FFCP PHASE1:Hg19::chr19:13049939..13049976,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1455 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-280bp_to_AF087986_5end | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_11_at_CALR_5end | |||
|id=chr19:13049939..13049976,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.02e-17!180;CL:0000144!8.75e-17!625;CL:0000548!1.51e-16!679;CL:0000004!1.51e-16!679;CL:0000255!1.51e-16!679;CL:0000012!1.59e-16!682;CL:0002371!5.31e-16!591;CL:0000222!8.58e-15!119;CL:0000220!9.72e-14!246;CL:0002321!1.51e-13!248;CL:0000183!2.65e-13!59;CL:0000680!4.57e-13!57;CL:0000056!4.57e-13!57;CL:0000355!4.57e-13!57;CL:0000393!8.07e-13!60;CL:0000211!8.07e-13!60;CL:0000187!2.18e-12!54;CL:0000192!3.36e-12!42;CL:0000514!3.36e-12!42;CL:0000359!1.54e-10!32;CL:0000003!1.47e-07!722;CL:0000048!2.39e-07!430;CL:0000723!2.98e-07!436;CL:0000034!3.88e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.54e-10;32!CL:0000192;1.99e-08;43!CL:0000187;6.41e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.23e-15,121;CL:0002321,3.13e-14,250;CL:0000680,9.65e-13,58;CL:0000056,9.65e-13,58;CL:0000355,9.65e-13,58;CL:0000393,1.20e-12,61;CL:0000211,1.20e-12,61;CL:0000187,4.67e-12,55;CL:0000192,8.23e-12,43;CL:0000514,8.23e-12,43;CL:0000359,1.18e-10,32;CL:0000048,3.20e-07,427;CL:0000723,4.43e-07,433;CL:0000034,5.78e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.99e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.29e-15!143;UBERON:0002049!1.61e-13!79;UBERON:0007798!1.61e-13!79;UBERON:0004290!1.85e-13!70;UBERON:0000486!2.15e-13!82;UBERON:0001637!2.76e-13!42;UBERON:0003509!2.76e-13!42;UBERON:0004572!2.76e-13!42;UBERON:0000914!3.76e-13!83;UBERON:0002329!3.76e-13!83;UBERON:0003077!3.76e-13!83;UBERON:0003059!3.76e-13!83;UBERON:0007282!3.76e-13!83;UBERON:0009618!3.76e-13!83;UBERON:0007285!3.76e-13!83;UBERON:0003914!3.96e-13!118;UBERON:0000490!3.16e-12!138;UBERON:0004872!3.60e-12!84;UBERON:0001981!4.47e-12!60;UBERON:0007500!4.47e-12!60;UBERON:0004537!4.47e-12!60;UBERON:0006965!4.47e-12!60;UBERON:0001134!1.00e-11!61;UBERON:0002036!1.00e-11!61;UBERON:0003082!1.00e-11!61;UBERON:0000055!1.22e-11!69;UBERON:0002385!6.75e-11!63;UBERON:0001015!6.75e-11!63;UBERON:0000383!6.75e-11!63;UBERON:0001009!4.14e-10!113;UBERON:0004573!6.59e-10!33;UBERON:0004571!6.59e-10!33;UBERON:0004535!1.10e-09!110;UBERON:0002100!5.22e-09!216;UBERON:0000926!1.09e-07!448;UBERON:0004120!1.09e-07!448;UBERON:0006603!1.09e-07!448;UBERON:0003104!4.69e-07!238;UBERON:0009142!4.69e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.00e-10;42!UBERON:0003509;9.00e-10;42!UBERON:0004572;9.00e-10;42!UBERON:0004573;4.69e-09;33!UBERON:0004571;4.69e-09;33!UBERON:0007500;5.21e-07;56!UBERON:0001981;5.21e-07;56!UBERON:0004537;5.21e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.52e-14,78;UBERON:0005256,2.65e-14,122;UBERON:0000490,8.26e-14,148;UBERON:0001637,1.94e-13,42;UBERON:0003509,1.94e-13,42;UBERON:0004572,1.94e-13,42;UBERON:0002049,2.14e-13,78;UBERON:0007798,2.14e-13,78;UBERON:0003914,2.39e-13,117;UBERON:0002329,3.47e-13,71;UBERON:0003059,3.47e-13,71;UBERON:0007282,3.47e-13,71;UBERON:0004290,3.47e-13,71;UBERON:0009618,3.47e-13,71;UBERON:0000486,3.65e-13,83;UBERON:0007524,6.25e-13,73;UBERON:0003077,1.57e-12,72;UBERON:0007285,1.57e-12,72;UBERON:0003104,4.51e-12,160;UBERON:0009142,4.51e-12,160;UBERON:0007500,6.21e-12,59;UBERON:0001981,6.21e-12,59;UBERON:0004537,6.21e-12,59;UBERON:0006965,6.21e-12,59;UBERON:0004872,1.00e-11,83;UBERON:0000055,1.69e-11,68;UBERON:0001134,1.96e-11,62;UBERON:0002036,1.96e-11,62;UBERON:0003082,1.96e-11,62;UBERON:0002385,1.25e-10,64;UBERON:0001015,1.25e-10,64;UBERON:0000383,1.25e-10,64;UBERON:0001009,2.47e-10,112;UBERON:0004573,5.13e-10,33;UBERON:0004571,5.13e-10,33;UBERON:0004535,6.64e-10,109;UBERON:0002100,1.04e-08,199;UBERON:0000926,5.17e-08,315;UBERON:0004120,5.17e-08,315;UBERON:0006603,5.17e-08,315 | |||
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| |||
|short_description=p11@CALR | |||
}} |
Revision as of 21:33, 20 January 2014
Short description: | p11@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CALR_5end |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | -280bp_to_AF087986_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.23e-15 | 121 |
embryonic cell | 3.13e-14 | 250 |
muscle precursor cell | 9.65e-13 | 58 |
myoblast | 9.65e-13 | 58 |
multi-potent skeletal muscle stem cell | 9.65e-13 | 58 |
electrically responsive cell | 1.20e-12 | 61 |
electrically active cell | 1.20e-12 | 61 |
muscle cell | 4.67e-12 | 55 |
smooth muscle cell | 8.23e-12 | 43 |
smooth muscle myoblast | 8.23e-12 | 43 |
vascular associated smooth muscle cell | 1.18e-10 | 32 |
multi fate stem cell | 3.20e-07 | 427 |
somatic stem cell | 4.43e-07 | 433 |
stem cell | 5.78e-07 | 441 |