FFCP PHASE1:Hg19::chr18:60190516..60190557,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22916 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C0B9,Q9BRD4 | |||
|association_with_transcript=-100bp_to_ENST00000269499,NM_017742,uc002lio.2,uc002lip.3_5end | |||
|description=CAGE_peak_3_at_ZCCHC2_5end | |||
|id=chr18:60190516..60190557,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.19e-16!172;CL:0000566!8.19e-16!172;CL:0000738!5.87e-15!140;CL:0000542!8.88e-15!53;CL:0000051!8.88e-15!53;CL:0000838!3.00e-14!52;CL:0002032!4.06e-14!165;CL:0000837!4.06e-14!165;CL:0000988!1.57e-13!182;CL:0002087!2.54e-11!119;CL:0002031!9.63e-11!124;CL:0000791!1.00e-08!18;CL:0000789!1.00e-08!18;CL:0002420!1.00e-08!18;CL:0002419!1.00e-08!18;CL:0000790!1.00e-08!18;CL:0000084!1.14e-07!25;CL:0000827!1.14e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.55e-10;53!CL:0000791;1.77e-10;18!CL:0000789;1.77e-10;18!CL:0002419;1.77e-10;18!CL:0000084;4.30e-09;25!CL:0000236;1.66e-07;13!CL:0000945;3.41e-07;24!CL:0000625;4.69e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.18e-18,53;CL:0000051,5.18e-18,53;CL:0000838,2.45e-17,52;CL:0000037,1.83e-16,168;CL:0000738,4.67e-16,136;CL:0002032,2.01e-14,161;CL:0000837,2.01e-14,161;CL:0000988,2.49e-14,177;CL:0002087,6.71e-12,115;CL:0002031,6.80e-11,120;CL:0000791,8.66e-11,18;CL:0000789,8.66e-11,18;CL:0002420,8.66e-11,18;CL:0002419,8.66e-11,18;CL:0000790,8.66e-11,18;CL:0000084,2.85e-09,25;CL:0000827,2.85e-09,25;CL:0000236,3.73e-08,14;CL:0000945,1.38e-07,24;CL:0000826,1.38e-07,24;CL:0000625,3.83e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.55e-10;53!CL:0000790;1.77e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.84e-18!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.11e-22,114 | |||
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| |||
|short_description=p3@ZCCHC2 | |||
}} |
Revision as of 19:38, 20 January 2014
Short description: | p3@ZCCHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZCCHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000269499, NM_017742, uc002lio.2, uc002lip.3_5end |
EntrezGene: | ZCCHC2 |
HGNC: | 22916 |
UniProt: | Q9C0B9Q9BRD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.18e-18 | 53 |
common lymphoid progenitor | 5.18e-18 | 53 |
lymphoid lineage restricted progenitor cell | 2.45e-17 | 52 |
hematopoietic stem cell | 1.83e-16 | 168 |
leukocyte | 4.67e-16 | 136 |
hematopoietic oligopotent progenitor cell | 2.01e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-14 | 161 |
hematopoietic cell | 2.49e-14 | 177 |
nongranular leukocyte | 6.71e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 6.80e-11 | 120 |
mature alpha-beta T cell | 8.66e-11 | 18 |
alpha-beta T cell | 8.66e-11 | 18 |
immature T cell | 8.66e-11 | 18 |
mature T cell | 8.66e-11 | 18 |
immature alpha-beta T cell | 8.66e-11 | 18 |
T cell | 2.85e-09 | 25 |
pro-T cell | 2.85e-09 | 25 |
B cell | 3.73e-08 | 14 |
lymphocyte of B lineage | 1.38e-07 | 24 |
pro-B cell | 1.38e-07 | 24 |
CD8-positive, alpha-beta T cell | 3.83e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.11e-22 | 114 |