FFCP PHASE1:Hg19::chr17:80274229..80274242,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2445 | |||
|description=CAGE_peak_at_chr17:80274229..80274242,- | |||
|id=chr17:80274229..80274242,- | |||
|ontology_enrichment_celltype=CL:0000084!2.35e-24!25;CL:0000827!2.35e-24!25;CL:0000791!3.80e-21!18;CL:0000789!3.80e-21!18;CL:0002420!3.80e-21!18;CL:0002419!3.80e-21!18;CL:0000790!3.80e-21!18;CL:0000625!5.56e-15!11;CL:0000738!9.38e-15!140;CL:0000037!6.36e-13!172;CL:0000566!6.36e-13!172;CL:0002087!1.25e-12!119;CL:0000838!6.02e-12!52;CL:0000542!1.38e-11!53;CL:0000051!1.38e-11!53;CL:0000988!2.16e-11!182;CL:0002032!5.19e-11!165;CL:0000837!5.19e-11!165;CL:0002031!1.43e-10!124;CL:0000624!9.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.18e-30;11!CL:0000791;4.81e-26;18!CL:0000789;4.81e-26;18!CL:0002419;4.81e-26;18!CL:0000084;9.69e-25;25!CL:0000623;1.31e-11;3!CL:0000542;3.78e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.02e-30,11;CL:0000791,4.31e-26,18;CL:0000789,4.31e-26,18;CL:0002420,4.31e-26,18;CL:0002419,4.31e-26,18;CL:0000790,4.31e-26,18;CL:0000084,7.98e-25,25;CL:0000827,7.98e-25,25;CL:0000838,9.74e-16,52;CL:0000542,2.32e-15,53;CL:0000051,2.32e-15,53;CL:0000623,1.01e-11,3;CL:0000825,1.01e-11,3;CL:0000037,2.56e-08,168;CL:0002087,3.26e-08,115;CL:0000738,7.38e-08,136;CL:0000988,1.37e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;4.81e-26;18!CL:0000051;3.78e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.89e-11!15;UBERON:0000179!2.89e-11!15;UBERON:0000463!2.89e-11!15;UBERON:0002390!5.50e-08!102;UBERON:0003061!5.50e-08!102;UBERON:0002193!8.86e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-13;15!UBERON:0000179;2.63e-13;15!UBERON:0000463;2.63e-13;15!UBERON:0002370;5.21e-08;2!UBERON:0005058;5.21e-08;2!UBERON:0009113;5.21e-08;2!UBERON:0002390;7.49e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.79e-13,15;UBERON:0000179,3.79e-13,15;UBERON:0000463,3.79e-13,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,0.77408061658038,0,0,0,0,0,0,2.21598163412751,0.200544447470142,1.08505435357926,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.398927315243264,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.983548850569165,3.53709686474248,3.08402248499264,3.67810289859492,0.977766799900771,0.946895611469467,5.84480185223734,2.89667187901451,0.294605907474837,1.77227115666897,1.35401931882508,2.43373507478783,0.910415432919148,2.63100647365882,4.14525026678773,6.0858648004361,4.74517002118593,1.33770414044857,7.31748666634838,2.49280553934646,0,0.68725489096526,2.02415753615602,4.14135038621326,3.25541726928209,0,3.61380285786655,4.47953139040464,6.24653632761729,4.02521328474829,1.64225599384209,1.61285394579786,2.67440195783507,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34097284313154,1.64648067356154,0,0,0,0.904318131178758,1.74306691720059,1.59956785891291,0,0,0,0,0,0,0,0,0,0.448340575974109,2.56139988262505,4.52817907204986,4.49200626979119,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,3.01999881146064,2.45473382947922,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,3.41788312304498,0.714695326373367,1.64544909234478,0.648473311192717,2.16012574895246,2.37937552888281,0,0,0,0,0,0.426851060090485,1.91311527274587,1.99579371432817,3.4470966623826,0,0,1.96558024679421,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.448788222048861,0,0,0,0.533034776018635,9.19739683761629,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.240476460754601,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44227865152393,2.30764403467266,3.03315947343832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.6879936280594,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0.437119121007915,0,0,0,0,0,0,0,0.845855261818682,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,5.16711278688049,1.86224142887574,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.336760265072938,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,3.01910690386539,0 | |||
|short_description=p@chr17:80274229..80274242,- | |||
}} |
Revision as of 18:09, 20 January 2014
Short description: | p@chr17:80274229..80274242, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80274229..80274242, - |
Coexpression cluster: | C2445_Mesenchymal_CD4_Natural_acute_thymus_CD8_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.02e-30 | 11 |
mature alpha-beta T cell | 4.31e-26 | 18 |
alpha-beta T cell | 4.31e-26 | 18 |
immature T cell | 4.31e-26 | 18 |
mature T cell | 4.31e-26 | 18 |
immature alpha-beta T cell | 4.31e-26 | 18 |
T cell | 7.98e-25 | 25 |
pro-T cell | 7.98e-25 | 25 |
lymphoid lineage restricted progenitor cell | 9.74e-16 | 52 |
lymphocyte | 2.32e-15 | 53 |
common lymphoid progenitor | 2.32e-15 | 53 |
natural killer cell | 1.01e-11 | 3 |
pro-NK cell | 1.01e-11 | 3 |
hematopoietic stem cell | 2.56e-08 | 168 |
nongranular leukocyte | 3.26e-08 | 115 |
leukocyte | 7.38e-08 | 136 |
hematopoietic cell | 1.37e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.79e-13 | 15 |
haemolymphatic fluid | 3.79e-13 | 15 |
organism substance | 3.79e-13 | 15 |