FFCP PHASE1:Hg19::chr19:19626531..19626574,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51079 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17194 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P0J0 | |||
|association_with_transcript=0bp_to_uc002nms.2,uc010xqx.1,uc010xqy.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_NDUFA13_5end | |||
|id=chr19:19626531..19626574,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-14!254;CL:0000220!1.24e-13!246;CL:0002321!1.84e-13!248;CL:0000548!1.21e-11!679;CL:0000004!1.21e-11!679;CL:0000255!1.21e-11!679;CL:0000222!2.29e-11!119;CL:0000012!3.77e-11!682;CL:0000055!1.54e-08!180;CL:0000680!5.35e-07!57;CL:0000056!5.35e-07!57;CL:0000355!5.35e-07!57;CL:0002076!7.75e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.67e-11;32!CL:0002595;9.07e-09;5!CL:0000192;4.69e-08;43!CL:0002149;2.25e-07;6!CL:0002255;2.25e-07;6!CL:0000515;3.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.55e-12,32;CL:0000192,1.67e-10,43;CL:0000514,1.67e-10,43;CL:0000680,2.26e-10,58;CL:0000056,2.26e-10,58;CL:0000355,2.26e-10,58;CL:0002595,1.41e-08,5;CL:0000187,9.51e-08,55;CL:0002149,1.31e-07,6;CL:0002255,1.31e-07,6;CL:0000222,5.93e-07,121;CL:0000393,8.76e-07,61;CL:0000211,8.76e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.55e-11;10!CL:0000514;4.69e-08;43 | |||
|ontology_enrichment_disease=DOID:305!8.00e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.25e-07;6!DOID:0060084;3.73e-07;3!DOID:127;3.73e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.31e-07,6;DOID:0060084,2.56e-07,3;DOID:127,2.56e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003914!5.23e-10!118;UBERON:0000490!5.73e-10!138;UBERON:0002100!2.31e-09!216;UBERON:0001981!3.02e-09!60;UBERON:0007500!3.02e-09!60;UBERON:0004537!3.02e-09!60;UBERON:0006965!3.02e-09!60;UBERON:0000926!5.05e-09!448;UBERON:0004120!5.05e-09!448;UBERON:0006603!5.05e-09!448;UBERON:0000055!9.42e-09!69;UBERON:0002049!2.10e-08!79;UBERON:0007798!2.10e-08!79;UBERON:0001637!2.32e-08!42;UBERON:0003509!2.32e-08!42;UBERON:0004572!2.32e-08!42;UBERON:0004573!1.15e-07!33;UBERON:0004571!1.15e-07!33;UBERON:0004872!2.89e-07!84;UBERON:0000486!3.82e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;9.07e-09;5!UBERON:0001533;9.07e-09;5!UBERON:0004175;2.33e-07;21!UBERON:0003135;4.29e-07;11!UBERON:0007500;7.12e-07;56!UBERON:0001981;7.12e-07;56!UBERON:0004537;7.12e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.14e-11,83;UBERON:0001134,3.96e-11,62;UBERON:0002036,3.96e-11,62;UBERON:0003082,3.96e-11,62;UBERON:0002329,8.11e-11,71;UBERON:0003059,8.11e-11,71;UBERON:0007282,8.11e-11,71;UBERON:0004290,8.11e-11,71;UBERON:0009618,8.11e-11,71;UBERON:0002385,1.09e-10,64;UBERON:0001015,1.09e-10,64;UBERON:0000383,1.09e-10,64;UBERON:0003077,1.27e-10,72;UBERON:0007285,1.27e-10,72;UBERON:0007524,1.97e-10,73;UBERON:0007500,3.51e-10,59;UBERON:0001981,3.51e-10,59;UBERON:0004537,3.51e-10,59;UBERON:0006965,3.51e-10,59;UBERON:0007503,1.47e-09,78;UBERON:0001637,6.14e-09,42;UBERON:0003509,6.14e-09,42;UBERON:0004572,6.14e-09,42;UBERON:0005256,7.06e-09,122;UBERON:0003834,1.41e-08,5;UBERON:0001533,1.41e-08,5;UBERON:0000055,1.77e-08,68;UBERON:0000490,1.87e-08,148;UBERON:0003914,2.08e-08,117;UBERON:0003133,7.25e-08,48;UBERON:0004573,1.26e-07,33;UBERON:0004571,1.26e-07,33;UBERON:0004872,1.27e-07,83;UBERON:0000926,1.55e-07,315;UBERON:0004120,1.55e-07,315;UBERON:0006603,1.55e-07,315;UBERON:0002100,2.20e-07,199;UBERON:0005156,2.49e-07,59;UBERON:0000990,2.49e-07,59;UBERON:0003135,4.45e-07,11;UBERON:0002049,4.67e-07,78;UBERON:0007798,4.67e-07,78 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,1.0007329835313,0.446961094427288,0,0,1.26343974685366,0,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0,0,0.449446968890169,0,0,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,0.434539556882471,0,0,0,0,0.175669571386252,16.4378739749629,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0,0,0.825354125820202,0.835979866147242,0,0,0.33472061276467,1.20848795132744,0.760272105718513,0,0.735326160691737,0,0.0892997282840798,0.22452937262617,0.563057402416611,1.53316637465883,1.89853131913626,0.549605231791222,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0.98667019366864,0,0.134710672069688,0.490385709340376,0.151357427644931,0.576175924479999,0.234321431833797,0,1.1409436430889,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0.423863802319124,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.487185025805993,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0,0.339121184620975,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.441175890929576,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0.462985512576611,0.190254152234598,2.37061319387782,0.858486162094873,0,0.234004265139238,0,0,0.503946384596579,0.425325291727159,0.358234090811393,0,0,0,0.352193736052904,0.207328115540772,0.144119953416961,0,0.571481048629521,0,0,0,0.308482478109971,0.901029173531752,0,0.224262168690721,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0.718874566474748,0,0,3.4747513600219,1.2328579353023,0.895304816199478,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0,0.601892199455438,0,0,0,0.737476674166813,0,0.783204629850962,0.343143423810856,0,0,0,0,0,0.604780586659361,0.496215615637554,0,0,0.256278298511402,0.511707249066704,0.64341568457443,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.697262270759755,0.604297247958111,1.20303882181971,0.368323955743585,0.229628896329213,0.182091168006717,0,0.902399225814824,0.385076685522074,0,1.46139224653261,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0,0,0.831076008928724,0,0,0,0,0.984043937099117,0.650756789328606,0.206082023295445,0.0915694648183434,0.247528499761764,0,0,0,0.386682873168488,0.308097234229289,0,0.413509717453592,0.107420244868274,0.290033387828457,0.255679882248303,0.267096106940212,0.661139661443912,0.576570202095319,0.510450849978337,0.10115778085555,1.85938219718914,0.31481234683064,1.3940745403212,0.616067160352178,2.12922412126809,0.869932992075073,0.18532421910392,1.5743737541619,0.372158369359667,0,0,0.511795582622668,0,0.318203247925937,0,0,0,0,2.02182481573316,0,0.842516912477962,0.48763373908959,0.731140468893853,2.11300293513511,0.409499734223957,0,0,1.10273068709225,0,1.31535265576129,1.15755106853338,0,1.42037263873893,0,0.281695602532241,0.143411352204052,0.196498082026242,1.426684205925,0.709522128141196,0,0.329294892959902,0,0.349934720244983,0.48111056362756,0,1.08890984861323,0,1.29151611801369,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0.568272293612826,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0.269605053441981,0,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.0874599999961957,0.724999575434793,0.227586896570999,0.762760950878299,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0.325942115766024,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0.18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| |||
|short_description=p2@NDUFA13 | |||
}} |
Revision as of 22:21, 20 January 2014
Short description: | p2@NDUFA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDUFA13_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc002nms.2, uc010xqx.1, uc010xqy.1_5end |
EntrezGene: | NDUFA13 |
HGNC: | 17194 |
UniProt: | Q9P0J0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.55e-12 | 32 |
smooth muscle cell | 1.67e-10 | 43 |
smooth muscle myoblast | 1.67e-10 | 43 |
muscle precursor cell | 2.26e-10 | 58 |
myoblast | 2.26e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.26e-10 | 58 |
smooth muscle cell of the subclavian artery | 1.41e-08 | 5 |
muscle cell | 9.51e-08 | 55 |
epithelial cell of uterus | 1.31e-07 | 6 |
stromal cell of endometrium | 1.31e-07 | 6 |
mesodermal cell | 5.93e-07 | 121 |
electrically responsive cell | 8.76e-07 | 61 |
electrically active cell | 8.76e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.31e-07 | 6 |
cell type benign neoplasm | 2.56e-07 | 3 |
leiomyoma | 2.56e-07 | 3 |