FFCP PHASE1:Hg19::chr17:79371008..79371022,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:79371008..79371022,- | |||
|id=chr17:79371008..79371022,- | |||
|ontology_enrichment_celltype=CL:0000066!6.23e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002188;4.12e-13;5!CL:0000182;1.33e-09;12!CL:1000746;1.64e-09;7!CL:1000612;1.64e-09;7!CL:0002032;3.56e-08;1!CL:0000557;3.56e-08;1!CL:0002591;3.56e-08;1!CL:0000319;3.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.73e-13,5;CL:0000182,8.77e-10,12;CL:1000746,1.53e-09,7;CL:1000612,1.53e-09,7;CL:0000319,3.57e-08,1;CL:0002591,4.72e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.83e-10;11!UBERON:0009497;7.14e-09;13!UBERON:0005425;1.09e-08;1!UBERON:0001041;5.92e-08;30 | |||
|ontology_enrichment_disease=DOID:14566!3.03e-18!239;DOID:162!3.19e-18!235;DOID:0050687!4.11e-16!143;DOID:305!4.97e-14!106 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.56e-08;1!DOID:0050619;3.56e-08;1!DOID:10165;3.56e-08;1!DOID:3030;3.56e-08;1!DOID:1357;3.56e-08;1!DOID:1798;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.02e-08,1;DOID:10165,2.02e-08,1;DOID:1798,2.02e-08,1;DOID:0050619,3.33e-08,1;DOID:1357,3.33e-08,1;DOID:3030,3.57e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.64e-09;7!UBERON:0001229;1.64e-09;7!UBERON:0000941;1.09e-08;1!UBERON:0001785;1.09e-08;1!UBERON:0002464;1.09e-08;1!UBERON:0004904;1.09e-08;1!UBERON:0001021;1.09e-08;1!UBERON:0001764;3.56e-08;1!UBERON:0001825;3.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.53e-09,7;UBERON:0000074,1.53e-09,7;UBERON:0001229,1.53e-09,7;UBERON:0001230,1.53e-09,7;UBERON:0003220,1.53e-09,7;UBERON:0005749,1.53e-09,7;UBERON:0004199,1.53e-09,7;UBERON:0004209,1.53e-09,7;UBERON:0004198,1.53e-09,7;UBERON:0000941,1.13e-08,1;UBERON:0001785,1.13e-08,1;UBERON:0002464,1.13e-08,1;UBERON:0004904,1.13e-08,1;UBERON:0001021,1.13e-08,1;UBERON:0003902,1.13e-08,1;UBERON:0005425,1.13e-08,1;UBERON:0005103,2.09e-08,8;UBERON:0000083,2.09e-08,8;UBERON:0009201,2.09e-08,8;UBERON:0006553,2.09e-08,8;UBERON:0003074,2.09e-08,8;UBERON:0003060,2.09e-08,8;UBERON:0001764,3.33e-08,1;UBERON:0001825,3.33e-08,1;UBERON:0000080,1.60e-07,9;UBERON:0002120,1.60e-07,9;UBERON:0004875,1.60e-07,9;UBERON:0005721,1.60e-07,9;UBERON:0005754,1.60e-07,9;UBERON:0007297,1.60e-07,9;UBERON:0005172,3.01e-07,54;UBERON:0005173,3.01e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0.694281003215189,0,0.419499436209906,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0.735326160691737,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0.508681776931463,0,0,0,0,0.265059536642971,0.116193942869518,1.34759371519982,0.504641701751257,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.22001485746285,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0.28853842595289,0.355709216742071,0,0,0,0.211673582723883,0,0,1.14117339516596,0.313359791546046,0,0,0.802940375518498,0.201799707191048,0,0,0.614481528616916,0,0.166849141711909,0.586164286206121,0,0,0,0.66614393599564,0,0.561421621224659,0,0.970884173996107,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0.371072392647405,0,1.04171104434093,0.524759999977174,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0.83654246567162,0.0769502585037971,0.113942055847001,0.46112780877612,0.179515288819544,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.494255755786011,0.417687798021821,0.134802265961354,0,0.234264445725339,0,0.586993856796269,0,0.394584402849391,0,0,0.126373159256976,0.60129367765797,1.34794648816421,0,0,0,0,0,0.416024019039416,0.173559738335131,0.0979923974143777,0,0,0.171986032471617,0.19351266257817,0.146178634172371,0.246346371159628,0,0.176512253383001,0.225980740780532,0,0.397429223405979,0.126621591911757,0.195551382734803,0,0,0,0.432271251462318,4.69600044280254,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0.410716136675979,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0,0,5.82479747637269,2.20592910460226,1.97798060114799,1.61768505250044,0.885847333632739,0,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,1.40963004463334,0.213574825135389,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0.110929051536852,0.310482014706917,0.138348634936231,0.124980407962107,1.36484205787483,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0.734210113519403,0.179088841081487,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,1.2288645437686,0.422624246717254,0,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0,0,0.637724760305049,0.495743057036009,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,4.28308260777463,0.294443155503077,0.235939446695481,0.366857197043358,0,0.381382095467167,0.690359926060101,0.198916222116275,0.0752103283492573,0,0,1.57144016688853,0.818859587550484,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0.394636641377094,0.118193840883968,0.111231401892069,0,0.314231179832004,0.840816489941367,0,0,0,0.357382720883282,0.316027223465453,0.23248285073625,0.173858272302579,0,0,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| |||
|short_description=p@chr17:79371008..79371022,- | |||
}} |
Revision as of 17:57, 20 January 2014
Short description: | p@chr17:79371008..79371022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79371008..79371022, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.73e-13 | 5 |
hepatocyte | 8.77e-10 | 12 |
glomerular cell | 1.53e-09 | 7 |
kidney corpuscule cell | 1.53e-09 | 7 |
mucus secreting cell | 3.57e-08 | 1 |
smooth muscle cell of the pulmonary artery | 4.72e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 1.53e-09 | 7 |
renal glomerulus | 1.53e-09 | 7 |
renal corpuscle | 1.53e-09 | 7 |
glomerular capsule | 1.53e-09 | 7 |
metanephric mesenchyme | 1.53e-09 | 7 |
glomerular tuft | 1.53e-09 | 7 |
S-shaped body | 1.53e-09 | 7 |
renal vesicle | 1.53e-09 | 7 |
comma-shaped body | 1.53e-09 | 7 |
cranial nerve II | 1.13e-08 | 1 |
cranial nerve | 1.13e-08 | 1 |
nerve trunk | 1.13e-08 | 1 |
nerve connecting eye with brain | 1.13e-08 | 1 |
nerve | 1.13e-08 | 1 |
retinal neural layer | 1.13e-08 | 1 |
presumptive neural retina | 1.13e-08 | 1 |
mesonephric epithelium | 2.09e-08 | 8 |
mesonephric tubule | 2.09e-08 | 8 |
nephric duct | 2.09e-08 | 8 |
renal duct | 2.09e-08 | 8 |
mesonephric duct | 2.09e-08 | 8 |
pronephric duct | 2.09e-08 | 8 |
maxillary sinus | 3.33e-08 | 1 |
paranasal sinus | 3.33e-08 | 1 |
mesonephros | 1.60e-07 | 9 |
pronephros | 1.60e-07 | 9 |
nephrogenic cord | 1.60e-07 | 9 |
pronephric mesoderm | 1.60e-07 | 9 |
rostral part of nephrogenic cord | 1.60e-07 | 9 |
presumptive pronephric mesoderm | 1.60e-07 | 9 |
abdomen element | 3.01e-07 | 54 |
abdominal segment element | 3.01e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.02e-08 | 1 |
endocrine pancreas cancer | 2.02e-08 | 1 |
pancreatic endocrine carcinoma | 2.02e-08 | 1 |
paranasal sinus cancer | 3.33e-08 | 1 |
maxillary sinus cancer | 3.33e-08 | 1 |
mucinous adenocarcinoma | 3.57e-08 | 1 |