FFCP PHASE1:Hg19::chr19:13261328..13261359,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9592 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28871 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BTL4 | |||
|association_with_transcript=46bp_to_ENST00000292433,NM_004907,uc002mwr.2_5end | |||
|description=CAGE_peak_2_at_IER2_5end | |||
|id=chr19:13261328..13261359,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.52e-12!45;CL:0002057!3.94e-11!42;CL:0000766!1.47e-09!76;CL:0000839!2.06e-09!70;CL:0002009!3.09e-09!65;CL:0000557!3.16e-09!71;CL:0002194!4.65e-09!63;CL:0000576!4.65e-09!63;CL:0000040!4.65e-09!63;CL:0000559!4.65e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-11;33!CL:0002057;2.50e-11;33!CL:0000473;3.66e-08;39!CL:0000234;3.66e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.14e-12,42;CL:0002057,2.14e-12,42;CL:0000473,7.54e-11,48;CL:0000234,7.54e-11,48;CL:0000766,1.22e-09,72;CL:0000839,1.85e-09,66;CL:0000557,3.55e-09,67;CL:0002194,3.98e-09,59;CL:0000576,3.98e-09,59;CL:0000040,3.98e-09,59;CL:0000559,3.98e-09,59;CL:0002009,1.52e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;7.91e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.10e-11!659;UBERON:0002193!1.89e-10!112;UBERON:0000467!2.18e-10!625;UBERON:0007023!3.01e-10!115;UBERON:0000480!3.76e-10!626;UBERON:0003081!3.93e-10!216;UBERON:0002390!1.18e-09!102;UBERON:0003061!1.18e-09!102;UBERON:0000922!6.65e-08!612;UBERON:0002371!7.83e-08!80;UBERON:0000923!1.47e-07!604;UBERON:0005291!1.47e-07!604;UBERON:0006598!1.47e-07!604;UBERON:0002532!1.47e-07!604;UBERON:0000062!1.66e-07!511;UBERON:0000926!2.11e-07!448;UBERON:0004120!2.11e-07!448;UBERON:0006603!2.11e-07!448;UBERON:0002050!2.31e-07!605;UBERON:0005423!2.31e-07!605;UBERON:0002405!3.77e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.08e-10,108;UBERON:0003081,5.76e-10,203;UBERON:0002405,1.21e-09,93;UBERON:0002390,6.09e-09,98;UBERON:0003061,6.09e-09,98;UBERON:0002371,3.28e-08,76;UBERON:0007023,1.86e-07,114;UBERON:0001474,2.04e-07,82;UBERON:0000926,6.98e-07,315;UBERON:0004120,6.98e-07,315;UBERON:0006603,6.98e-07,315 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,1.34088328328186,0.872338524100369,2.53299878168311,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0.495065411840187,0.662794751455832,0.672325146451775,1.20538905604795,0.730310090387373,2.92759679274304,0,0.408001382488506,0,0.572471974262113,0.136874425072884,0,0.458480434487708,0.0821005894499457,0.157421562627358,0.786728553697808,0.383829398097213,0.928896739896456,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0.587200878669695,1.66198622559563,1.00272223735071,0.868043482863407,0.895661896959697,0,0.515151135268373,3.05336301437086,0.377875943688809,1.69808842831471,1.85943229524548,1.23350366406548,0.929119112685311,2.01384674625505,2.30544635876191,1.18241114944293,2.06847408441971,0,0,1.88242339542605,1.63743690034707,1.12361742222542,3.06083892370903,1.28371610830437,1.27867425159808,4.61791820261403,1.59570926097305,2.13112375266347,4.06292934080018,2.26954089876456,3.11411124497787,1.50749199154046,0,0.65156653411535,1.81619850790011,0.736555271975129,0.632924774881769,0.845021145247767,3.18906449947565,0.628975936525128,1.57260083605093,0.600707571366025,0.964353520182481,1.14005097496499,0.59675003159727,0.365328307529268,0,0,0,0,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.637130828648193,0,0,0.752875595388864,0.383959833463255,0,0.710331756132051,0.821127996921047,0.201606743224732,0.802320587350522,0.434473211648397,0,2.68280343881454,0.12786256184353,0,1.00267582127178,1.30361867064741,0,0,0,0.221729397462564,0.263504357079378,1.57174890597255,2.18577172975525,0.741568885568859,0.649094787309367,1.21890816109487,1.46253756570752,1.19245312152671,0.571994910780128,1.11437250398869,0,0.860234595106124,0.347140501607594,1.69592382577203,0,1.37559020970034,0.208994966536811,0.258416759169329,0,1.00416183829401,1.20848795132744,0,2.92874469057803,1.10298924103761,0.81014194788176,0.714397826272638,1.12264686313085,0.112611480483322,0,0.949265659568129,0.366403487860815,9.22462922052443,0,0.872188104285069,0,0.506522046658319,2.64818361626438,1.72101972449288,0,0.560677600142307,1.06748995729705,0.49333509683432,1.24484414159907,1.34710672069688,0.326923806226917,0.302714855289863,0,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0.117434498643765,0.323745888736263,0,0.61246251376468,0.122834317311768,0.413303124703062,1.18800285728205,0.494533858557114,0,1.43723628363248,0.336672227908132,0.250237039743928,0.277064115484183,0,1.22595118319608,0.600952235626387,0.453728732640084,1.97328599257748,0.427114777637135,0.423863802319124,1.20036438433761,0.412210116953756,2.57640540045629,0.558350568994769,0.675105328965065,0.68205903612839,2.01947019395292,1.01254888506529,0.969876340912871,2.4850671476163,0.302256294682921,0.508681776931463,0.193260853163297,0.545492241181669,0,1.46368447355514,0.265059536642971,0.813357600086629,0.518305275076852,0.756962552626885,0.36497735907583,0,2.57296375277154,2.76269842704961,1.85747171212792,0.721879481669586,0.828147600278907,0.505754070234305,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0,1.4763109092493,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.737930631258681,0,0.329250856225877,1.1240175325762,0.402115889646523,0.370353780634118,0.325808305310325,1.03993478527958,0,0,0.117408694235822,1.01056513432752,2.77791307545966,1.14152491340759,0.790204397959275,0,0.984868024349589,0.234004265139238,0.445893486866185,0,0,0,0.447792613514241,1.16253575405585,0.383382679165211,0,0.528290604079356,1.03664057770386,2.45003920808834,1.76739406796932,0.380987365753014,1.90994212779139,1.17217447210047,1.71072446022705,0.616964956219941,1.20137223137567,0.857479297891735,0.448524337381443,0,0.22001485746285,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,2.00902836572851,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0.335032530668698,0,0,2.99161459204025,0.414415513436035,0.24538298343828,0,0.813795071099207,1.03985430765404,0.178428988797162,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0,0.60818530127658,0.391602314925481,0.343143423810856,0.620304078368662,0.862856803274467,0.853820462427555,1.81876542867756,1.66435439510497,0.604780586659361,0.496215615637554,0.61384789315225,0.841980283299221,0.768834895534206,0.511707249066704,0.804269605718038,0,0.462629081407967,0.355123450626254,0.164254312027618,0.519254429183621,0.348631135379878,0.725156697549733,1.00253235151642,2.67034867914099,0.114814448164607,0.182091168006717,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| |||
|short_description=p2@IER2 | |||
}} |
Revision as of 21:39, 20 January 2014
Short description: | p2@IER2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IER2_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000292433, NM_004907, uc002mwr.2_5end |
EntrezGene: | IER2 |
HGNC: | 28871 |
UniProt: | Q9BTL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.14e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.14e-12 | 42 |
defensive cell | 7.54e-11 | 48 |
phagocyte | 7.54e-11 | 48 |
myeloid leukocyte | 1.22e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.85e-09 | 66 |
granulocyte monocyte progenitor cell | 3.55e-09 | 67 |
monopoietic cell | 3.98e-09 | 59 |
monocyte | 3.98e-09 | 59 |
monoblast | 3.98e-09 | 59 |
promonocyte | 3.98e-09 | 59 |
macrophage dendritic cell progenitor | 1.52e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.08e-10 | 108 |
lateral plate mesoderm | 5.76e-10 | 203 |
immune system | 1.21e-09 | 93 |
hematopoietic system | 6.09e-09 | 98 |
blood island | 6.09e-09 | 98 |
bone marrow | 3.28e-08 | 76 |
adult organism | 1.86e-07 | 114 |
bone element | 2.04e-07 | 82 |
mesoderm | 6.98e-07 | 315 |
mesoderm-derived structure | 6.98e-07 | 315 |
presumptive mesoderm | 6.98e-07 | 315 |