FFCP PHASE1:Hg19::chr17:8762968..8762979,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr17:8762968..8762979,+ | |||
|id=chr17:8762968..8762979,+ | |||
|ontology_enrichment_celltype=CL:0000839!3.40e-37!70;CL:0000557!1.50e-36!71;CL:0002057!9.34e-36!42;CL:0000766!1.41e-33!76;CL:0000860!6.53e-33!45;CL:0002194!1.85e-29!63;CL:0000576!1.85e-29!63;CL:0000040!1.85e-29!63;CL:0000559!1.85e-29!63;CL:0002009!2.50e-28!65;CL:0002031!4.10e-28!124;CL:0000738!3.84e-25!140;CL:0002087!1.35e-21!119;CL:0000763!1.93e-21!112;CL:0000049!1.93e-21!112;CL:0000988!1.14e-20!182;CL:0002032!9.86e-20!165;CL:0000837!9.86e-20!165;CL:0000037!1.67e-18!172;CL:0000566!1.67e-18!172;CL:0002274!2.77e-14!5;CL:0000457!2.77e-14!5;CL:0002191!2.77e-14!5;CL:0000097!2.77e-14!5;CL:0000831!2.77e-14!5;CL:0002028!2.77e-14!5;CL:0000134!6.69e-08!358;CL:0000163!8.83e-08!9;CL:0002320!1.55e-07!365;CL:0000219!8.56e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.99e-27;33!CL:0002057;3.99e-27;33!CL:0000473;1.80e-16;39!CL:0000234;1.80e-16;39!CL:0000576;2.55e-13;48!CL:0000097;7.26e-09;5!CL:0002087;8.67e-08;104!CL:0000766;1.65e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.08e-22,42;CL:0002057,2.08e-22,42;CL:0002031,2.79e-21,120;CL:0000988,8.29e-20,177;CL:0000839,1.15e-19,66;CL:0000473,1.95e-19,48;CL:0000234,1.95e-19,48;CL:0000557,2.37e-19,67;CL:0000738,1.66e-18,136;CL:0000766,6.65e-18,72;CL:0002087,5.12e-17,115;CL:0002194,2.85e-15,59;CL:0000576,2.85e-15,59;CL:0000040,2.85e-15,59;CL:0000559,2.85e-15,59;CL:0002032,2.91e-15,161;CL:0000837,2.91e-15,161;CL:0002009,9.83e-15,61;CL:0000037,1.59e-14,168;CL:0000763,2.18e-11,108;CL:0000049,2.18e-11,108;CL:0000097,6.19e-09,5;CL:0002028,6.19e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.16e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.27e-33!80;UBERON:0002390!3.26e-32!102;UBERON:0003061!3.26e-32!102;UBERON:0001474!1.18e-30!86;UBERON:0002193!1.90e-28!112;UBERON:0004765!8.88e-25!101;UBERON:0001434!8.88e-25!101;UBERON:0002405!3.29e-22!115;UBERON:0002204!2.07e-13!167;UBERON:0003081!4.07e-10!216;UBERON:0002384!4.83e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.16e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.74e-20,98;UBERON:0003061,1.74e-20,98;UBERON:0002193,2.13e-18,108;UBERON:0002371,7.02e-17,76;UBERON:0001474,1.58e-15,82;UBERON:0004765,5.28e-14,90;UBERON:0002405,1.69e-13,93;UBERON:0001434,1.95e-12,100;UBERON:0002331,1.08e-09,10;UBERON:0000358,1.08e-09,10;UBERON:0000307,1.08e-09,10;UBERON:0000091,1.08e-09,10;UBERON:0000087,1.08e-09,10;UBERON:0007010,1.08e-09,10;UBERON:0007806,1.08e-09,10;UBERON:0008780,1.08e-09,10;UBERON:0005728,1.08e-09,10;UBERON:0003081,9.82e-09,203;UBERON:0002204,9.89e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,2.38091709404843,3.06972047123349,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,5.46615545412086,4.86705342405291,3.07426898855161,0.689491361473237,0.645484683583826,0,0,0,0.449446968890169,0.306083892370903,0.962787081228281,1.27867425159808,0.659702600373432,0.797854630486527,0,0.290209238628584,1.70215567407342,0.622822248995575,5.7787193009051,3.12889751052121,7.8187984093842,1.21079900526674,2.20966581592539,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,3.4486426652716,0.088048434013226,1.86595303986695,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15362711958732,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,3.21266241260907,2.92381458615275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:8762968..8762979,+ | |||
}} |
Revision as of 13:50, 20 January 2014
Short description: | p@chr17:8762968..8762979, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8762968..8762979, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.08e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-22 | 42 |
hematopoietic lineage restricted progenitor cell | 2.79e-21 | 120 |
hematopoietic cell | 8.29e-20 | 177 |
myeloid lineage restricted progenitor cell | 1.15e-19 | 66 |
defensive cell | 1.95e-19 | 48 |
phagocyte | 1.95e-19 | 48 |
granulocyte monocyte progenitor cell | 2.37e-19 | 67 |
leukocyte | 1.66e-18 | 136 |
myeloid leukocyte | 6.65e-18 | 72 |
nongranular leukocyte | 5.12e-17 | 115 |
monopoietic cell | 2.85e-15 | 59 |
monocyte | 2.85e-15 | 59 |
monoblast | 2.85e-15 | 59 |
promonocyte | 2.85e-15 | 59 |
hematopoietic oligopotent progenitor cell | 2.91e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-15 | 161 |
macrophage dendritic cell progenitor | 9.83e-15 | 61 |
hematopoietic stem cell | 1.59e-14 | 168 |
myeloid cell | 2.18e-11 | 108 |
common myeloid progenitor | 2.18e-11 | 108 |
mast cell | 6.19e-09 | 5 |
basophil mast progenitor cell | 6.19e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.74e-20 | 98 |
blood island | 1.74e-20 | 98 |
hemolymphoid system | 2.13e-18 | 108 |
bone marrow | 7.02e-17 | 76 |
bone element | 1.58e-15 | 82 |
skeletal element | 5.28e-14 | 90 |
immune system | 1.69e-13 | 93 |
skeletal system | 1.95e-12 | 100 |
umbilical cord | 1.08e-09 | 10 |
blastocyst | 1.08e-09 | 10 |
blastula | 1.08e-09 | 10 |
bilaminar disc | 1.08e-09 | 10 |
inner cell mass | 1.08e-09 | 10 |
cleaving embryo | 1.08e-09 | 10 |
connecting stalk | 1.08e-09 | 10 |
inner cell mass derived epiblast | 1.08e-09 | 10 |
extraembryonic mesoderm | 1.08e-09 | 10 |
lateral plate mesoderm | 9.82e-09 | 203 |
musculoskeletal system | 9.89e-07 | 167 |