FFCP PHASE1:Hg19::chr19:12923934..12923946,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:12923934..12923946,+ | |||
|id=chr19:12923934..12923946,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.87e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.98e-20;6!CL:0000404;1.98e-20;6!CL:0000650;6.14e-08;2!CL:1000500;6.14e-08;2!CL:1000618;6.14e-08;2!CL:1001318;6.14e-08;2!CL:0002173;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.09e-20,6;CL:0000031,1.09e-20,6;CL:0000404,1.09e-20,6;CL:0000047,1.10e-15,8;CL:0000650,9.19e-08,2;CL:1000500,9.19e-08,2;CL:1000618,9.19e-08,2;CL:1001318,9.19e-08,2;CL:0002173,9.19e-08,2;CL:0000133,1.49e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.98e-20;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.14e-08;2!UBERON:0003567;6.14e-08;2!UBERON:0005058;6.14e-08;2!UBERON:0003838;6.14e-08;2!UBERON:0003586;6.14e-08;2!UBERON:0005169;6.14e-08;2!UBERON:0002321;6.14e-08;2!UBERON:0005215;6.14e-08;2!UBERON:0002303;6.14e-08;2!UBERON:0002319;6.14e-08;2!UBERON:0009113;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,9.19e-08,2;UBERON:0003838,9.19e-08,2;UBERON:0003586,9.19e-08,2;UBERON:0005169,9.19e-08,2;UBERON:0002321,9.19e-08,2;UBERON:0005215,9.19e-08,2;UBERON:0002303,9.19e-08,2;UBERON:0002319,9.19e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,1.94826728407911,0.222820913770347,0,0,0,0,0,0.328875809207352,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.929551542956147,0.829288440122964,1.26160425437814,0,0,0,1.38134921352481,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,1.17217447210047,0,0.411309970813294,0.300343057843917,0,0,0,0,0,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0.532685175939381,0.246381468041427,0,0.116210378459959,0.483437798366489,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0.296964680832639,0,0.994147647766298,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.448788222048861,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,1.05226393590145,0.311064574191741,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0.387025325156341,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,1.44677833618517,1.2378549293751,1.66176135211674,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0.303298235083296,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0.443565449968902,0,0,0,0,0,0,0.150257608997218,0,0.813741466409323,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0.39997479170986,0,0,0,0.368211900503681,0,0,0,0,0,0.109209638192014,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0.647428837187895,0.102662806856247,0,0,0.233939463462106,0.596852325484105,0,0,0.219881033490858,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0.126166424835079,0,1.0135880080915,1.22386595690378,0,0.459474497674225,0.250707539292375,0.985123076837112,0,0,0.103432995861895,0.213233981900981,0,1.42095601639213,0.124149428591716,0.224263725161227,0.0636471582781649,0,0.435433495793923,0,0,0.0717222053926763,0,0.162806537221949,0.640364075266293,0,0,0,0,0,0,0.603821380773079,0.32056849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| |||
|short_description=p@chr19:12923934..12923946,+ | |||
}} |
Revision as of 21:32, 20 January 2014
Short description: | p@chr19:12923934..12923946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12923934..12923946, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.09e-20 | 6 |
neuroblast | 1.09e-20 | 6 |
electrically signaling cell | 1.09e-20 | 6 |
neuronal stem cell | 1.10e-15 | 8 |
mesangial cell | 9.19e-08 | 2 |
kidney interstitial cell | 9.19e-08 | 2 |
juxtaglomerular complex cell | 9.19e-08 | 2 |
renal interstitial pericyte | 9.19e-08 | 2 |
extraglomerular mesangial cell | 9.19e-08 | 2 |
neurectodermal cell | 1.49e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 9.19e-08 | 2 |
abdominal segment connective tissue | 9.19e-08 | 2 |
trunk connective tissue | 9.19e-08 | 2 |
interstitial tissue | 9.19e-08 | 2 |
extraglomerular mesangium | 9.19e-08 | 2 |
kidney interstitium | 9.19e-08 | 2 |
juxtaglomerular apparatus | 9.19e-08 | 2 |
mesangium | 9.19e-08 | 2 |