0.411202997999018,0,0,0,0,1.44833593950726,0,0,0.270803863765016,1.66518715643378,1.30059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.679856056185397,0,1.03088233644789,0,1.59282707162048,0,0.950452044448374,0.752875595388864,1.15187950038977,0,1.4206635122641,0.821127996921047,1.20964045934839,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6860405909618,12.5838880371628,15.2297575545122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0.394061520403854,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0.721346064882224,1.56512055366511,1.91311527274587,0.399158742865633,2.2980644415884,2.32840940996271,0.973865820823666,1.40398589056729,2.73881614839831,0.783399478865116,5.01268954180134,0.677167111206413,2.24823305145179,6.86119004449562,10.6461559422582,12.7096977559633,1.53620382154229,2.23676107892416,3.00328455081435,5.86164286206121,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,2.96646973608167,0,0,0,0,0,0.369254416383208,0,0,0,7.1620131831762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,1.8837630767403,0.166211681900156,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,2.55493176133945,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.339936274560377,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0,0,0.79994958341972,2.98736843143594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18944576355981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.45120521581504,0.399764623699716,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0.213233981900981,0,0.258355639344024,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p3@NKG7 | |||
}} |
Revision as of 00:48, 21 January 2014
Short description: | p3@NKG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NKG7_5end |
Coexpression cluster: | NA |
Association with transcript: | -226bp_to_ENST00000221978, NM_005601, uc002pwj.2, uc002pwk.2_5end |
EntrezGene: | NKG7 |
HGNC: | 7830 |
UniProt: | Q16617 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.80e-22 | 168 |
hematopoietic cell | 2.25e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.64e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-16 | 161 |
plasmacytoid dendritic cell | 4.62e-16 | 3 |
T cell | 2.84e-13 | 25 |
pro-T cell | 2.84e-13 | 25 |
CD8-positive, alpha-beta T cell | 6.19e-10 | 11 |
myeloid cell | 6.52e-09 | 108 |
common myeloid progenitor | 6.52e-09 | 108 |
lymphoid lineage restricted progenitor cell | 1.77e-08 | 52 |
lymphocyte | 2.79e-08 | 53 |
common lymphoid progenitor | 2.79e-08 | 53 |
leukocyte | 5.12e-07 | 136 |
mesenchymal cell | 9.35e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.87e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.06e-36 | 51 |
immune system cancer | 2.06e-36 | 51 |
leukemia | 1.15e-35 | 39 |
myeloid leukemia | 1.35e-31 | 31 |
organ system cancer | 2.15e-10 | 137 |