FFCP PHASE1:Hg19::chr17:73389834..73389850,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4566 | |||
|TSSclassifier=strong | |||
|UniProt=P62993 | |||
|association_with_transcript=94bp_to_ENST00000392564_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_4_at_GRB2_5end | |||
|id=chr17:73389834..73389850,- | |||
|ontology_enrichment_celltype=CL:0002319!2.72e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.13e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.91e-11,25;CL:0000047,1.71e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.28e-17!659;UBERON:0000922!1.22e-12!612;UBERON:0000467!1.43e-12!625;UBERON:0000475!2.15e-12!365;UBERON:0000480!2.91e-12!626;UBERON:0001017!4.36e-12!82;UBERON:0000073!1.09e-11!94;UBERON:0001016!1.09e-11!94;UBERON:0005743!1.29e-11!86;UBERON:0004121!2.21e-10!169;UBERON:0000923!2.54e-10!604;UBERON:0005291!2.54e-10!604;UBERON:0006598!2.54e-10!604;UBERON:0002532!2.54e-10!604;UBERON:0002050!2.59e-10!605;UBERON:0005423!2.59e-10!605;UBERON:0000924!2.91e-10!173;UBERON:0006601!2.91e-10!173;UBERON:0000955!2.40e-08!69;UBERON:0006238!2.40e-08!69;UBERON:0000119!2.97e-08!312;UBERON:0000483!3.10e-08!309;UBERON:0000062!1.33e-07!511;UBERON:0004111!1.38e-07!241;UBERON:0000481!2.32e-07!347;UBERON:0000025!3.25e-07!194;UBERON:0001049!4.17e-07!57;UBERON:0005068!4.17e-07!57;UBERON:0006241!4.17e-07!57;UBERON:0007135!4.17e-07!57;UBERON:0000033!8.36e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.78e-13,89;UBERON:0001017,3.07e-12,81;UBERON:0004121,1.42e-09,171;UBERON:0000924,1.42e-09,171;UBERON:0006601,1.42e-09,171;UBERON:0000922,7.75e-09,592;UBERON:0000955,2.13e-08,68;UBERON:0006238,2.13e-08,68;UBERON:0011216,3.62e-08,223;UBERON:0005423,5.75e-07,581;UBERON:0001049,5.96e-07,56;UBERON:0005068,5.96e-07,56;UBERON:0006241,5.96e-07,56;UBERON:0007135,5.96e-07,56;UBERON:0003075,6.68e-07,82;UBERON:0007284,6.68e-07,82 | |||
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| |||
|short_description=p4@GRB2 | |||
}} |
Revision as of 17:18, 20 January 2014
Short description: | p4@GRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRB2_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 94bp_to_ENST00000392564_5end |
EntrezGene: | GRB2 |
HGNC: | 4566 |
UniProt: | P62993 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.91e-11 | 25 |
neuronal stem cell | 1.71e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.78e-13 | 89 |
central nervous system | 3.07e-12 | 81 |
ectoderm-derived structure | 1.42e-09 | 171 |
ectoderm | 1.42e-09 | 171 |
presumptive ectoderm | 1.42e-09 | 171 |
embryo | 7.75e-09 | 592 |
brain | 2.13e-08 | 68 |
future brain | 2.13e-08 | 68 |
organ system subdivision | 3.62e-08 | 223 |
developing anatomical structure | 5.75e-07 | 581 |
neural tube | 5.96e-07 | 56 |
neural rod | 5.96e-07 | 56 |
future spinal cord | 5.96e-07 | 56 |
neural keel | 5.96e-07 | 56 |
neural plate | 6.68e-07 | 82 |
presumptive neural plate | 6.68e-07 | 82 |