FFCP PHASE1:Hg19::chr18:4003453..4003457,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr18:4003453..4003457,+ | |||
|id=chr18:4003453..4003457,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.14e-26;4!UBERON:0007284;7.14e-26;4 | |||
|ontology_enrichment_disease=DOID:3151!2.02e-08!1;DOID:3149!2.02e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001950!8.32e-46!20;UBERON:0002619!1.23e-41!22;UBERON:0001869!1.74e-38!32;UBERON:0000956!1.39e-36!25;UBERON:0000203!1.39e-36!25;UBERON:0001893!3.89e-36!34;UBERON:0002791!3.67e-32!33;UBERON:0002020!3.57e-31!34;UBERON:0003528!3.57e-31!34;UBERON:0002780!1.13e-29!41;UBERON:0001890!1.13e-29!41;UBERON:0006240!1.13e-29!41;UBERON:0000200!4.50e-29!6;UBERON:0003080!6.40e-29!42;UBERON:0002771!3.28e-22!3;UBERON:0000955!6.16e-22!69;UBERON:0006238!6.16e-22!69;UBERON:0001049!9.49e-21!57;UBERON:0005068!9.49e-21!57;UBERON:0006241!9.49e-21!57;UBERON:0007135!9.49e-21!57;UBERON:0001017!1.37e-20!82;UBERON:0002616!5.73e-20!59;UBERON:0003075!9.92e-20!86;UBERON:0007284!9.92e-20!86;UBERON:0005743!1.68e-19!86;UBERON:0003056!3.08e-19!61;UBERON:0002346!1.02e-18!90;UBERON:0007023!3.59e-18!115;UBERON:0000073!2.21e-17!94;UBERON:0001016!2.21e-17!94;UBERON:0001871!2.20e-14!7;UBERON:0001872!2.46e-13!5;UBERON:0002021!2.67e-13!5;UBERON:0000033!9.99e-13!123;UBERON:0000153!5.43e-12!129;UBERON:0007811!5.43e-12!129;UBERON:0004121!6.73e-11!169;UBERON:0000924!1.44e-10!173;UBERON:0006601!1.44e-10!173;UBERON:0002134!1.05e-08!1;UBERON:0005208!1.05e-08!1;UBERON:0005946!1.05e-08!1;UBERON:0005965!1.05e-08!1;UBERON:0002078!1.05e-08!1;UBERON:0002581!2.89e-08!1;UBERON:0003112!3.33e-08!1;UBERON:0000032!3.33e-08!1;UBERON:0005253!3.33e-08!1;UBERON:0003128!3.33e-08!1;UBERON:0002241!3.33e-08!1;UBERON:0001703!3.33e-08!1;UBERON:0004761!3.33e-08!1;UBERON:0009617!3.33e-08!1;UBERON:0002902!4.11e-08!1;UBERON:0009899!4.11e-08!1;UBERON:0002022!4.72e-08!1;UBERON:0007190!6.24e-08!1;UBERON:0001882!7.16e-08!1;UBERON:0005403!7.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.55e-98;1!UBERON:0005208;2.55e-98;1!UBERON:0004145;2.55e-98;1!UBERON:0005946;2.55e-98;1!UBERON:0005965;2.55e-98;1!UBERON:0002078;2.55e-98;1!UBERON:0002081;4.52e-50;2!UBERON:0002133;4.52e-50;2!UBERON:0003978;5.96e-34;3!UBERON:0004151;5.96e-34;3!UBERON:0000946;5.96e-34;3!UBERON:0010313;3.02e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.55e-98,1;UBERON:0005208,2.55e-98,1;UBERON:0005946,2.55e-98,1;UBERON:0005965,2.55e-98,1;UBERON:0002078,2.55e-98,1;UBERON:0002081,4.52e-50,2;UBERON:0002133,4.52e-50,2;UBERON:0010227,4.52e-50,2;UBERON:0003978,5.96e-34,3;UBERON:0009751,5.96e-34,3;UBERON:0004151,5.96e-34,3;UBERON:0000946,5.96e-34,3;UBERON:0002523,5.96e-34,3;UBERON:0005983,5.96e-34,3;UBERON:0004145,5.96e-34,3;UBERON:0002165,5.96e-34,3;UBERON:0002062,5.96e-34,3;UBERON:0007280,5.96e-34,3;UBERON:0004797,1.91e-15,7;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,4.43363357068786,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.798169295285756,0.41023272848151,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:4003453..4003457,+ | |||
}} |
Revision as of 18:25, 20 January 2014
Short description: | p@chr18:4003453..4003457, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr18:4003453..4003457, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.55e-98 | 1 |
right atrium valve | 2.55e-98 | 1 |
outflow tract of atrium | 2.55e-98 | 1 |
outflow part of right atrium | 2.55e-98 | 1 |
right cardiac atrium | 2.55e-98 | 1 |
cardiac atrium | 4.52e-50 | 2 |
atrioventricular valve | 4.52e-50 | 2 |
future cardiac atrium | 4.52e-50 | 2 |
valve | 5.96e-34 | 3 |
cardiac mesenchyme | 5.96e-34 | 3 |
cardiac chamber | 5.96e-34 | 3 |
cardial valve | 5.96e-34 | 3 |
tunica intima | 5.96e-34 | 3 |
heart layer | 5.96e-34 | 3 |
outflow tract | 5.96e-34 | 3 |
endocardium | 5.96e-34 | 3 |
endocardial cushion | 5.96e-34 | 3 |
presumptive endocardium | 5.96e-34 | 3 |
blood vessel layer | 1.91e-15 | 7 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |