FFCP PHASE1:Hg19::chr18:51750928..51750942,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6917 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBB5 | |||
|association_with_transcript=215bp_to_ENST00000256429,ENST00000398398,NM_003927,NM_015832,uc002lfg.1,uc002lfh.1_5end | |||
|description=CAGE_peak_4_at_MBD2_5end | |||
|id=chr18:51750928..51750942,- | |||
|ontology_enrichment_celltype=CL:0000063!8.62e-13!578;CL:0002371!4.17e-11!591;CL:0000548!7.60e-11!679;CL:0000004!7.60e-11!679;CL:0000255!7.60e-11!679;CL:0000144!1.36e-10!625;CL:0000012!2.19e-10!682;CL:0000766!5.65e-09!76;CL:0000557!7.49e-08!71;CL:0002194!1.44e-07!63;CL:0000576!1.44e-07!63;CL:0000040!1.44e-07!63;CL:0000559!1.44e-07!63;CL:0000134!1.51e-07!358;CL:0002009!1.54e-07!65;CL:0000860!2.29e-07!45;CL:0002057!3.16e-07!42;CL:0002320!4.27e-07!365 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.44e-09,72;CL:0000473,3.35e-08,48;CL:0000234,3.35e-08,48;CL:0000557,2.08e-07,67;CL:0002194,2.78e-07,59;CL:0000576,2.78e-07,59;CL:0000040,2.78e-07,59;CL:0000559,2.78e-07,59;CL:0000860,2.79e-07,42;CL:0002057,2.79e-07,42;CL:0002009,3.53e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.62e-10!448;UBERON:0004120!1.62e-10!448;UBERON:0006603!1.62e-10!448;UBERON:0003081!1.22e-08!216;UBERON:0004765!1.85e-08!101;UBERON:0001434!1.85e-08!101;UBERON:0002371!2.40e-08!80;UBERON:0001474!1.78e-07!86;UBERON:0002384!1.87e-07!375;UBERON:0002390!2.00e-07!102;UBERON:0003061!2.00e-07!102;UBERON:0002204!6.13e-07!167;UBERON:0002193!8.42e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.83e-08,203;UBERON:0002371,1.10e-07,76;UBERON:0000926,2.71e-07,315;UBERON:0004120,2.71e-07,315;UBERON:0006603,2.71e-07,315;UBERON:0004765,3.96e-07,90;UBERON:0001434,4.14e-07,100;UBERON:0001474,7.77e-07,82;UBERON:0002405,9.85e-07,93 | |||
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| |||
|short_description=p4@MBD2 | |||
}} |
Revision as of 19:24, 20 January 2014
Short description: | p4@MBD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MBD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 215bp_to_ENST00000256429, ENST00000398398, NM_003927, NM_015832, uc002lfg.1, uc002lfh.1_5end |
EntrezGene: | MBD2 |
HGNC: | 6917 |
UniProt: | Q9UBB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.44e-09 | 72 |
defensive cell | 3.35e-08 | 48 |
phagocyte | 3.35e-08 | 48 |
granulocyte monocyte progenitor cell | 2.08e-07 | 67 |
monopoietic cell | 2.78e-07 | 59 |
monocyte | 2.78e-07 | 59 |
monoblast | 2.78e-07 | 59 |
promonocyte | 2.78e-07 | 59 |
classical monocyte | 2.79e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.79e-07 | 42 |
macrophage dendritic cell progenitor | 3.53e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.83e-08 | 203 |
bone marrow | 1.10e-07 | 76 |
mesoderm | 2.71e-07 | 315 |
mesoderm-derived structure | 2.71e-07 | 315 |
presumptive mesoderm | 2.71e-07 | 315 |
skeletal element | 3.96e-07 | 90 |
skeletal system | 4.14e-07 | 100 |
bone element | 7.77e-07 | 82 |
immune system | 9.85e-07 | 93 |