FFCP PHASE1:Hg19::chr19:10713112..10713198,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17292 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWA5 | |||
|association_with_transcript=0bp_to_ENST00000407327,NM_001145056,uc002mpe.3_5end | |||
|description=CAGE_peak_1_at_SLC44A2_5end | |||
|id=chr19:10713112..10713198,+ | |||
|ontology_enrichment_celltype=CL:0000115!3.88e-09!35;CL:0002139!9.16e-09!24;CL:0000542!1.64e-08!53;CL:0000051!1.64e-08!53;CL:0000838!2.27e-08!52;CL:0000791!3.32e-08!18;CL:0000789!3.32e-08!18;CL:0002420!3.32e-08!18;CL:0002419!3.32e-08!18;CL:0000790!3.32e-08!18;CL:0000048!1.22e-07!430;CL:0000213!1.47e-07!57;CL:0000215!1.47e-07!57;CL:0000236!1.59e-07!14;CL:0000222!2.56e-07!119;CL:0002078!2.79e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.56e-09;24!CL:0000791;3.33e-08;18!CL:0000789;3.33e-08;18!CL:0002419;3.33e-08;18!CL:0000115;5.15e-08;36!CL:0000236;2.20e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.34e-09,36;CL:0002139,9.15e-09,24;CL:0000542,1.64e-08,53;CL:0000051,1.64e-08,53;CL:0000838,2.27e-08,52;CL:0000791,3.32e-08,18;CL:0000789,3.32e-08,18;CL:0002420,3.32e-08,18;CL:0002419,3.32e-08,18;CL:0000790,3.32e-08,18;CL:0000213,6.17e-08,58;CL:0000215,6.17e-08,58;CL:0000048,7.22e-08,427;CL:0002078,1.11e-07,45;CL:0000236,1.59e-07,14;CL:0000222,1.78e-07,121;CL:0000723,6.46e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000790;3.33e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!3.61e-16!113;UBERON:0004535!1.01e-15!110;UBERON:0002049!3.84e-12!79;UBERON:0007798!3.84e-12!79;UBERON:0000055!3.84e-12!69;UBERON:0004872!7.55e-12!84;UBERON:0001981!9.48e-10!60;UBERON:0007500!9.48e-10!60;UBERON:0004537!9.48e-10!60;UBERON:0006965!9.48e-10!60;UBERON:0003081!1.31e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;2.58e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,7.11e-16,112;UBERON:0004535,1.98e-15,109;UBERON:0002049,7.38e-12,78;UBERON:0007798,7.38e-12,78;UBERON:0000055,7.50e-12,68;UBERON:0003081,1.20e-11,203;UBERON:0004872,1.43e-11,83;UBERON:0007500,1.80e-09,59;UBERON:0001981,1.80e-09,59;UBERON:0004537,1.80e-09,59;UBERON:0006965,1.80e-09,59 | |||
|phase1_expression=129.900041178448,78.7889927918818,102.050988565483,170.124607200322,84.9226079411847,172.723027771873,25.3299878168311,18.9515962028049,39.1778442299758,28.7508705706765,73.2691226371049,99.1723829470982,94.6923451840148,40.4715974179353,55.3433617465619,30.9269567367817,19.2862248967673,32.8639540674318,29.7639007262209,49.7409074630223,66.3002246543822,73.3484048258725,44.6528139924448,22.8580289871717,35.9051949241136,21.1665133921825,15.0244078693401,12.751146572816,89.2936908447012,48.746333558346,68.8931748756538,1.83884244895785,6.92773613189975,4.80680213216824,68.6359397141472,53.3134621827831,12.0376180127287,39.3336740057633,48.3312118403041,54.9037502911105,9.1805344438369,24.9398122834614,14.4242317875144,34.1685861131977,26.8291920019055,42.20962664668,27.8914844286822,29.1929200495496,50.791844826797,28.4815468398929,30.2269633704339,21.7563651497498,27.2349087781929,38.0835963314457,37.9194162464157,32.1894400617854,27.8364273059003,24.9443067734044,28.159718098123,18.9348125974895,31.327519164153,20.7806319117631,21.9410023383795,30.2619572878213,19.4440189881151,19.2910976394988,21.1759564658495,33.4160724791469,34.4178726157333,34.3158374634084,27.2429776185016,14.362827803515,18.9877432464531,94.219857695126,119.058407980424,54.3015891866694,42.2355653110822,41.2986455314142,19.4477959903467,179.558028556987,206.077677578257,134.623481324535,149.596807792124,145.819009206989,137.873934348851,85.772774735868,125.724339929308,129.319298989759,141.46360277596,126.889149353203,124.08842726586,102.179270950543,118.886973946946,52.8685314316103,38.675090845726,27.9187129861582,96.584497125892,75.4580664478396,88.408644569789,123.21644710293,119.613471854528,121.202638268092,120.792571612905,114.084307850418,96.6307376517466,105.893201610971,101.009841184351,125.017128052259,126.417685828202,107.706827515408,94.788056100546,92.1573812637467,126.785011503562,134.573036529126,157.848640945515,93.1402796973994,81.2427446436073,97.2465670715843,81.7253605222994,102.896628826683,100.266851893888,66.5316431113862,109.468111569541,116.979762595138,121.182804755775,106.549763419808,100.998743621289,100.400158125917,64.7205273796088,97.7564726208893,39.0090986102339,34.2057438448854,59.3282286953981,28.9151321907653,36.5976674764199,30.417768981773,32.6067238290951,58.3961844363163,17.2998715410244,19.7339163741682,16.9521136387733,63.0664248521486,2.91436230634034,0.741568885568859,1.9472843619281,1.74129737299267,3.72282289452822,139.993996467236,161.874559750776,146.354255523849,47.9017401753759,69.6790022035961,53.8067777491771,59.357333902021,63.7639143039057,61.076205310695,85.8969312466292,118.096458940383,121.672061838855,112.131405276165,116.820501961653,110.999727434903,93.7198300984971,61.0320713374142,85.0649045275848,76.9763657808768,67.3588117878509,61.5984798243773,68.9924868596475,97.7743629355173,68.3342504860419,283.327897487536,286.957395469761,2.18047026071267,89.4549513051573,35.9630653127407,26.8790637050834,83.182620017156,42.9148742460012,54.3857272138038,52.3070079075554,58.2135414264497,46.6816553099649,44.9933644712758,33.0193044289187,79.3112920859441,31.1134999219199,17.339785955701,10.3012825354006,27.953119255678,15.5426627773873,14.0921398372518,16.3491673811813,15.1686871238428,34.9103632845867,24.4440291450418,40.090403096197,83.1602000097437,59.8385968854108,66.4417794214759,97.7320672870084,21.2103503582123,23.2720446961853,50.1486049026371,42.5808292254413,49.6510229194412,50.0292736158967,28.9252067058054,54.7138388851029,64.4943314232074,33.9091041855299,55.5168527756144,39.2630136398452,53.5892323294909,68.1187694173619,40.3375434056626,42.4825342502826,36.0980297169084,51.6399931383299,80.9846744662248,71.0019185033229,65.9926243391044,47.646526439247,6.57086900755209,10.0916064618609,6.02289650316908,15.8565817968474,15.3734531252923,18.823418744862,22.7017710483661,17.9147804121696,30.6580981623697,40.6768784057521,62.3943710047099,52.4912701139426,63.6184061403811,52.6972021618797,5.32380600179297,5.05754070234305,4.82022059766964,3.86028904563379,6.75426276686459,3.55905928666645,4.31460186112526,5.69042248863504,4.23221872641029,245.805766390008,89.7547352342053,113.182853116135,102.906097969879,1.26755034821831,1.96565443335525,25.9947558939818,42.3804575438065,3.68965315629341,30.367502422839,21.7305565109079,13.4882103909143,23.9258954339681,3.05541869023148,20.2001149292401,29.1181739878282,12.9898207822746,38.8366856666507,56.2387645389586,96.7255199999195,107.412638917774,102.546988054448,3.95102198979638,6.00940313466411,7.63272718870932,87.2835908969357,53.061324937076,1.87467667973554,16.798212819886,5.81277898693785,3.85101647622248,1.45316969256981,2.68367875415648,26.111151608485,100.023021039025,93.712308224429,119.187201475827,112.103280882625,9.46118624953319,49.2765068970178,45.7148044119183,29.0823158238599,11.6195066754756,9.61097785100536,17.4354123904653,47.6557108467783,43.596006883328,23.3215748910621,66.5749336152555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| |||
|short_description=p1@SLC44A2 | |||
}} |
Revision as of 21:18, 20 January 2014
Short description: | p1@SLC44A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC44A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407327, NM_001145056, uc002mpe.3_5end |
EntrezGene: | SLC44A2 |
HGNC: | 17292 |
UniProt: | Q8IWA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.34e-09 | 36 |
endothelial cell of vascular tree | 9.15e-09 | 24 |
lymphocyte | 1.64e-08 | 53 |
common lymphoid progenitor | 1.64e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.27e-08 | 52 |
mature alpha-beta T cell | 3.32e-08 | 18 |
alpha-beta T cell | 3.32e-08 | 18 |
immature T cell | 3.32e-08 | 18 |
mature T cell | 3.32e-08 | 18 |
immature alpha-beta T cell | 3.32e-08 | 18 |
lining cell | 6.17e-08 | 58 |
barrier cell | 6.17e-08 | 58 |
multi fate stem cell | 7.22e-08 | 427 |
meso-epithelial cell | 1.11e-07 | 45 |
B cell | 1.59e-07 | 14 |
mesodermal cell | 1.78e-07 | 121 |
somatic stem cell | 6.46e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 7.11e-16 | 112 |
cardiovascular system | 1.98e-15 | 109 |
vasculature | 7.38e-12 | 78 |
vascular system | 7.38e-12 | 78 |
vessel | 7.50e-12 | 68 |
lateral plate mesoderm | 1.20e-11 | 203 |
splanchnic layer of lateral plate mesoderm | 1.43e-11 | 83 |
epithelial tube open at both ends | 1.80e-09 | 59 |
blood vessel | 1.80e-09 | 59 |
blood vasculature | 1.80e-09 | 59 |
vascular cord | 1.80e-09 | 59 |