FFCP PHASE1:Hg19::chr19:39390172..39390210,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22933 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10886 | |||
|TSSclassifier=strong | |||
|UniProt=F8WDM4 | |||
|association_with_transcript=10bp_to_ENST00000423526_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_SIRT2_5end | |||
|id=chr19:39390172..39390210,- | |||
|ontology_enrichment_celltype=CL:0000766!1.01e-19!76;CL:0002057!5.13e-19!42;CL:0002009!4.99e-17!65;CL:0000557!1.31e-16!71;CL:0000839!3.58e-16!70;CL:0002194!5.89e-16!63;CL:0000576!5.89e-16!63;CL:0000040!5.89e-16!63;CL:0000559!5.89e-16!63;CL:0000738!1.46e-15!140;CL:0000860!3.25e-15!45;CL:0000763!2.38e-14!112;CL:0000049!2.38e-14!112;CL:0000988!7.41e-13!182;CL:0000037!3.71e-12!172;CL:0000566!3.71e-12!172;CL:0002031!3.90e-12!124;CL:0002087!2.94e-11!119;CL:0002032!3.16e-11!165;CL:0000837!3.16e-11!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-13;33!CL:0002057;2.12e-13;33!CL:0000473;7.32e-13;39!CL:0000234;7.32e-13;39!CL:0000576;2.37e-12;48!CL:0000766;3.43e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.19e-23,72;CL:0000473,1.13e-20,48;CL:0000234,1.13e-20,48;CL:0002009,1.48e-20,61;CL:0000557,7.07e-20,67;CL:0000839,2.06e-19,66;CL:0002194,2.09e-19,59;CL:0000576,2.09e-19,59;CL:0000040,2.09e-19,59;CL:0000559,2.09e-19,59;CL:0000860,5.08e-19,42;CL:0002057,5.08e-19,42;CL:0000738,1.33e-17,136;CL:0000763,1.44e-16,108;CL:0000049,1.44e-16,108;CL:0000988,3.85e-14,177;CL:0002031,5.25e-14,120;CL:0000037,1.02e-13,168;CL:0002087,4.39e-13,115;CL:0002032,9.58e-13,161;CL:0000837,9.58e-13,161 | |||
|ontology_enrichment_development_v019=CL:0002057;7.24e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.64e-17!112;UBERON:0001049!2.23e-16!57;UBERON:0005068!2.23e-16!57;UBERON:0006241!2.23e-16!57;UBERON:0007135!2.23e-16!57;UBERON:0002390!3.28e-16!102;UBERON:0003061!3.28e-16!102;UBERON:0007023!9.51e-16!115;UBERON:0002371!1.28e-14!80;UBERON:0002405!5.07e-14!115;UBERON:0001474!6.04e-13!86;UBERON:0002616!8.25e-13!59;UBERON:0001893!4.81e-12!34;UBERON:0002020!5.16e-12!34;UBERON:0003528!5.16e-12!34;UBERON:0002791!1.80e-11!33;UBERON:0004765!2.54e-11!101;UBERON:0001434!2.54e-11!101;UBERON:0003080!6.14e-11!42;UBERON:0001869!7.77e-11!32;UBERON:0002780!1.13e-10!41;UBERON:0001890!1.13e-10!41;UBERON:0006240!1.13e-10!41;UBERON:0003075!1.31e-10!86;UBERON:0007284!1.31e-10!86;UBERON:0000955!2.62e-10!69;UBERON:0006238!2.62e-10!69;UBERON:0001017!2.64e-10!82;UBERON:0002619!2.77e-10!22;UBERON:0005743!2.92e-10!86;UBERON:0001950!2.30e-09!20;UBERON:0003081!2.96e-09!216;UBERON:0002346!1.01e-08!90;UBERON:0000073!6.20e-08!94;UBERON:0001016!6.20e-08!94;UBERON:0000479!8.73e-08!787;UBERON:0000956!9.78e-08!25;UBERON:0000203!9.78e-08!25;UBERON:0003056!5.07e-07!61;UBERON:0003076!5.92e-07!15;UBERON:0003057!5.92e-07!15;UBERON:0002204!6.24e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.76e-10;34!UBERON:0002619;2.27e-10;22!UBERON:0003528;4.44e-10;34!UBERON:0002020;4.44e-10;34!UBERON:0001869;9.56e-10;32!UBERON:0002791;1.02e-09;32!UBERON:0001950;1.94e-09;20!UBERON:0000073;1.71e-08;53!UBERON:0002616;1.71e-08;53!UBERON:0002780;5.40e-08;41!UBERON:0001890;5.40e-08;41!UBERON:0000956;8.67e-08;25!UBERON:0000203;8.67e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.19e-19,108;UBERON:0002390,9.44e-19,98;UBERON:0003061,9.44e-19,98;UBERON:0002405,3.89e-18,93;UBERON:0002371,2.15e-17,76;UBERON:0001049,4.18e-16,56;UBERON:0005068,4.18e-16,56;UBERON:0006241,4.18e-16,56;UBERON:0007135,4.18e-16,56;UBERON:0001474,2.18e-15,82;UBERON:0007023,2.60e-15,114;UBERON:0000073,2.46e-14,53;UBERON:0002616,2.46e-14,53;UBERON:0004765,8.91e-14,90;UBERON:0001434,4.01e-12,100;UBERON:0001893,4.78e-12,34;UBERON:0003528,5.13e-12,34;UBERON:0002020,5.13e-12,34;UBERON:0003081,2.56e-11,203;UBERON:0003075,5.74e-11,82;UBERON:0007284,5.74e-11,82;UBERON:0002791,7.29e-11,32;UBERON:0001869,7.73e-11,32;UBERON:0002780,1.12e-10,41;UBERON:0001890,1.12e-10,41;UBERON:0003080,1.12e-10,41;UBERON:0006240,1.12e-10,41;UBERON:0010371,1.77e-10,104;UBERON:0002619,2.75e-10,22;UBERON:0001017,4.07e-10,81;UBERON:0000955,4.49e-10,68;UBERON:0006238,4.49e-10,68;UBERON:0000479,8.43e-10,773;UBERON:0001950,2.29e-09,20;UBERON:0002346,5.24e-09,86;UBERON:0000956,9.75e-08,25;UBERON:0000203,9.75e-08,25;UBERON:0001016,1.07e-07,89;UBERON:0003056,3.13e-07,61;UBERON:0010314,3.48e-07,132;UBERON:0002204,4.14e-07,167;UBERON:0003076,5.91e-07,15;UBERON:0003057,5.91e-07,15 | |||
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| |||
|short_description=p2@SIRT2 | |||
}} |
Revision as of 23:09, 20 January 2014
Short description: | p2@SIRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIRT2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 10bp_to_ENST00000423526_5end |
EntrezGene: | SIRT2 |
HGNC: | 10886 |
UniProt: | F8WDM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.19e-23 | 72 |
defensive cell | 1.13e-20 | 48 |
phagocyte | 1.13e-20 | 48 |
macrophage dendritic cell progenitor | 1.48e-20 | 61 |
granulocyte monocyte progenitor cell | 7.07e-20 | 67 |
myeloid lineage restricted progenitor cell | 2.06e-19 | 66 |
monopoietic cell | 2.09e-19 | 59 |
monocyte | 2.09e-19 | 59 |
monoblast | 2.09e-19 | 59 |
promonocyte | 2.09e-19 | 59 |
classical monocyte | 5.08e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.08e-19 | 42 |
leukocyte | 1.33e-17 | 136 |
myeloid cell | 1.44e-16 | 108 |
common myeloid progenitor | 1.44e-16 | 108 |
hematopoietic cell | 3.85e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 5.25e-14 | 120 |
hematopoietic stem cell | 1.02e-13 | 168 |
nongranular leukocyte | 4.39e-13 | 115 |
hematopoietic oligopotent progenitor cell | 9.58e-13 | 161 |
hematopoietic multipotent progenitor cell | 9.58e-13 | 161 |