FFCP PHASE1:Hg19::chr19:13208081..13208102,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3754 | |||
|description=CAGE_peak_at_chr19:13208081..13208102,+ | |||
|id=chr19:13208081..13208102,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.46e-20!180;CL:0000057!1.16e-12!75 | |||
|ontology_enrichment_celltype_v019=CL:0000499;2.42e-09;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,2.19e-09,28;CL:0000057,8.56e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-16!365;UBERON:0001049!4.63e-13!57;UBERON:0005068!4.63e-13!57;UBERON:0006241!4.63e-13!57;UBERON:0007135!4.63e-13!57;UBERON:0000955!1.31e-12!69;UBERON:0006238!1.31e-12!69;UBERON:0000033!1.31e-12!123;UBERON:0005743!2.72e-12!86;UBERON:0001017!3.28e-12!82;UBERON:0000073!4.13e-12!94;UBERON:0001016!4.13e-12!94;UBERON:0001893!4.84e-12!34;UBERON:0002791!8.78e-12!33;UBERON:0002616!9.43e-12!59;UBERON:0002020!1.28e-11!34;UBERON:0003528!1.28e-11!34;UBERON:0000153!1.62e-11!129;UBERON:0007811!1.62e-11!129;UBERON:0001869!2.17e-11!32;UBERON:0002346!5.66e-11!90;UBERON:0003075!1.29e-10!86;UBERON:0007284!1.29e-10!86;UBERON:0000924!2.93e-10!173;UBERON:0006601!2.93e-10!173;UBERON:0000956!3.44e-10!25;UBERON:0000203!3.44e-10!25;UBERON:0004121!7.01e-10!169;UBERON:0000481!5.93e-09!347;UBERON:0002619!8.18e-09!22;UBERON:0007023!1.37e-08!115;UBERON:0002780!1.93e-08!41;UBERON:0001890!1.93e-08!41;UBERON:0006240!1.93e-08!41;UBERON:0001950!4.57e-08!20;UBERON:0003080!6.28e-08!42;UBERON:0000468!3.05e-07!659;UBERON:0004732!3.85e-07!13;UBERON:0002385!4.34e-07!63;UBERON:0001015!4.34e-07!63;UBERON:0000383!4.34e-07!63;UBERON:0001134!4.99e-07!61;UBERON:0002036!4.99e-07!61;UBERON:0003082!4.99e-07!61;UBERON:0003076!5.10e-07!15;UBERON:0003057!5.10e-07!15;UBERON:0000483!6.76e-07!309;UBERON:0000914!8.55e-07!83;UBERON:0002329!8.55e-07!83;UBERON:0003077!8.55e-07!83;UBERON:0003059!8.55e-07!83;UBERON:0007282!8.55e-07!83;UBERON:0009618!8.55e-07!83;UBERON:0007285!8.55e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;5.63e-10;25!UBERON:0000203;5.63e-10;25!UBERON:0004732;4.67e-09;13!UBERON:0002037;9.13e-09;6!UBERON:0002619;9.83e-09;22!UBERON:0001950;1.71e-08;20!UBERON:0004733;3.74e-08;12!UBERON:0002028;3.74e-08;12!UBERON:0001869;1.04e-07;32!UBERON:0001893;1.35e-07;34!UBERON:0002791;2.89e-07;32!UBERON:0003528;7.26e-07;34!UBERON:0002020;7.26e-07;34!UBERON:0000073;8.72e-07;53!UBERON:0002616;8.72e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.21e-11,53;UBERON:0002616,1.21e-11,53;UBERON:0000955,8.83e-11,68;UBERON:0006238,8.83e-11,68;UBERON:0000956,1.05e-10,25;UBERON:0000203,1.05e-10,25;UBERON:0001049,1.26e-10,56;UBERON:0005068,1.26e-10,56;UBERON:0006241,1.26e-10,56;UBERON:0007135,1.26e-10,56;UBERON:0002619,2.60e-09,22;UBERON:0001017,3.56e-09,81;UBERON:0001950,4.92e-09,20;UBERON:0001893,7.37e-09,34;UBERON:0002037,1.17e-08,6;UBERON:0006215,1.17e-08,6;UBERON:0004732,1.27e-08,13;UBERON:0002791,1.74e-08,32;UBERON:0001869,1.74e-08,32;UBERON:0001016,4.26e-08,89;UBERON:0003528,9.67e-08,34;UBERON:0002020,9.67e-08,34;UBERON:0004733,1.01e-07,12;UBERON:0002028,1.01e-07,12;UBERON:0007277,1.01e-07,12;UBERON:0003075,1.14e-07,82;UBERON:0007284,1.14e-07,82;UBERON:0002346,1.49e-07,86 | |||
|phase1_expression=0.726713517082227,4.71021152560163,0.845726424575827,0,1.78784437770915,1.74467704820074,2.53299878168311,0,0.783556884599516,0.245733936501509,0,0.218441372130172,0.263766978228454,1.73272894144065,0,0,1.80808358407193,0.730310090387373,1.46379839637152,3.0780264519197,3.06001036866379,3.13454721478088,2.57612388417951,1.77936752594749,0.753255837568817,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,3.00802746381534,1.59331170856906,0,2.91980922181582,0.378139268656271,0.443458794925128,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,1.98788780678127,1.51956613997496,0,1.14734648299525,1.06400514659507,0.560677600142307,2.1349799145941,0.24666754841716,0.622422070799533,0.269421344139376,0.326923806226917,0.454072282934794,0,0,0.312160076830321,0,0.597794722207204,0.117434498643765,0.161872944368132,0,0.408308342509787,0.368502951935304,0.929932030581889,2.37600571456411,0.494533858557114,0,0.718618141816238,1.0100166837244,0.375355559615893,0.831192346452549,0.877955241761676,1.22595118319608,0.150238058906597,0.453728732640084,1.61450672119976,1.92201649936711,2.11931901159562,0.600182192168805,1.75189299705346,1.03056216018252,1.48893485065272,1.68776332241266,1.94874010322397,1.00973509697646,1.65689817556139,5.4959659318396,0,0.906768884048762,0.508681776931463,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,1.39310378409594,1.44375896333917,0.118306800039844,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0.277765335475589,0,0,0,0.463721619900307,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0.253991577168676,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0.1466765716419,0.129271715757778,7.15312891703765,1.690605505112,0.26593811658487,0,2.05765899409714,0,0.266422179016099,0.857867961948885,0,0.823240336780769,0.325736184293735,0.355391948742546,0,1.20575750823834,0.871533458600294,1.29964888536674,0,0,0,1.19812427745791,2.29723871668228,0,0.868687840005475,1.2328579353023,0.537182889719687,0,0,0,0,1.01637849688985,0,0.773288812777695,1.67516265334349,0,0,0,0,1.8403723757871,1.50051156317903,0.271265023699736,3.11956292296211,3.03329280955175,2.20783381047509,1.99140405487612,0.601892199455438,0,1.03473071292505,0.664225598535437,0.368738337083406,1.30325421702124,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.744323423456331,1.07423381301644,3.08726103876381,1.53766979106841,3.07024349440022,4.18220194973379,0,1.07946785661859,0.710246901252508,0.98552587216571,0.519254429183621,0.697262270759755,0,1.00253235151642,0.276242966807689,1.03333003348146,0.728364672026868,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0.773365746336976,0.462145851343933,0.307007349452259,0,0.644521469209642,0.725083469571143,0.426133137080504,1.24644849905432,0.165284915360978,0,0.127612712494584,0.10115778085555,5.57814659156743,0.62962469366128,0.6970372701606,0.308033580176089,0.532306030317022,1.73986598415015,1.8532421910392,0,0,0.632758849437452,0.38126038784765,1.79128453917934,1.28381696410176,0.95460974377781,0.78494864019923,0.359744915166629,0.823611089208164,0.235624804691373,1.01091240786658,0,0.421258456238981,0.48763373908959,0.731140468893853,0,1.63799893689583,1.41405431953713,2.26016233240486,0,0.66343897524122,1.31535265576129,2.89387767133344,1.31178950409327,0,0.30982349809975,0.281695602532241,0.286822704408103,0.0982490410131212,0,0.709522128141196,3.16661452946496,1.31717957183961,0.379473173765715,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.637705090915289,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0.556543525114529,0,0.844501632511974,1.39473591775749,0,0,0,0,0.933118762985422,0.269605053441981,0,0,0.887790650732402,0,0,2.90799823828566,2.13366625772258,1.99613798001194,0,0.437299999980979,0,0,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0.885741385813839,0.361789315876224,1.52581736317083,1.43753037910592,1.18219047581419,0.87754158861589,0,0.139423744278603,0.615602068030377,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.176915129006678,0.61103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| |||
|short_description=p@chr19:13208081..13208102,+ | |||
}} |
Revision as of 21:37, 20 January 2014
Short description: | p@chr19:13208081..13208102, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13208081..13208102, + |
Coexpression cluster: | C3754_tenocyte_medial_Olfactory_Smooth_penis_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 2.19e-09 | 28 |
fibroblast | 8.56e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.21e-11 | 53 |
regional part of brain | 1.21e-11 | 53 |
brain | 8.83e-11 | 68 |
future brain | 8.83e-11 | 68 |
cerebral cortex | 1.05e-10 | 25 |
pallium | 1.05e-10 | 25 |
neural tube | 1.26e-10 | 56 |
neural rod | 1.26e-10 | 56 |
future spinal cord | 1.26e-10 | 56 |
neural keel | 1.26e-10 | 56 |
regional part of cerebral cortex | 2.60e-09 | 22 |
central nervous system | 3.56e-09 | 81 |
neocortex | 4.92e-09 | 20 |
telencephalon | 7.37e-09 | 34 |
cerebellum | 1.17e-08 | 6 |
rhombic lip | 1.17e-08 | 6 |
segmental subdivision of nervous system | 1.27e-08 | 13 |
regional part of telencephalon | 1.74e-08 | 32 |
cerebral hemisphere | 1.74e-08 | 32 |
nervous system | 4.26e-08 | 89 |
brain grey matter | 9.67e-08 | 34 |
gray matter | 9.67e-08 | 34 |
segmental subdivision of hindbrain | 1.01e-07 | 12 |
hindbrain | 1.01e-07 | 12 |
presumptive hindbrain | 1.01e-07 | 12 |
neural plate | 1.14e-07 | 82 |
presumptive neural plate | 1.14e-07 | 82 |
neurectoderm | 1.49e-07 | 86 |