FFCP PHASE1:Hg19::chr19:46477121..46477125,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7887 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UNW9 | |||
|association_with_transcript=-464bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_3_at_NOVA2_5end | |||
|id=chr19:46477121..46477125,- | |||
|ontology_enrichment_celltype=CL:0002139!2.98e-12!24;CL:0000115!6.12e-11!35;CL:0000071!6.82e-08!18;CL:0002546!6.82e-08!18;CL:0002078!1.30e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002188;4.88e-10;5!CL:1000746;2.72e-07;7!CL:1000612;2.72e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.15e-10,5;CL:1000746,3.20e-07,7;CL:1000612,3.20e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.28e-11;2!UBERON:0006601;2.37e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.16e-56!57;UBERON:0005068!6.16e-56!57;UBERON:0006241!6.16e-56!57;UBERON:0007135!6.16e-56!57;UBERON:0007023!9.77e-53!115;UBERON:0002616!2.97e-48!59;UBERON:0001017!2.47e-47!82;UBERON:0005743!4.74e-46!86;UBERON:0002780!1.48e-44!41;UBERON:0001890!1.48e-44!41;UBERON:0006240!1.48e-44!41;UBERON:0000955!4.77e-44!69;UBERON:0006238!4.77e-44!69;UBERON:0003080!3.38e-43!42;UBERON:0000073!3.58e-43!94;UBERON:0001016!3.58e-43!94;UBERON:0003075!4.25e-43!86;UBERON:0007284!4.25e-43!86;UBERON:0002346!4.45e-42!90;UBERON:0002020!4.77e-41!34;UBERON:0003528!4.77e-41!34;UBERON:0001893!6.94e-41!34;UBERON:0002791!1.45e-39!33;UBERON:0001869!9.75e-39!32;UBERON:0000025!2.29e-32!194;UBERON:0004111!3.29e-31!241;UBERON:0002619!4.59e-31!22;UBERON:0003056!7.38e-31!61;UBERON:0000956!9.70e-29!25;UBERON:0000203!9.70e-29!25;UBERON:0001950!2.41e-28!20;UBERON:0000477!1.78e-27!286;UBERON:0000033!5.85e-24!123;UBERON:0000153!6.26e-23!129;UBERON:0007811!6.26e-23!129;UBERON:0004121!6.83e-22!169;UBERON:0000924!7.29e-22!173;UBERON:0006601!7.29e-22!173;UBERON:0000483!6.59e-18!309;UBERON:0000119!1.74e-17!312;UBERON:0002420!1.53e-14!9;UBERON:0007245!1.53e-14!9;UBERON:0010009!1.53e-14!9;UBERON:0010011!1.53e-14!9;UBERON:0000454!1.53e-14!9;UBERON:0002308!1.01e-13!9;UBERON:0000125!1.01e-13!9;UBERON:0003076!1.98e-13!15;UBERON:0003057!1.98e-13!15;UBERON:0009663!1.85e-11!7;UBERON:0004732!3.43e-11!13;UBERON:0000064!4.58e-11!219;UBERON:0000467!1.26e-10!625;UBERON:0000480!1.49e-10!626;UBERON:0001871!1.76e-10!7;UBERON:0000468!2.37e-10!659;UBERON:0000200!3.00e-10!6;UBERON:0004733!6.56e-10!12;UBERON:0002028!6.56e-10!12;UBERON:0007277!6.56e-10!12;UBERON:0000922!8.71e-10!612;UBERON:0000923!2.19e-09!604;UBERON:0005291!2.19e-09!604;UBERON:0006598!2.19e-09!604;UBERON:0002532!2.19e-09!604;UBERON:0002050!2.57e-09!605;UBERON:0005423!2.57e-09!605;UBERON:0000481!3.44e-09!347;UBERON:0002680!4.91e-09!9;UBERON:0001895!4.91e-09!9;UBERON:0010092!4.91e-09!9;UBERON:0002021!9.24e-09!5;UBERON:0000055!9.25e-09!69;UBERON:0000349!9.99e-09!5;UBERON:0001872!1.88e-08!5;UBERON:0004872!4.64e-08!84;UBERON:0001986!6.82e-08!18;UBERON:0004638!6.82e-08!18;UBERON:0004852!6.82e-08!18;UBERON:0000369!1.71e-07!4;UBERON:0002435!1.71e-07!4;UBERON:0000204!1.71e-07!4;UBERON:0010082!1.71e-07!4;UBERON:0002049!2.31e-07!79;UBERON:0007798!2.31e-07!79;UBERON:0001009!7.72e-07!113;UBERON:0000475!7.79e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;7.70e-60;32!UBERON:0001869;1.87e-58;32!UBERON:0002619;2.91e-55;22!UBERON:0001950;1.44e-53;20!UBERON:0001893;6.90e-52;34!UBERON:0003528;3.68e-51;34!UBERON:0002020;3.68e-51;34!UBERON:0000956;1.79e-48;25!UBERON:0000203;1.79e-48;25!UBERON:0002780;1.64e-43;41!UBERON:0001890;1.64e-43;41!UBERON:0000073;2.33e-29;53!UBERON:0002616;2.33e-29;53!UBERON:0002420;7.89e-28;9!UBERON:0007245;7.89e-28;9!UBERON:0010009;7.89e-28;9!UBERON:0010011;7.89e-28;9!UBERON:0000454;7.89e-28;9!UBERON:0001871;3.83e-27;6!UBERON:0001017;4.25e-20;75!UBERON:0000955;9.54e-20;68!UBERON:0009663;1.82e-18;7!UBERON:0002021;4.64e-17;5!UBERON:0005383;9.93e-17;3!UBERON:0005382;9.93e-17;3!UBERON:0001016;6.17e-16;83!UBERON:0000200;1.35e-14;6!UBERON:0000125;2.56e-14;9!UBERON:0002308;2.56e-14;9!UBERON:0000369;1.12e-12;4!UBERON:0002435;1.12e-12;4!UBERON:0000204;1.12e-12;4!UBERON:0002771;5.90e-12;2!UBERON:0001876;7.11e-12;2!UBERON:0001873;1.28e-11;2!UBERON:0002702;1.28e-11;2!UBERON:0001875;5.79e-11;2!UBERON:0006514;5.79e-11;2!UBERON:0000349;4.38e-10;5!UBERON:0011216;4.48e-08;132!UBERON:0001870;5.04e-08;3!UBERON:0007023;1.16e-07;114!UBERON:0000074;2.72e-07;7!UBERON:0001229;2.72e-07;7!UBERON:0001874;8.20e-07;1!UBERON:0010314;8.70e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,1.09e-65,32;UBERON:0001869,1.09e-65,32;UBERON:0003528,1.15e-61,34;UBERON:0002020,1.15e-61,34;UBERON:0001893,1.15e-61,34;UBERON:0002780,7.57e-61,41;UBERON:0001890,7.57e-61,41;UBERON:0003080,7.57e-61,41;UBERON:0006240,7.57e-61,41;UBERON:0002619,2.05e-55,22;UBERON:0001950,1.12e-53,20;UBERON:0001049,5.57e-52,56;UBERON:0005068,5.57e-52,56;UBERON:0006241,5.57e-52,56;UBERON:0007135,5.57e-52,56;UBERON:0000073,1.29e-50,53;UBERON:0002616,1.29e-50,53;UBERON:0000956,1.31e-48,25;UBERON:0000203,1.31e-48,25;UBERON:0003056,3.30e-47,61;UBERON:0001017,2.94e-43,81;UBERON:0001016,1.87e-41,89;UBERON:0000955,2.71e-41,68;UBERON:0006238,2.71e-41,68;UBERON:0003075,3.90e-40,82;UBERON:0007284,3.90e-40,82;UBERON:0002346,5.08e-38,86;UBERON:0010371,1.70e-30,104;UBERON:0002420,6.75e-28,9;UBERON:0007245,6.75e-28,9;UBERON:0010009,6.75e-28,9;UBERON:0010011,6.75e-28,9;UBERON:0000454,6.75e-28,9;UBERON:0001871,3.44e-27,6;UBERON:0010314,8.20e-25,132;UBERON:0007023,7.54e-23,114;UBERON:0004121,1.15e-20,171;UBERON:0000924,1.15e-20,171;UBERON:0006601,1.15e-20,171;UBERON:0000025,1.36e-19,192;UBERON:0009663,1.89e-18,7;UBERON:0002021,2.60e-17,5;UBERON:0011216,5.74e-17,223;UBERON:0005383,9.44e-17,3;UBERON:0005382,9.44e-17,3;UBERON:0004111,1.28e-15,240;UBERON:0000200,1.29e-14,6;UBERON:0000125,2.64e-14,9;UBERON:0002308,2.64e-14,9;UBERON:0000369,1.08e-12,4;UBERON:0002435,1.08e-12,4;UBERON:0000204,1.08e-12,4;UBERON:0010082,1.08e-12,4;UBERON:0001876,5.45e-12,2;UBERON:0002771,5.75e-12,2;UBERON:0000483,7.51e-12,306;UBERON:0000119,1.14e-11,309;UBERON:0002702,1.21e-11,2;UBERON:0001873,1.35e-11,2;UBERON:0010122,1.35e-11,2;UBERON:0001875,6.42e-11,2;UBERON:0006514,6.42e-11,2;UBERON:0000349,3.42e-10,5;UBERON:0001870,4.87e-08,3;UBERON:0010532,3.20e-07,7;UBERON:0000074,3.20e-07,7;UBERON:0001229,3.20e-07,7;UBERON:0001230,3.20e-07,7;UBERON:0003220,3.20e-07,7;UBERON:0005749,3.20e-07,7;UBERON:0004199,3.20e-07,7;UBERON:0004209,3.20e-07,7;UBERON:0004198,3.20e-07,7;UBERON:0001874,7.35e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,1.8809546988313,0,0.71153252537342,1.33888245105868,0.402829317109147,0,0.976248230192678,0.367663080345869,0,0.714397826272638,0.673588117878509,0.788280363383256,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.721832238805369,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,2.27466768141793,1.36074964221213,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,4.97073823883149,2.95405774462077,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.94813006139888,0,0,0,0,0,0,0,0,0,0,2.65722415744152,2.29133233388275,0,2.76448149828062,0.886642856860642,1.09692698576986,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.202203398942031,0,0.702793337176017,0,0,0,0,0,3.36680037793539,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,1.80126086612937,1.09524303113594,0,0,0,0,0.916641696046735,0.717873024576814,0.599037001496973,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0,1.24632101408756,0,0,1.03274246318642,0,0.0788057072991982,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,2.39460383124975,0,0,0.113312091520126,0,0,0.646414781807753,0.66116300871345,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,2.65820453990096,8.78589107294135,2.3786276834235,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,0,0,0.963438376446893,5.6678630530234,1.91560630868582,1.8460472781668,3.27693205088234,0.622415272177961,1.61475645631851,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.810451015420736,0.781078098613847,3.10030194751776,0.760989722326882,4.92277328116398,0,0,0,0,1.07140367175657,0,0,0.682986574053893,0.0887023701626388,0,0,0.475788130837822,0.789273282754189,0,0,0.078493092850514,3.92788974790005,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0.795803100645473,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,2.1593931382644,0.297046400327086,0.8453114551668,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0.458729283404541,0.716697915757256,0,1.29183831362738,6.10890966476528,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,0.724030971033267,0,0,0,0.0620747142958579,0,0.12729431655633,0.404234377916439,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@NOVA2 | |||
}} |
Revision as of 00:01, 21 January 2014
Short description: | p3@NOVA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NOVA2_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -464bp_to_ENST00000263257, NM_002516, uc002pdv.2_5end |
EntrezGene: | NOVA2 |
HGNC: | 7887 |
UniProt: | Q9UNW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.15e-10 | 5 |
glomerular cell | 3.20e-07 | 7 |
kidney corpuscule cell | 3.20e-07 | 7 |