FFCP PHASE1:Hg19::chr19:39904400..39904468,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29515 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H7P9 | |||
|association_with_transcript=0bp_to_ENST00000409797,uc002olj.2_5end | |||
|description=CAGE_peak_3_at_PLEKHG2_5end | |||
|id=chr19:39904400..39904468,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.85e-25!180;CL:0000057!3.60e-12!75;CL:0000183!6.51e-12!59;CL:0000393!1.22e-11!60;CL:0000211!1.22e-11!60;CL:0000680!4.52e-11!57;CL:0000056!4.52e-11!57;CL:0000355!4.52e-11!57;CL:0000187!1.26e-10!54;CL:0002620!1.86e-07!23;CL:0000192!2.22e-07!42;CL:0000514!2.22e-07!42;CL:0000222!7.52e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.43e-08;23!CL:0000393;1.45e-07;61!CL:0000211;1.45e-07;61!CL:0000187;2.49e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.61e-13,76;CL:0000393,8.59e-13,61;CL:0000211,8.59e-13,61;CL:0000680,3.45e-12,58;CL:0000056,3.45e-12,58;CL:0000355,3.45e-12,58;CL:0000187,1.02e-11,55;CL:0000192,3.05e-08,43;CL:0000514,3.05e-08,43;CL:0002620,5.89e-08,23;CL:0000222,8.84e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;3.65e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.33e-24!365;UBERON:0000468!4.97e-21!659;UBERON:0000119!1.56e-16!312;UBERON:0000481!2.29e-16!347;UBERON:0000483!9.33e-16!309;UBERON:0005256!5.44e-15!143;UBERON:0002100!6.64e-15!216;UBERON:0000467!1.02e-14!625;UBERON:0000480!2.02e-14!626;UBERON:0000914!3.05e-13!83;UBERON:0002329!3.05e-13!83;UBERON:0003077!3.05e-13!83;UBERON:0003059!3.05e-13!83;UBERON:0007282!3.05e-13!83;UBERON:0009618!3.05e-13!83;UBERON:0007285!3.05e-13!83;UBERON:0004872!8.97e-13!84;UBERON:0004290!2.14e-12!70;UBERON:0000477!2.90e-12!286;UBERON:0002385!4.01e-12!63;UBERON:0001015!4.01e-12!63;UBERON:0000383!4.01e-12!63;UBERON:0003914!5.23e-12!118;UBERON:0001134!5.43e-12!61;UBERON:0002036!5.43e-12!61;UBERON:0003082!5.43e-12!61;UBERON:0000922!1.58e-11!612;UBERON:0002049!1.61e-11!79;UBERON:0007798!1.61e-11!79;UBERON:0002050!5.61e-11!605;UBERON:0005423!5.61e-11!605;UBERON:0000923!1.12e-10!604;UBERON:0005291!1.12e-10!604;UBERON:0006598!1.12e-10!604;UBERON:0002532!1.12e-10!604;UBERON:0000025!1.91e-10!194;UBERON:0004111!3.06e-10!241;UBERON:0000486!8.80e-10!82;UBERON:0003104!2.31e-09!238;UBERON:0009142!2.31e-09!238;UBERON:0000490!3.09e-09!138;UBERON:0001009!6.83e-09!113;UBERON:0001981!1.29e-08!60;UBERON:0007500!1.29e-08!60;UBERON:0004537!1.29e-08!60;UBERON:0006965!1.29e-08!60;UBERON:0004535!1.63e-08!110;UBERON:0003103!2.54e-08!69;UBERON:0000055!2.17e-07!69;UBERON:0000479!2.56e-07!787;UBERON:0007100!4.84e-07!27;UBERON:0000062!4.90e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.30e-07;25!UBERON:0002385;6.49e-07;31!UBERON:0001015;6.49e-07;31!UBERON:0000383;6.49e-07;31!UBERON:0000948;9.90e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.35e-16,160;UBERON:0009142,2.35e-16,160;UBERON:0007503,6.76e-15,78;UBERON:0000119,1.88e-14,309;UBERON:0007524,6.07e-14,73;UBERON:0000483,1.05e-13,306;UBERON:0002329,1.39e-13,71;UBERON:0003059,1.39e-13,71;UBERON:0007282,1.39e-13,71;UBERON:0004290,1.39e-13,71;UBERON:0009618,1.39e-13,71;UBERON:0003077,2.18e-13,72;UBERON:0007285,2.18e-13,72;UBERON:0002385,2.63e-13,64;UBERON:0001015,2.63e-13,64;UBERON:0000383,2.63e-13,64;UBERON:0005256,3.18e-13,122;UBERON:0001134,3.60e-13,62;UBERON:0002036,3.60e-13,62;UBERON:0003082,3.60e-13,62;UBERON:0004872,1.44e-12,83;UBERON:0002100,1.26e-11,199;UBERON:0003914,2.94e-11,117;UBERON:0002049,3.51e-11,78;UBERON:0007798,3.51e-11,78;UBERON:0000486,5.40e-10,83;UBERON:0000490,1.66e-09,148;UBERON:0001009,3.37e-09,112;UBERON:0000479,4.62e-09,773;UBERON:0004535,8.43e-09,109;UBERON:0000025,9.06e-09,192;UBERON:0004111,1.52e-08,240;UBERON:0007500,1.67e-08,59;UBERON:0001981,1.67e-08,59;UBERON:0004537,1.67e-08,59;UBERON:0006965,1.67e-08,59;UBERON:0010314,1.78e-08,132;UBERON:0000922,2.16e-08,592;UBERON:0005423,6.16e-08,581;UBERON:0003103,9.97e-08,68;UBERON:0000923,2.05e-07,560;UBERON:0010316,2.05e-07,560;UBERON:0005291,2.05e-07,560;UBERON:0006598,2.05e-07,560;UBERON:0010317,2.05e-07,560;UBERON:0002532,2.05e-07,560;UBERON:0002050,3.59e-07,564;UBERON:0007100,3.93e-07,27;UBERON:0000055,4.76e-07,68;UBERON:0001637,8.65e-07,42;UBERON:0003509,8.65e-07,42;UBERON:0004572,8.65e-07,42;UBERON:0000948,8.90e-07,24;UBERON:0005498,8.90e-07,24;UBERON:0004140,8.90e-07,24;UBERON:0009881,8.90e-07,24;UBERON:0004141,8.90e-07,24;UBERON:0003084,8.90e-07,24;UBERON:0007005,8.90e-07,24;UBERON:0004139,8.90e-07,24;UBERON:0004291,8.90e-07,24 | |||
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| |||
|short_description=p3@PLEKHG2 | |||
}} |
Revision as of 23:15, 20 January 2014
Short description: | p3@PLEKHG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409797, uc002olj.2_5end |
EntrezGene: | PLEKHG2 |
HGNC: | 29515 |
UniProt: | Q9H7P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.61e-13 | 76 |
electrically responsive cell | 8.59e-13 | 61 |
electrically active cell | 8.59e-13 | 61 |
muscle precursor cell | 3.45e-12 | 58 |
myoblast | 3.45e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.45e-12 | 58 |
muscle cell | 1.02e-11 | 55 |
smooth muscle cell | 3.05e-08 | 43 |
smooth muscle myoblast | 3.05e-08 | 43 |
skin fibroblast | 5.89e-08 | 23 |
mesodermal cell | 8.84e-07 | 121 |