FFCP PHASE1:Hg19::chr17:7462297..7462342,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11928 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=193bp_to_ENST00000396545_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_1_at_TNFSF13_5end | |||
|id=chr17:7462297..7462342,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.84e-44!112;CL:0000049!3.84e-44!112;CL:0000766!4.63e-42!76;CL:0000037!1.65e-39!172;CL:0000566!1.65e-39!172;CL:0002009!2.62e-38!65;CL:0002194!7.62e-38!63;CL:0000576!7.62e-38!63;CL:0000040!7.62e-38!63;CL:0000559!7.62e-38!63;CL:0000557!8.10e-38!71;CL:0000839!2.71e-37!70;CL:0002032!7.26e-36!165;CL:0000837!7.26e-36!165;CL:0000988!1.44e-34!182;CL:0000738!1.01e-33!140;CL:0002057!2.70e-33!42;CL:0000860!1.34e-29!45;CL:0002087!5.95e-28!119;CL:0002031!1.28e-27!124;CL:0002393!3.07e-09!9;CL:0002397!3.07e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.91e-28;39!CL:0000234;7.91e-28;39!CL:0000576;2.41e-27;48!CL:0000860;7.23e-27;33!CL:0002057;7.23e-27;33!CL:0000766;5.34e-21;69!CL:0000763;1.95e-14;100!CL:0002087;4.11e-10;104!CL:0000738;2.00e-09;136!CL:0000235;1.04e-07;6!CL:0002393;1.38e-07;6!CL:0002397;1.38e-07;6!CL:0000094;2.36e-07;8!CL:0000988;4.84e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.88e-50,72;CL:0002009,3.34e-50,61;CL:0002194,9.54e-50,59;CL:0000576,9.54e-50,59;CL:0000040,9.54e-50,59;CL:0000559,9.54e-50,59;CL:0000763,7.06e-48,108;CL:0000049,7.06e-48,108;CL:0000557,3.10e-45,67;CL:0000473,3.57e-45,48;CL:0000234,3.57e-45,48;CL:0000839,1.27e-44,66;CL:0000037,1.21e-42,168;CL:0000860,9.18e-39,42;CL:0002057,9.18e-39,42;CL:0002032,2.16e-38,161;CL:0000837,2.16e-38,161;CL:0000988,2.32e-38,177;CL:0000738,6.11e-38,136;CL:0002087,4.80e-35,115;CL:0002031,6.59e-32,120;CL:0002393,1.48e-10,9;CL:0002397,1.48e-10,9;CL:0000235,1.05e-07,6;CL:0000094,2.17e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.94e-28;42!CL:0000049;6.64e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-46!115;UBERON:0002390!9.60e-38!102;UBERON:0003061!9.60e-38!102;UBERON:0002193!1.74e-33!112;UBERON:0002371!1.39e-31!80;UBERON:0001474!2.64e-27!86;UBERON:0002405!4.93e-21!115;UBERON:0004765!1.94e-20!101;UBERON:0001434!1.94e-20!101;UBERON:0001049!1.28e-13!57;UBERON:0005068!1.28e-13!57;UBERON:0006241!1.28e-13!57;UBERON:0007135!1.28e-13!57;UBERON:0003080!1.47e-11!42;UBERON:0002780!4.28e-11!41;UBERON:0001890!4.28e-11!41;UBERON:0006240!4.28e-11!41;UBERON:0002616!7.84e-11!59;UBERON:0003081!1.67e-10!216;UBERON:0002020!2.28e-09!34;UBERON:0003528!2.28e-09!34;UBERON:0001893!3.88e-09!34;UBERON:0002791!7.53e-09!33;UBERON:0000955!9.63e-09!69;UBERON:0006238!9.63e-09!69;UBERON:0003075!1.91e-08!86;UBERON:0007284!1.91e-08!86;UBERON:0001869!2.70e-08!32;UBERON:0001017!5.74e-08!82;UBERON:0002346!9.97e-08!90;UBERON:0000479!1.40e-07!787;UBERON:0002204!1.43e-07!167;UBERON:0005743!1.64e-07!86;UBERON:0002619!1.82e-07!22;UBERON:0000178!3.03e-07!15;UBERON:0000179!3.03e-07!15;UBERON:0000463!3.03e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.38e-13;114!UBERON:0001893;5.69e-09;34!UBERON:0002780;6.14e-09;41!UBERON:0001890;6.14e-09;41!UBERON:0003528;9.15e-09;34!UBERON:0002020;9.15e-09;34!UBERON:0000073;1.08e-08;53!UBERON:0002616;1.08e-08;53!UBERON:0000178;1.45e-08;15!UBERON:0000179;1.45e-08;15!UBERON:0000463;1.45e-08;15!UBERON:0002791;1.85e-08;32!UBERON:0001869;2.75e-08;32!UBERON:0002619;6.04e-08;22!UBERON:0001950;6.99e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.93e-51,114;UBERON:0002390,3.25e-46,98;UBERON:0003061,3.25e-46,98;UBERON:0002193,1.06e-41,108;UBERON:0002371,2.05e-38,76;UBERON:0002405,9.65e-34,93;UBERON:0001474,1.05e-33,82;UBERON:0004765,1.84e-28,90;UBERON:0001434,5.04e-24,100;UBERON:0003081,7.27e-17,203;UBERON:0001049,1.52e-14,56;UBERON:0005068,1.52e-14,56;UBERON:0006241,1.52e-14,56;UBERON:0007135,1.52e-14,56;UBERON:0000073,5.83e-14,53;UBERON:0002616,5.83e-14,53;UBERON:0002780,9.42e-12,41;UBERON:0001890,9.42e-12,41;UBERON:0003080,9.42e-12,41;UBERON:0006240,9.42e-12,41;UBERON:0003528,2.00e-10,34;UBERON:0002020,2.00e-10,34;UBERON:0001893,3.69e-10,34;UBERON:0002791,2.10e-09,32;UBERON:0000955,2.45e-09,68;UBERON:0006238,2.45e-09,68;UBERON:0000479,2.72e-09,773;UBERON:0001869,3.50e-09,32;UBERON:0003075,1.15e-08,82;UBERON:0007284,1.15e-08,82;UBERON:0000178,1.43e-08,15;UBERON:0000179,1.43e-08,15;UBERON:0000463,1.43e-08,15;UBERON:0001017,1.77e-08,81;UBERON:0002204,2.68e-08,167;UBERON:0002619,6.60e-08,22;UBERON:0002346,1.06e-07,86;UBERON:0001016,7.23e-07,89;UBERON:0001950,7.79e-07,20 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0,0,0,0,4.03395087871065,0,0,0,0,0,0,0,0,0,0,0,0,138.070861173965,61.0288742974568,132.677417681877,0,0,0,0,0,28.1856421761453,125.202962328204,101.676034867362,113.279674513675,249.889669251756,205.024690590014,236.454371088183,48.2722152748155,32.8752071009264,40.7541222795531,46.7182364180426,22.2030659531786,41.1909473290488,55.2369393258529,36.3748203271323,65.5055776791381,61.7094768518547,36.7926269642781,69.0675081631143,53.8373091091849,19.1034305040492,32.1354582756471,41.6274093624427,24.3906060577831,41.5569131769377,56.7344236321152,37.6986312904884,43.9011493048675,39.4684564534874,17.0215567407342,24.2900677108274,69.5958802761179,50.5838430867595,69.7176191503424,30.8753746343018,30.5670437869679,39.5577984301106,269.984255906662,269.157043755745,264.798869277079,279.361305661333,313.719529145907,193.031429623193,177.847952094539,170.47159235962,176.818900844166,12.3197371122926,14.1996038928154,5.33705552318133,23.0434320185914,12.4122755981164,12.0698012390441,18.5092564379761,8.58648379081828,1.70763890732835,8.22132065119314,5.73409842187843,7.93027971474155,9.52864557068611,25.0214880536323,0.590129310341499,0,1.23360899399706,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0,0,0,3.18565414324097,0,0,6.17357988218868,4.8634912238679,12.4930726552346,8.52398107358461,0.821127996921047,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0.263504357079378,12.5739912477804,0.364295288292542,0,10.7100639906045,14.6268979331384,33.505406050754,25.0415155520609,49.191562327091,26.3734825943991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,3.87780264148325,0,0,0,0,0,4.965357350777,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,1.26755034821831,3.9313088667105,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,333.377826242336,86.3475738363787,287.898561353267,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,0.144119953416961,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,248.112512508029,334.000965802364,162.342133401934,0,0,0,0,0,0,0,6.10795356625974,0.646882724578552,7.7005821767849,0,0,0,0.837581326671744,0,17.9761685747324,26.9245313283622,21.1351911852378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.1958812475021,88.6585365364515,61.9019835259977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,4.82371728621056,3.39866086332371,0,0,0,11.0253882463063,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.426133137080504,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,2.01090682660736,0,10.638249487776,0,0,0,0,40.5958087385735,38.2318603571188,47.8503637226297,35.9729980941261,50.5975595896019,37.6114520491776,32.941917671525,47.5875105776562,0,0,0,0,0,0,0,5.18906365725323,53.0469875266656,2.75175657541048,0.324621940274555,49.1395061698553,4.56469358066384,4.23035718587163,37.5951715635101,4.74016977844489,16.2193955854737,27.8483595923646,8.94277099149685,13.7402137902306,3.07240764308458,4.69719826574073,5.67287081820489,40.0545595574183,0,0,0,0,0,0.18714054040822,19.33907966389,0,0,0,0.47748896947538,4.45447021248958,0,2.98244294329889,7.31480965334666,0,0,0,7.17292757703851,4.42054264849836,0,0,0,0,0,0.179021174675609,12.2777368854449,2.07151151837561,47.896618469388,0,0.969332746095218,6.58653496949144,5.98841394003583,0,0,9.42499448065232,0,0.508507300585533,0,0,0.583209226766509,0,6.20018970069687,7.71817207202611,4.5774520895125,1.76926815889959,1.77328571372128,3.94893714877151,0.10893846351899,0,6.00212016329617,0,0,0,0,4.14701507651495,0.274792780205587,9.06159119231679,0,3.1396051279005,0.831058409500782,0,0,0,0,0.317873157960757,0,0,0,0,0,5.74974169271705,3.05515072466813,0,0,0,5.32468950547349,0.802577647298789,1.1713222286267,0,0,0,1.97292201424695,0,1.53036380815245,59.2690116915217,0,0,0,0,0,0,2.27687636823834,0,0,0,0,8.91106008034354,0,0,0,0,3.78257164304836,0,6.32746074185491,0,0,2.84898581801454,0,0,2.98834192635094,0,0.432271251462318,0,0,0,0,1.17847017308398,0,0,0,0,5.4037825983881,14.6488755414433,28.1042493747339,0,0,3.0721064139948,2.97908551215189,5.74298419661451,3.59422200898184,6.86761677018513,7.81100101046554,2.5529719544956,0,0,0,0,0,0,0,11.1332156573302,8.98942480336399,0,0,0,1.1248694577575,4.6428117273477,2.79447960626913,0,17.6524784350204,3.14727528809989,0,0,0,5.71756261098694,3.31045985182716,0,0,0,0,0,0.246277562248017,0,0,3.81035807563014,0,6.07629894899288,13.6199579794971,0,0,39.6181300626147,6.4453765090863,46.3947741988859,64.9977488573656,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,1.31149052283922,0,5.31640907980192,3.05065662254908,5.13282815896649,6.88091034828085,12.2021956690538,8.258821591204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,4.97730370146231,0,0.265729680626726,0.327130788511688,0,0,0,0,7.25503761920158,0,0,0,0,3.11038630016486,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,2.95454435443714,4.25089728976755,8.14132681191471,3.89721092057435,0.252071696221718,3.59617712813933,3.87541549516443,1.42769420259154,0,0,0,0,0,0,0,5.03909199940024,0,4.68908406739856,0,0.163771917510097,0,3.71456715401171,3.12431239445539,5.58054350553197,2.21955335678674,1.09394961803644,3.28954660114309,3.96968942711435,0,0.638812138197976,0.535701835878287,4.03540466662589,2.42786241694653,3.64259506162076,7.5397014638243,0,0,3.12660771693426,3.55172977239385,0,0,6.51492670659266,3.61365856806804,0,0.913158720509496,0,0,9.43490383131864,0,0,0,0,0,0,0,4.30227358820278,0,0,5.50403165248208,0.9164274741762,0,0,0.335566295393377,0.098150233615243,0.121917924982269,3.23714418593947,4.20917508110613,0,1.94284397223656,0,0.198950775161368,0,0,0,0.301925687133347,3.39566295674957,1.09279780251979,0,2.45148321753905,0,8.04864715171276,17.228691218971,0,0,21.5223172173865,8.37952543656503,0,0,0,0.160482733378337,0.730336388246517,5.96348068425903,12.9005624836306,0,4.01149792126397,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,6.44118934855035,0.267964130156178,4.97501663675268,11.4810625406704,5.11761556562354,1.1903221573187,2.51896748360424,5.21427600085206,0,4.9008311874187,1.0105859447911,3.04803447055746,1.02669990325584,5.45551629418159,10.0411087549747,3.99192427855216,0,0,0,0,2.34640942403454,1.58913877437726,1.22068853494722,1.33151354837103,13.0827965834167,0 | |||
|short_description=p1@TNFSF13 | |||
}} |
Revision as of 13:34, 20 January 2014
Short description: | p1@TNFSF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFSF13_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 193bp_to_ENST00000396545_5end |
EntrezGene: | TNFSF13 |
HGNC: | 11928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.88e-50 | 72 |
macrophage dendritic cell progenitor | 3.34e-50 | 61 |
monopoietic cell | 9.54e-50 | 59 |
monocyte | 9.54e-50 | 59 |
monoblast | 9.54e-50 | 59 |
promonocyte | 9.54e-50 | 59 |
myeloid cell | 7.06e-48 | 108 |
common myeloid progenitor | 7.06e-48 | 108 |
granulocyte monocyte progenitor cell | 3.10e-45 | 67 |
defensive cell | 3.57e-45 | 48 |
phagocyte | 3.57e-45 | 48 |
myeloid lineage restricted progenitor cell | 1.27e-44 | 66 |
hematopoietic stem cell | 1.21e-42 | 168 |
classical monocyte | 9.18e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.18e-39 | 42 |
hematopoietic oligopotent progenitor cell | 2.16e-38 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-38 | 161 |
hematopoietic cell | 2.32e-38 | 177 |
leukocyte | 6.11e-38 | 136 |
nongranular leukocyte | 4.80e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 6.59e-32 | 120 |
intermediate monocyte | 1.48e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.48e-10 | 9 |
macrophage | 1.05e-07 | 6 |
granulocyte | 2.17e-07 | 8 |