FFCP PHASE1:Hg19::chr17:7155010..7155070,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19085 | |||
|TSSclassifier=strong | |||
|UniProt=O95476 | |||
|association_with_transcript=-15bp_to_NM_001143775,uc002gfc.2,uc002gfd.2_5end | |||
|description=CAGE_peak_2_at_CTDNEP1_5end | |||
|id=chr17:7155010..7155070,- | |||
|ontology_enrichment_celltype=CL:0000055!1.63e-08!180;CL:0000183!2.15e-08!59;CL:0000222!8.04e-08!119;CL:0000192!9.14e-08!42;CL:0000514!9.14e-08!42;CL:0002371!1.99e-07!591;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0000187!3.67e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.79e-08,121;CL:0000192,5.70e-08,43;CL:0000514,5.70e-08,43;CL:0000680,1.29e-07,58;CL:0000056,1.29e-07,58;CL:0000355,1.29e-07,58;CL:0000187,2.34e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.81e-11!83;UBERON:0002329!5.81e-11!83;UBERON:0003077!5.81e-11!83;UBERON:0003059!5.81e-11!83;UBERON:0007282!5.81e-11!83;UBERON:0009618!5.81e-11!83;UBERON:0007285!5.81e-11!83;UBERON:0001009!2.10e-10!113;UBERON:0004535!3.59e-10!110;UBERON:0004290!5.29e-10!70;UBERON:0000486!2.15e-09!82;UBERON:0000479!2.25e-08!787;UBERON:0001134!7.77e-08!61;UBERON:0002036!7.77e-08!61;UBERON:0003082!7.77e-08!61;UBERON:0004872!2.55e-07!84;UBERON:0002385!2.57e-07!63;UBERON:0001015!2.57e-07!63;UBERON:0000383!2.57e-07!63;UBERON:0001637!9.60e-07!42;UBERON:0003509!9.60e-07!42;UBERON:0004572!9.60e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.64e-12,78;UBERON:0001009,3.06e-10,112;UBERON:0007524,3.13e-10,73;UBERON:0003077,3.26e-10,72;UBERON:0007285,3.26e-10,72;UBERON:0002329,3.29e-10,71;UBERON:0003059,3.29e-10,71;UBERON:0007282,3.29e-10,71;UBERON:0004290,3.29e-10,71;UBERON:0009618,3.29e-10,71;UBERON:0004535,5.21e-10,109;UBERON:0000486,1.36e-09,83;UBERON:0000926,2.12e-08,315;UBERON:0004120,2.12e-08,315;UBERON:0006603,2.12e-08,315;UBERON:0001134,4.94e-08,62;UBERON:0002036,4.94e-08,62;UBERON:0003082,4.94e-08,62;UBERON:0000479,5.01e-08,773;UBERON:0002385,1.66e-07,64;UBERON:0001015,1.66e-07,64;UBERON:0000383,1.66e-07,64;UBERON:0004872,3.60e-07,83;UBERON:0001637,9.60e-07,42;UBERON:0003509,9.60e-07,42;UBERON:0004572,9.60e-07,42 | |||
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| |||
|short_description=p2@CTDNEP1 | |||
}} |
Revision as of 13:28, 20 January 2014
Short description: | p2@CTDNEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTDNEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_NM_001143775, uc002gfc.2, uc002gfd.2_5end |
EntrezGene: | CTDNEP1 |
HGNC: | 19085 |
UniProt: | O95476 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.79e-08 | 121 |
smooth muscle cell | 5.70e-08 | 43 |
smooth muscle myoblast | 5.70e-08 | 43 |
muscle precursor cell | 1.29e-07 | 58 |
myoblast | 1.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-07 | 58 |
muscle cell | 2.34e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.64e-12 | 78 |
circulatory system | 3.06e-10 | 112 |
dense mesenchyme tissue | 3.13e-10 | 73 |
paraxial mesoderm | 3.26e-10 | 72 |
presumptive paraxial mesoderm | 3.26e-10 | 72 |
somite | 3.29e-10 | 71 |
presomitic mesoderm | 3.29e-10 | 71 |
presumptive segmental plate | 3.29e-10 | 71 |
dermomyotome | 3.29e-10 | 71 |
trunk paraxial mesoderm | 3.29e-10 | 71 |
cardiovascular system | 5.21e-10 | 109 |
multilaminar epithelium | 1.36e-09 | 83 |
mesoderm | 2.12e-08 | 315 |
mesoderm-derived structure | 2.12e-08 | 315 |
presumptive mesoderm | 2.12e-08 | 315 |
skeletal muscle tissue | 4.94e-08 | 62 |
striated muscle tissue | 4.94e-08 | 62 |
myotome | 4.94e-08 | 62 |
tissue | 5.01e-08 | 773 |
muscle tissue | 1.66e-07 | 64 |
musculature | 1.66e-07 | 64 |
musculature of body | 1.66e-07 | 64 |
splanchnic layer of lateral plate mesoderm | 3.60e-07 | 83 |
artery | 9.60e-07 | 42 |
arterial blood vessel | 9.60e-07 | 42 |
arterial system | 9.60e-07 | 42 |