FFCP PHASE1:Hg19::chr17:80278757..80278762,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr17:80278757..80278762,- | |||
|id=chr17:80278757..80278762,- | |||
|ontology_enrichment_celltype=CL:0000860!5.07e-33!45;CL:0002057!5.97e-30!42;CL:0002009!2.17e-25!65;CL:0002194!8.65e-25!63;CL:0000576!8.65e-25!63;CL:0000040!8.65e-25!63;CL:0000559!8.65e-25!63;CL:0000557!2.90e-22!71;CL:0000766!2.12e-21!76;CL:0000839!3.46e-21!70;CL:0002087!1.02e-12!119;CL:0000763!1.06e-12!112;CL:0000049!1.06e-12!112;CL:0000738!2.40e-11!140;CL:0002031!2.48e-10!124;CL:0000037!1.16e-07!172;CL:0000566!1.16e-07!172;CL:0002032!7.51e-07!165;CL:0000837!7.51e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.01e-39;33!CL:0002057;4.01e-39;33!CL:0000576;6.80e-28;48!CL:0000473;6.87e-28;39!CL:0000234;6.87e-28;39!CL:0000766;1.22e-14;69!CL:0002393;1.97e-11;6!CL:0002397;1.97e-11;6!CL:0000763;4.16e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.15e-48,42;CL:0002057,9.15e-48,42;CL:0000473,2.08e-41,48;CL:0000234,2.08e-41,48;CL:0002194,1.67e-32,59;CL:0000576,1.67e-32,59;CL:0000040,1.67e-32,59;CL:0000559,1.67e-32,59;CL:0002009,2.36e-31,61;CL:0000839,8.86e-29,66;CL:0000557,2.61e-28,67;CL:0000766,3.73e-26,72;CL:0000763,1.83e-16,108;CL:0000049,1.83e-16,108;CL:0002087,2.81e-15,115;CL:0002031,1.63e-14,120;CL:0000738,1.92e-12,136;CL:0002032,4.99e-10,161;CL:0000837,4.99e-10,161;CL:0000037,1.76e-09,168;CL:0000988,7.72e-09,177;CL:0002393,8.10e-08,9;CL:0002397,8.10e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.27e-35;42!UBERON:0010115;1.42e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-27!102;UBERON:0003061!1.03e-27!102;UBERON:0002193!3.78e-25!112;UBERON:0002371!1.77e-18!80;UBERON:0001474!2.06e-16!86;UBERON:0004765!3.48e-15!101;UBERON:0001434!3.48e-15!101;UBERON:0002405!1.95e-13!115;UBERON:0000178!1.67e-12!15;UBERON:0000179!1.67e-12!15;UBERON:0000463!1.67e-12!15;UBERON:0002204!1.37e-10!167;UBERON:0003081!1.82e-09!216;UBERON:0000926!8.04e-09!448;UBERON:0004120!8.04e-09!448;UBERON:0006603!8.04e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.12e-23;15!UBERON:0000179;1.12e-23;15!UBERON:0000463;1.12e-23;15!UBERON:0002390;1.45e-10;32!UBERON:0002363;1.42e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.82e-39,98;UBERON:0003061,2.82e-39,98;UBERON:0002193,2.61e-35,108;UBERON:0002371,1.24e-24,76;UBERON:0000178,8.41e-24,15;UBERON:0000179,8.41e-24,15;UBERON:0000463,8.41e-24,15;UBERON:0001474,1.27e-22,82;UBERON:0004765,2.36e-20,90;UBERON:0002405,1.33e-19,93;UBERON:0001434,5.07e-18,100;UBERON:0003081,5.73e-17,203;UBERON:0000926,1.11e-11,315;UBERON:0004120,1.11e-11,315;UBERON:0006603,1.11e-11,315;UBERON:0002204,1.48e-09,167;UBERON:0002363,1.91e-08,1;UBERON:0007645,1.91e-08,1;UBERON:0007647,1.91e-08,1;UBERON:0010115,1.91e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.60435557976113,1.73608696572681,0.671746422719773,0,0.515151135268373,0.581592955118259,0.377875943688809,0.242584061187816,0.697287110717054,1.23350366406548,0.309706370895104,8.63077176966451,4.09857130446561,1.89185783910868,0,1.29096936716765,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,1.53041946185451,0.320929027076094,0,4.61791820261403,7.38015533200038,2.13112375266347,0.580418477257168,0,0,10.80369260604,6.25779502104242,1.08594422352558,2.42159801053347,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0,0,2.27407504055985,0,0,0,0.173767228936166,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,2.53723804616085,4.58782324285425,6.83576624608995,1.42939065274673,0.822724546172388,2.59389324477087,1.62009431171434,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.278847488557207,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:80278757..80278762,- | |||
}} |
Revision as of 18:09, 20 January 2014
Short description: | p@chr17:80278757..80278762, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:80278757..80278762, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.15e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.15e-48 | 42 |
defensive cell | 2.08e-41 | 48 |
phagocyte | 2.08e-41 | 48 |
monopoietic cell | 1.67e-32 | 59 |
monocyte | 1.67e-32 | 59 |
monoblast | 1.67e-32 | 59 |
promonocyte | 1.67e-32 | 59 |
macrophage dendritic cell progenitor | 2.36e-31 | 61 |
myeloid lineage restricted progenitor cell | 8.86e-29 | 66 |
granulocyte monocyte progenitor cell | 2.61e-28 | 67 |
myeloid leukocyte | 3.73e-26 | 72 |
myeloid cell | 1.83e-16 | 108 |
common myeloid progenitor | 1.83e-16 | 108 |
nongranular leukocyte | 2.81e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.63e-14 | 120 |
leukocyte | 1.92e-12 | 136 |
hematopoietic oligopotent progenitor cell | 4.99e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.99e-10 | 161 |
hematopoietic stem cell | 1.76e-09 | 168 |
hematopoietic cell | 7.72e-09 | 177 |
intermediate monocyte | 8.10e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.10e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.82e-39 | 98 |
blood island | 2.82e-39 | 98 |
hemolymphoid system | 2.61e-35 | 108 |
bone marrow | 1.24e-24 | 76 |
blood | 8.41e-24 | 15 |
haemolymphatic fluid | 8.41e-24 | 15 |
organism substance | 8.41e-24 | 15 |
bone element | 1.27e-22 | 82 |
skeletal element | 2.36e-20 | 90 |
immune system | 1.33e-19 | 93 |
skeletal system | 5.07e-18 | 100 |
lateral plate mesoderm | 5.73e-17 | 203 |
mesoderm | 1.11e-11 | 315 |
mesoderm-derived structure | 1.11e-11 | 315 |
presumptive mesoderm | 1.11e-11 | 315 |
musculoskeletal system | 1.48e-09 | 167 |
dura mater | 1.91e-08 | 1 |
future meninx | 1.91e-08 | 1 |
ectomeninx | 1.91e-08 | 1 |
future dura mater | 1.91e-08 | 1 |