FFCP PHASE1:Hg19::chr17:74965032..74965049,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr17:74965032..74965049,- | |||
|id=chr17:74965032..74965049,- | |||
|ontology_enrichment_celltype=CL:0000236!2.60e-17!14;CL:0000945!2.80e-17!24;CL:0000826!2.80e-17!24;CL:0002322!3.94e-16!5;CL:0000817!3.27e-10!3;CL:0000838!1.23e-07!52;CL:0000542!1.94e-07!53;CL:0000051!1.94e-07!53;CL:0000785!2.15e-07!2;CL:0000955!2.15e-07!2;CL:0000818!2.15e-07!2;CL:0000954!2.15e-07!2;CL:0000816!2.15e-07!2;CL:0000047!9.50e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.04e-23;24!CL:0000785;4.72e-17;1!CL:0000819;4.72e-17;1!CL:0000313;5.53e-17;1!CL:0000236;3.10e-11;13!CL:0000540;4.60e-11;6!CL:0000404;4.60e-11;6!CL:0000039;1.06e-09;7!CL:0000586;1.06e-09;7!CL:0000159;3.71e-09;2!CL:0000542;7.75e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.22e-23,24;CL:0000826,8.22e-23,24;CL:0000819,4.72e-17,1;CL:0000313,5.53e-17,1;CL:0000540,4.16e-11,6;CL:0000031,4.16e-11,6;CL:0000404,4.16e-11,6;CL:0000236,1.84e-10,14;CL:0000838,1.99e-10,52;CL:0000542,3.17e-10,53;CL:0000051,3.17e-10,53;CL:0000039,1.24e-09,7;CL:0000586,1.24e-09,7;CL:0000785,3.43e-09,2;CL:0000955,3.43e-09,2;CL:0000818,3.43e-09,2;CL:0000954,3.43e-09,2;CL:0000816,3.43e-09,2;CL:0000159,3.71e-09,2;CL:0000047,1.47e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.73e-14;10!UBERON:0005564;1.73e-14;10!CL:0000031;4.60e-11;6!CL:0000954;3.43e-09;2!CL:0000051;7.75e-08;53 | |||
|ontology_enrichment_disease=DOID:3493!6.39e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.15e-25;10!DOID:0060073;4.72e-17;1!DOID:8675;4.72e-17;1!DOID:2152;5.53e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.15e-25,10;DOID:0060073,4.72e-17,1;DOID:8675,4.72e-17,1;DOID:2152,5.53e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0000007!2.15e-07!2;UBERON:0004177!6.00e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.53e-17;1!UBERON:0004909;3.71e-09;2!UBERON:0000473;1.34e-08;8!UBERON:0000991;3.38e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.53e-17,1;UBERON:0004909,3.71e-09,2;UBERON:0000473,1.53e-08,8;UBERON:0000991,3.65e-07,21;UBERON:0009196,3.65e-07,21;UBERON:0009117,3.65e-07,21;UBERON:0005564,3.65e-07,21;UBERON:0004176,7.32e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,3.79589282843478,4.40724620711007,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,1.32208974556972,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.132529768321485,0.69716365721711,0.932949495138334,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,7.66310114705797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28602518772015,1.37539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,6.48761504427195,0.294450700845729,0.121917924982269,0,0,0,0,0.233939463462106,0.795803100645473,0,0,0.769583617218004,0.301925687133347,0,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815910637935854,0,1.01084389488329,2.005660314339,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr17:74965032..74965049,- | |||
}} |
Revision as of 17:32, 20 January 2014
Short description: | p@chr17:74965032..74965049, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74965032..74965049, - |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.22e-23 | 24 |
pro-B cell | 8.22e-23 | 24 |
B-1 B cell | 4.72e-17 | 1 |
serous secreting cell | 5.53e-17 | 1 |
neuron | 4.16e-11 | 6 |
neuroblast | 4.16e-11 | 6 |
electrically signaling cell | 4.16e-11 | 6 |
B cell | 1.84e-10 | 14 |
lymphoid lineage restricted progenitor cell | 1.99e-10 | 52 |
lymphocyte | 3.17e-10 | 53 |
common lymphoid progenitor | 3.17e-10 | 53 |
germ line cell | 1.24e-09 | 7 |
germ cell | 1.24e-09 | 7 |
mature B cell | 3.43e-09 | 2 |
pre-B-II cell | 3.43e-09 | 2 |
transitional stage B cell | 3.43e-09 | 2 |
small pre-B-II cell | 3.43e-09 | 2 |
immature B cell | 3.43e-09 | 2 |
seromucus secreting cell | 3.71e-09 | 2 |
neuronal stem cell | 1.47e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 5.53e-17 | 1 |
epithelium of gonad | 3.71e-09 | 2 |
testis | 1.53e-08 | 8 |
gonad | 3.65e-07 | 21 |
indifferent external genitalia | 3.65e-07 | 21 |
indifferent gonad | 3.65e-07 | 21 |
gonad primordium | 3.65e-07 | 21 |
external genitalia | 7.32e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.15e-25 | 10 |
lymphatic system cancer | 4.72e-17 | 1 |
lymphosarcoma | 4.72e-17 | 1 |
ovary epithelial cancer | 5.53e-17 | 1 |