FFCP PHASE1:Hg19::chr19:11308398..11308420,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29300 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NXX5 | |||
|association_with_transcript=46bp_to_uc002mqq.2_5end | |||
|description=CAGE_peak_3_at_KANK2_5end | |||
|id=chr19:11308398..11308420,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;4.60e-15;4!CL:0002537;2.17e-11;5!CL:0002575;9.49e-09;2!CL:0000650;5.10e-08;2!CL:1000500;5.10e-08;2!CL:1000618;5.10e-08;2!CL:1001318;5.10e-08;2!CL:0002173;5.10e-08;2!CL:0002549;6.85e-08;2!CL:0002602;6.85e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,3.16e-15,4;CL:0002537,1.40e-11,5;CL:0002575,9.55e-09,2;CL:0000650,3.49e-08,2;CL:1000500,3.49e-08,2;CL:1000618,3.49e-08,2;CL:1001318,3.49e-08,2;CL:0002173,3.49e-08,2;CL:0002602,9.88e-08,2;CL:0002549,1.02e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.58e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!9.26e-09!347;UBERON:0000475!2.10e-08!365;UBERON:0002100!1.16e-07!216;UBERON:0000062!2.22e-07!511;UBERON:0003104!2.48e-07!238;UBERON:0009142!2.48e-07!238;UBERON:0005256!3.72e-07!143;UBERON:0003101!3.77e-07!22;UBERON:0000079!3.77e-07!22;UBERON:0000468!4.56e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.20e-13;4!UBERON:0006947;1.83e-10;3!UBERON:0004054;1.83e-10;3!UBERON:0003135;2.23e-10;11!UBERON:0005631;2.10e-08;10!UBERON:0000158;2.10e-08;10!UBERON:0000305;3.86e-08;7!UBERON:0003567;5.10e-08;2!UBERON:0003838;5.10e-08;2!UBERON:0003586;5.10e-08;2!UBERON:0005169;5.10e-08;2!UBERON:0002321;5.10e-08;2!UBERON:0005215;5.10e-08;2!UBERON:0002303;5.10e-08;2!UBERON:0002319;5.10e-08;2!UBERON:0005629;6.85e-08;2!UBERON:0005358;6.85e-08;2!UBERON:0006444;6.85e-08;2!UBERON:0001995;6.85e-08;2!UBERON:0001886;6.85e-08;2!UBERON:0004715;6.85e-08;2!UBERON:0004086;6.85e-08;2!UBERON:0005282;6.85e-08;2!UBERON:0005281;6.85e-08;2!UBERON:0005284;7.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.65e-13,4;UBERON:0004871,8.06e-11,8;UBERON:0004876,1.17e-10,11;UBERON:0006947,1.87e-10,3;UBERON:0004054,1.87e-10,3;UBERON:0003135,2.56e-10,11;UBERON:0000305,2.84e-08,7;UBERON:0003567,3.49e-08,2;UBERON:0003838,3.49e-08,2;UBERON:0003586,3.49e-08,2;UBERON:0005169,3.49e-08,2;UBERON:0002321,3.49e-08,2;UBERON:0005215,3.49e-08,2;UBERON:0002303,3.49e-08,2;UBERON:0002319,3.49e-08,2;UBERON:0003104,7.25e-08,160;UBERON:0009142,7.25e-08,160;UBERON:0006444,9.88e-08,2;UBERON:0001995,9.88e-08,2;UBERON:0004715,9.88e-08,2;UBERON:0005629,1.02e-07,2;UBERON:0005358,1.02e-07,2;UBERON:0001886,1.02e-07,2;UBERON:0004086,1.02e-07,2;UBERON:0005282,1.02e-07,2;UBERON:0005281,1.02e-07,2;UBERON:0005256,3.73e-07,122;UBERON:0005284,9.81e-07,5 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,0,0,0,0,0.631719873426831,0.783556884599516,0,0.697801167972428,0,0.527533956456907,1.11389717664042,2.31978163009541,0.672325146451775,0,0,0,0.984968464614303,1.42800483870977,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0.795285947051099,0,0,0.221729397462564,0.43917392846563,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.506522046658319,0,0.286836620748814,0,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0.326923806226917,2.27036141467397,1.15235184896,0,0.624320153660641,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.516628905878827,0,0,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.644349290496095,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,0,2.4694440679884,2.94017422771084,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.469634776943287,0.866198686566443,0,0.761016608938393,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,3.58819469905154,0,0.8800594298514,0.258543431515556,0,0,1.32969058292435,3.12022310734098,0,0,0.266422179016099,0.285955987316295,0,0,0,0.710783897485092,0.791951872933429,0.301439377059586,0,0,0,0,0,0.958499421966331,0,0,0.723906533337896,3.08214483825575,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0.623912584592421,0.178428988797162,0.157702415033935,0.585707074963566,1.20378439891088,2.27407504055985,0,0,0,0.0868836144680828,6.85304051119592,5.49029478097369,0,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.393373244878272,0,0,1.56869953835371,0,0.105551628892876,0,0,0,0,1.62567862526312,3.51182841698397,0,0,0.895499018888713,0,0.261435451024901,0,0.656029291399411,0.325378394664303,0.206082023295445,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0,0.107420244868274,0.580066775656914,0.340906509664404,0.356128142586949,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0.429374660225974,2.232950216158,0.316379424718726,0.190630193923825,0.255897791311334,1.71175595213568,0,0,0.179872457583315,0.54907405947211,0.117812402345686,1.01091240786658,1.58510321173008,0,1.95053495635836,0,0,0.545999645631943,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0.709522128141196,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,1.90995587790152,0.593929361665277,2.76444631889309,0,0,0.556543525114529,0,0,0.796991953004279,0.276283915531148,0,0.20453736500431,0,0,0,0,0,1.67693789582787,0,1.11136990144637,0.969332746095218,0.185536196323703,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.508507300585533,0.945550727071745,0,0,0,0,0,0,0,0,0.87754158861589,0,0,3.00106008164809,0.113942055847001,0,0,0.325942115766024,0.638002319463839,1.19076871422421,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,1.97292201424695,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0.694238953340524,0,0.174118413160805,1.04836000945218,0,0,0.146178634172371,0.246346371159628,0.387956065953678,0.706049013532002,0.677942222341597,0.137041924646751,0,0.253243183823515,0,0,1.06726497369676,0.19980960958213,0,0,0,0,0.124252535565433,0,0.67952103036807,0.209205692624666,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0.458320848023367,1.43574604915363,0.599037001496973,0,0.669514372325618,0.403100834920358,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.295282444544246,0.254019996197353,0,0,0,0,0,0,0,0.0607495566580247,0,1.41850273138557,0.944182586429966,0,0,0.767660789277781,0,1.98627591109629,0.5085370753095,2.17199840701485,0,0.326587360109409,0,0,0,0.453248366080503,0.293104467356165,0,0.129282956361551,0,0.342173675768659,0,0.640724475406168,0.943225830597996,0.414239055347196,0,0,0.121792598380896,0.638341257770182,0,0.2506898940227,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0.124192805882767,0,0.37494122388632,0,0,0,0,0,0,0,0,0.189403005275089,1.25783950876288,0.889811221596536,0,0.302461847526478,0,0.147855149989634,0,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0.398095888698616,1.20008329398946,0.686791410365586,0,2.52369796457302,0,0.214441591374926,0.521988583930423,0,0.463044948647668,0,0.358177682162975,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0.256241518587947,1.38172136692479,0.303859956177382,0.138258436151731,0,0,0,0,0.737318726261158,0.422624246717254,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.371807292777007,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.392590874004102,0,0,0,0,0,0.397832444232549,3.61009576076435,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,2.48105589194647,0,0,0,0,1.82089681270989,0.227662191351298,0.443511850813194,0,0.171488009437418,0.135939465953663,0.197318320688547,0.118193840883968,0.667388411352415,1.0989032999072,0,0.280272163313789,0.913158720509496,0.647782773655864,0,0.714765441766563,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0.68732060563215,0.31020638566432,0.955538938977433,0.223710863595585,0,0,0,0.205325613712494,0,0,0.233939463462106,0.596852325484105,0,0.22589216407792,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.470317296361523,0.490296643507811,0.235676547101626,0.392616934229891,0.594092800654172,0.8453114551668,0.509781344063451,0.939839179798536,0.837952543656503,0.0999411559249289,0.178553938605658,0.352894871715692,0.0802413666891683,2.19100916473955,1.37618785021362,0.143339583151451,0,0,0.436350690340377,1.0580536810308,0,1.38652688589425,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,1.01084389488329,0,0.606229585745915,0.535928260312357,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.286888821570705,0,0.162806537221949,0.106727345877715,0,0,0,4.03396765803459,4.06896178315738,0,0.201273793591026,0 | |||
|short_description=p3@KANK2 | |||
}} |
Revision as of 21:22, 20 January 2014
Short description: | p3@KANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KANK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_uc002mqq.2_5end |
EntrezGene: | KANK2 |
HGNC: | 29300 |
UniProt: | Q9NXX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 3.16e-15 | 4 |
amnion mesenchymal stem cell | 1.40e-11 | 5 |
central nervous system pericyte | 9.55e-09 | 2 |
mesangial cell | 3.49e-08 | 2 |
kidney interstitial cell | 3.49e-08 | 2 |
juxtaglomerular complex cell | 3.49e-08 | 2 |
renal interstitial pericyte | 3.49e-08 | 2 |
extraglomerular mesangial cell | 3.49e-08 | 2 |
annulus pulposus cell | 9.88e-08 | 2 |
fibroblast of choroid plexus | 1.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.65e-13 | 4 |
somatic layer of lateral plate mesoderm | 8.06e-11 | 8 |
urogenital ridge | 1.17e-10 | 11 |
male genital duct | 1.87e-10 | 3 |
internal male genitalia | 1.87e-10 | 3 |
male reproductive organ | 2.56e-10 | 11 |
amnion | 2.84e-08 | 7 |
abdomen connective tissue | 3.49e-08 | 2 |
abdominal segment connective tissue | 3.49e-08 | 2 |
trunk connective tissue | 3.49e-08 | 2 |
interstitial tissue | 3.49e-08 | 2 |
extraglomerular mesangium | 3.49e-08 | 2 |
kidney interstitium | 3.49e-08 | 2 |
juxtaglomerular apparatus | 3.49e-08 | 2 |
mesangium | 3.49e-08 | 2 |
mesenchyme | 7.25e-08 | 160 |
entire embryonic mesenchyme | 7.25e-08 | 160 |
annulus fibrosus | 9.88e-08 | 2 |
fibrocartilage | 9.88e-08 | 2 |
annulus fibrosus disci intervertebralis | 9.88e-08 | 2 |
vascular plexus | 1.02e-07 | 2 |
ventricle of nervous system | 1.02e-07 | 2 |
choroid plexus | 1.02e-07 | 2 |
brain ventricle | 1.02e-07 | 2 |
ventricular system of brain | 1.02e-07 | 2 |
ventricular system of central nervous system | 1.02e-07 | 2 |
trunk mesenchyme | 3.73e-07 | 122 |
brain vasculature | 9.81e-07 | 5 |