FFCP PHASE1:Hg19::chr17:74557133..74557167,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=677849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32676 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_NR_004396,uc010dgy.1_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_SNORD1B_5end | |||
|id=chr17:74557133..74557167,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-43!140;CL:0002087!6.60e-38!119;CL:0002057!1.16e-32!42;CL:0002031!1.50e-32!124;CL:0000037!8.13e-32!172;CL:0000566!8.13e-32!172;CL:0002032!3.70e-31!165;CL:0000837!3.70e-31!165;CL:0000988!4.46e-30!182;CL:0000766!1.50e-29!76;CL:0000860!1.71e-29!45;CL:0002194!4.69e-24!63;CL:0000576!4.69e-24!63;CL:0000040!4.69e-24!63;CL:0000559!4.69e-24!63;CL:0002009!7.65e-23!65;CL:0000839!3.60e-21!70;CL:0000557!1.18e-20!71;CL:0000763!1.10e-18!112;CL:0000049!1.10e-18!112;CL:0000219!1.04e-13!390;CL:0000838!3.94e-12!52;CL:0000542!1.02e-11!53;CL:0000051!1.02e-11!53;CL:0000134!5.22e-11!358;CL:0002320!3.11e-10!365;CL:0000094!3.72e-10!8;CL:0000791!1.67e-08!18;CL:0000789!1.67e-08!18;CL:0002420!1.67e-08!18;CL:0002419!1.67e-08!18;CL:0000790!1.67e-08!18;CL:0000081!2.65e-08!11;CL:0000084!4.64e-07!25;CL:0000827!4.64e-07!25;CL:0000624!4.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-36;33!CL:0002057;1.35e-36;33!CL:0000473;2.68e-30;39!CL:0000234;2.68e-30;39!CL:0000576;4.79e-19;48!CL:0000766;1.04e-17;69!CL:0000094;9.80e-17;8!CL:0002087;2.97e-12;104!CL:0000081;7.39e-12;11!CL:0000775;9.31e-10;3!CL:0000763;9.56e-10;100!CL:0000148;1.20e-09;10!CL:0002567;5.19e-09;3!CL:0000623;7.21e-09;3!CL:0000738;2.50e-08;136!CL:0000624;2.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.57e-40,136;CL:0000766,2.04e-38,72;CL:0000860,3.91e-36,42;CL:0002057,3.91e-36,42;CL:0000473,4.44e-36,48;CL:0000234,4.44e-36,48;CL:0002087,4.40e-33,115;CL:0002032,4.68e-32,161;CL:0000837,4.68e-32,161;CL:0000037,1.02e-31,168;CL:0002194,1.67e-29,59;CL:0000576,1.67e-29,59;CL:0000040,1.67e-29,59;CL:0000559,1.67e-29,59;CL:0002031,1.69e-29,120;CL:0000988,1.94e-29,177;CL:0002009,2.70e-28,61;CL:0000763,1.15e-25,108;CL:0000049,1.15e-25,108;CL:0000839,1.36e-25,66;CL:0000557,4.22e-25,67;CL:0000094,7.21e-17,8;CL:0000219,9.26e-14,386;CL:0000081,5.95e-12,11;CL:0000134,1.37e-11,354;CL:0002320,4.17e-11,361;CL:0000775,9.47e-10,3;CL:0000148,9.97e-10,10;CL:0000541,9.97e-10,10;CL:0002567,4.35e-09,3;CL:0000623,6.40e-09,3;CL:0000825,6.40e-09,3;CL:0000048,2.28e-07,427;CL:0000034,3.20e-07,441;CL:0000624,3.53e-07,6;CL:0000723,4.34e-07,433;CL:0000838,8.47e-07,52;CL:0000147,9.94e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;7.59e-26;42!CL:0000049;2.28e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.70e-27!102;UBERON:0003061!5.70e-27!102;UBERON:0002193!1.53e-24!112;UBERON:0002371!1.42e-18!80;UBERON:0001474!3.91e-17!86;UBERON:0002405!2.04e-14!115;UBERON:0004765!6.82e-14!101;UBERON:0001434!6.82e-14!101;UBERON:0002384!6.66e-10!375;UBERON:0000178!5.67e-09!15;UBERON:0000179!5.67e-09!15;UBERON:0000463!5.67e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.78e-08;15!UBERON:0000179;5.78e-08;15!UBERON:0000463;5.78e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.07e-29,98;UBERON:0003061,6.07e-29,98;UBERON:0002193,2.34e-25,108;UBERON:0002371,2.96e-21,76;UBERON:0001474,3.67e-19,82;UBERON:0002405,6.41e-19,93;UBERON:0004765,8.27e-17,90;UBERON:0001434,1.27e-15,100;UBERON:0002384,1.90e-10,371;UBERON:0003081,3.99e-09,203;UBERON:0000178,5.76e-08,15;UBERON:0000179,5.76e-08,15;UBERON:0000463,5.76e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.229240217243854,0.328402357799783,0.236132343941038,1.57345710739562,3.45446458287491,0.619264493264304,0,0,0,0.0774672005803016,0,0,0,1.80490002723128,0.434021741431704,0,1.29557466407592,0.515151135268373,0.436194716338694,0,0.242584061187816,1.39457422143411,2.05583944010913,1.85823822537062,9.20615655430881,10.5025889676931,13.2430048737608,7.23965929546899,12.2642089880927,4.06279459783025,0.376484679085209,0.545812300115692,0.449446968890169,10.7129362329816,14.4418062184242,17.9014395223732,9.56568770541477,11.5688921420546,8.52449501065388,1.7412554317715,1.13477044938228,1.24564449799115,15.8286659111748,10.9511412868242,10.8594422352558,0.605399502633369,4.05105399586321,1.26584954976354,0.211255286311942,1.06302149982522,0.838634582033504,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,1.76171156811282,1.14681968437569,0,1.12101712596307,0,1.180258620683,1.17903228824749,2.05601498999509,0,0.32592226663359,0,0,0.445641827540694,0.883817722424512,2.21533894583621,0.541607727530031,0,0,0,0,0,0,0,0,0,4.21542542962113,2.40539211837841,5.56643322442906,0.637130828648193,0.651083453856419,0,0.301150238155546,0,0,0.473554504088034,0,3.42731463482045,4.54648332831962,2.60683926989038,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20190447125277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.444485260045183,3.05590740446622,7.03304683260282,1.71072446022705,4.8328921570562,1.50171528921959,18.292891688357,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,2.56139988262505,2.58753089831421,2.43851768931522,0,0,0,0,0,5.24304916763028,8.97484377612075,9.11714129559278,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.620304078368662,0.431428401637234,2.45473382947922,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,5.07447609232169,3.0585488285695,0.569647187174163,1.19115887728894,1.64544909234478,2.59389324477087,2.16012574895246,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,2.73460934032803,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,1.05154941711726,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0.138348634936231,0.124980407962107,4.09452617362449,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,1.09109195521536,0.214821114084977,0.928067519756987,0,0,0,0,0,0,0.428883182749851,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0,0,0.911579868532147,0,0.389720617678777,0.398594520940089,1.63565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.0644578879735772,1.59905849479886,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p1@SNORD1B | |||
}} |
Revision as of 17:29, 20 January 2014
Short description: | p1@SNORD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD1B_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -22bp_to_NR_004396, uc010dgy.1_5end |
EntrezGene: | SNORD1B |
HGNC: | 32676 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.07e-29 | 98 |
blood island | 6.07e-29 | 98 |
hemolymphoid system | 2.34e-25 | 108 |
bone marrow | 2.96e-21 | 76 |
bone element | 3.67e-19 | 82 |
immune system | 6.41e-19 | 93 |
skeletal element | 8.27e-17 | 90 |
skeletal system | 1.27e-15 | 100 |
connective tissue | 1.90e-10 | 371 |
lateral plate mesoderm | 3.99e-09 | 203 |
blood | 5.76e-08 | 15 |
haemolymphatic fluid | 5.76e-08 | 15 |
organism substance | 5.76e-08 | 15 |