FFCP PHASE1:Hg19::chr19:3573282..3573289,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5002 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010xhn.1_5end | |||
|description=CAGE_peak_5_at_HMG20B_5end | |||
|id=chr19:3573282..3573289,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;8.43e-15;5!CL:0000148;9.67e-14;10!CL:0000451;6.67e-12;10!CL:0000990;4.03e-11;8!CL:0002567;3.21e-10;3!CL:0000147;1.79e-09;14!CL:0000710;4.74e-08;20!CL:0000075;5.26e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.64e-15,5;CL:0000148,5.09e-14,10;CL:0000541,5.09e-14,10;CL:0000451,8.07e-12,10;CL:0000990,4.04e-11,8;CL:0002567,3.31e-10,3;CL:0000147,1.15e-09,14;CL:0000710,2.76e-08,20;CL:0000075,3.57e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.140954404095971,2.00146596706261,0,0,0,0.631719873426831,2.87304191019822,0,0,0,1.31883489114227,0.74259811776028,0.994192127183747,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.816002764977012,0.940364164434263,0.286235987131057,0,0.376627918784408,0.382067028739756,0.492603536699674,0.157421562627358,0.786728553697808,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0.0774672005803016,0.426507697462265,1.46800219667424,1.66198622559563,0.601633342410425,0.217010870715852,0,0,0.257575567634187,1.16318591023652,0.755751887377619,0.485168122375632,0.464858073811369,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.709446689665756,0.689491361473237,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0.612167784741805,0.320929027076094,2.55734850319616,0.329851300186716,0,0,0,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0,0.949387162322653,0,0.637812899895131,0,0.336985893439485,0.300353785683013,0.16072558669708,0,0,0,0,0,0,1.28019066769952,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,0.590129310341499,0,0,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.589211814949674,0,0,0.128091319725675,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,4.87613732627923,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.527008714158756,0.589405839739707,0.364295288292542,0.370784442784429,0.97364218096405,1.0447784237956,0.531831842075461,0.476981248610684,1.14398982156026,0.371457501329565,0.39752481473341,0,0,0.56530794192401,0.838998872419812,1.10047216776027,0.835979866147242,1.03366703667732,0,0,1.20848795132744,0.760272105718513,2.4406205754817,0,0,0.714397826272638,0.44905874525234,0.225222960966644,0,0,0.732806975721629,0,0,0,0,0.25326102332916,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.756787138224657,0,0.234321431833797,0,0.570471821544449,1.19558944441441,0.469737994575059,0,0.280901613404497,0,0.368502951935304,0.413303124703062,1.18800285728205,0.989067717114227,0,0.718618141816238,0.168336113954066,0.625592599359821,0.277064115484183,0.877955241761676,0.919463387397059,0.600952235626387,0.340296549480063,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.292311015483596,0,0.276149695926898,0.80823028409406,0,0,0.169560592310488,0,0.272746120590835,0,0.243947412259191,0.397589304964456,0.69716365721711,0.310983165046111,0.504641701751257,0,0,2.57296375277154,0,0,0.721879481669586,0.473227200159376,0.842923450390509,0.964044119533928,0.55146986366197,1.74303555273925,0.474541238222193,0,0.588664395376038,1.53898862778556,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0.548751427043128,0,0.100528972411631,0.370353780634118,0,0,0,0.463721619900307,0.117408694235822,0.866198686566443,0,0.761016608938393,0,0,0.492434012174795,0,0.148631162288728,0,0,0.425325291727159,0.447792613514241,0,1.53353071666084,0.985326475791887,0.264145302039678,0,0,0.37872730027914,1.96843472305724,6.49380323449072,8.20522130470329,3.4214489204541,2.05654985406647,1.50171528921959,2.5724378936752,0.336393253036082,0.43596006883328,0.22001485746285,0.517086863031111,3.57656445851882,0,0.26593811658487,0,1.02882949704857,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0.336255431980582,0,0.431255149719035,0.256686072559497,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.623912584592421,0.535286966391485,0.315404830067869,0.468565659970853,0.601892199455438,2.27407504055985,1.03473071292505,0.664225598535437,0.737476674166813,0.521301686808497,0.587403472388222,0,0.413536052245775,0.431428401637234,0.213455115606889,0.606255142892519,0,0,0,0.460385919864187,0.561320188866147,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.348631135379878,0.241718899183244,0.40101294060657,0,0,0,0.393373244878272,1.35359883872224,0.231046011313244,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0.254876273045038,0,0.447749509444357,0.219259876645935,0,0.769350375349168,0,0.650756789328606,0.206082023295445,0.824125183365091,0.742585499285292,0.574265537996172,0.650060246036521,0,0.386682873168488,0.154048617114644,0.460511024178389,0.137836572484531,0.537101224341368,0.145016693914229,0.426133137080504,0.267096106940212,0,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,0.143124886741991,0.372158369359667,0,0.190630193923825,0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| |||
|short_description=p5@HMG20B | |||
}} |
Revision as of 20:32, 20 January 2014
Short description: | p5@HMG20B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HMG20B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010xhn.1_5end |
EntrezGene: | HMG20B |
HGNC: | 5002 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.64e-15 | 5 |
melanocyte | 5.09e-14 | 10 |
melanoblast | 5.09e-14 | 10 |
dendritic cell | 8.07e-12 | 10 |
conventional dendritic cell | 4.04e-11 | 8 |
light melanocyte | 3.31e-10 | 3 |
pigment cell | 1.15e-09 | 14 |
neurecto-epithelial cell | 2.76e-08 | 20 |
columnar/cuboidal epithelial cell | 3.57e-07 | 27 |