FFCP PHASE1:Hg19::chr19:4472210..4472225,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z4V5,E9PGW4 | |||
|association_with_transcript=-29bp_to_ENST00000301284,ENST00000398364,NM_001001520,NM_032631,uc002mao.2,uc002map.2_5end | |||
|description=CAGE_peak_3_at_HDGFRP2_5end | |||
|id=chr19:4472210..4472225,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.65e-09!180;CL:0000393!9.36e-09!60;CL:0000211!9.36e-09!60;CL:0000183!2.72e-08!59;CL:0000187!4.59e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.50e-08,61;CL:0000211,4.50e-08,61;CL:0000192,6.39e-07,43;CL:0000514,6.39e-07,43;CL:0000187,8.33e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.74e-11!309;UBERON:0000119!3.32e-11!312;UBERON:0000475!1.69e-07!365;UBERON:0000025!2.66e-07!194;UBERON:0001637!3.14e-07!42;UBERON:0003509!3.14e-07!42;UBERON:0004572!3.14e-07!42;UBERON:0001981!5.36e-07!60;UBERON:0007500!5.36e-07!60;UBERON:0004537!5.36e-07!60;UBERON:0006965!5.36e-07!60;UBERON:0000486!9.60e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.14e-08,78;UBERON:0001637,6.78e-07,42;UBERON:0003509,6.78e-07,42;UBERON:0004572,6.78e-07,42;UBERON:0003914,7.88e-07,117;UBERON:0000483,8.57e-07,306;UBERON:0006555,8.76e-07,16;UBERON:0004819,8.76e-07,16 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,0,0,0.245733936501509,2.09340350391728,1.09220686065086,1.31883489114227,0.74259811776028,0.331397375727916,1.34465029290355,1.80808358407193,1.46062018077475,1.46379839637152,0.61560529038394,0.612002073732759,1.25381888591235,0.85870796139317,1.09499540058307,0.251085279189606,0.229240217243854,0.57470412614962,0.472264687882075,0,0,0.464448369948228,1.83884244895785,0.90361775633475,0.369754010166788,0.852139206383318,1.27952309238679,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0.411202997999018,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0,0,0,0,0.822189523018381,0.552700035571697,0.289803085735052,0.296573126324121,0.267540828089713,0,0.339928028092699,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0,0.821127996921047,0,0,0,2.43806866313962,0,1.2786256184353,0.722878304769133,0,0.289693037921647,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.43917392846563,3.27447688744282,2.5500670180478,0.741568885568859,0,0.696518949197069,0.26591592103773,0.715471872916026,0,0,0.596287222100115,0.860234595106124,0,1.13061588384802,0.838998872419812,0.275118041940067,1.04497483268405,0.258416759169329,0,0.66944122552934,0.805658634218294,0,1.22031028774085,0.367663080345869,0.81014194788176,0.357198913136319,0.673588117878509,1.0135033243499,0,0.949265659568129,0.183201743930407,0,0,0,0,0.633152558322899,1.19168262731897,1.14734648299525,0.354668382198357,1.12135520028461,0,0.24666754841716,0.622422070799533,0.538842688278752,0.653847612453835,0,0,0.937285727335186,0.624320153660641,0.570471821544449,0.298897361103602,1.05691048779388,0.323745888736263,0.140450806702248,0.204154171254893,0.859840221182376,0.723280468230358,0,0.494533858557114,0,1.43723628363248,0.168336113954066,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.600952235626387,0.907457465280168,0.89694817844431,1.2813443329114,0.211931901159562,0.300091096084402,0.103052529238439,1.54584324027377,0.558350568994769,0.843881661206331,0.487185025805993,0.504867548488229,0.368199594569197,0.161646056818812,1.06502877754984,0.806016785821122,0.67824236924195,0.386521706326594,0.818238361772504,0.860413786167011,1.21973706129595,1.19276791489337,1.39432731443422,1.34759371519982,0.504641701751257,0.36497735907583,0,1.28648187638577,1.38134921352481,0.928735856063958,0,0.473227200159376,0.505754070234305,0.241011029883482,0.441175890929576,0.217879444092406,0,0.404493924480493,0,0.38474715694639,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0,0,0,0.368965315629341,0.857839051492628,0.98775256867763,0,0.402115889646523,0.370353780634118,0.977424915930974,0,0,1.39116485970092,1.05667824812239,0.866198686566443,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0.234004265139238,0.445893486866185,0,0.671928512795438,0.425325291727159,0.447792613514241,0,1.15014803749563,0,0.704387472105808,0.414656231081544,0.288239906833923,0.37872730027914,0.126995788584338,0,0,1.71072446022705,0.308482478109971,0,0.571652865261156,0.224262168690721,0.43596006883328,0.51336800074665,0.517086863031111,0,0,1.06375246633948,0,1.02882949704857,1.41849132023278,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0.904318131178758,0,0.99972991182057,2.43247561282381,0.502257091432126,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.716243852959582,0,0.788123040807709,0,0.128343036279748,0.76228387266739,0,1.54657762555539,2.34522771468088,0.637938751653163,0,0,0,0.36807447515742,1.00034104211935,0.542530047399471,0.623912584592421,1.07057393278297,0.473107245101804,0.819989904948992,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.434418072340414,0.587403472388222,1.02943027143257,0,0.431428401637234,0.213455115606889,0.303127571446259,0,1.81434175997808,0.496215615637554,0.61384789315225,0.841980283299221,0.128139149255701,0,0.482561763430822,1.48418066444991,0.462629081407967,0.177561725313127,0.328508624055237,0,0.464841513839837,0.362578348774867,1.20303882181971,0.368323955743585,0.34444334449382,0.910455840033585,0.262248829918848,0.451199612907412,1.07821471946181,3.13739907670742,4.38417673959782,0.844413031143006,0,2.04112446331819,0.215915916102139,1.54227252690289,0.541892875087706,2.00675909541941,0.509752546090077,0.831076008928724,1.11937377361089,0,0.261435451024901,2.05160100093111,0.656029291399411,1.95227036798582,0.206082023295445,1.00726411300178,0.495056999523528,1.14853107599234,0,0,0.870036464629098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| |||
|short_description=p3@HDGFRP2 | |||
}} |
Revision as of 20:40, 20 January 2014
Short description: | p3@HDGFRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HDGFRP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000301284, ENST00000398364, NM_001001520, NM_032631, uc002mao.2, uc002map.2_5end |
EntrezGene: | HDGFRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.50e-08 | 61 |
electrically active cell | 4.50e-08 | 61 |
smooth muscle cell | 6.39e-07 | 43 |
smooth muscle myoblast | 6.39e-07 | 43 |
muscle cell | 8.33e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 7.14e-08 | 78 |
artery | 6.78e-07 | 42 |
arterial blood vessel | 6.78e-07 | 42 |
arterial system | 6.78e-07 | 42 |
epithelial tube | 7.88e-07 | 117 |
epithelium | 8.57e-07 | 306 |
excretory tube | 8.76e-07 | 16 |
kidney epithelium | 8.76e-07 | 16 |