FFCP PHASE1:Hg19::chr17:5487373..5487386,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14374 | |||
|TSSclassifier=weak | |||
|UniProt=E9PE50 | |||
|association_with_transcript=442bp_to_ENST00000544378_5end | |||
|description=CAGE_peak_5_at_NLRP1_5end | |||
|id=chr17:5487373..5487386,- | |||
|ontology_enrichment_celltype=CL:0002368!1.57e-10!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.60e-30;13!CL:0000307;2.34e-19;3!CL:0002621;6.10e-19;3!CL:0002202;4.17e-17;9!CL:0002632;4.17e-17;9!CL:1000306;1.65e-14;4!CL:0002547;1.65e-14;4!CL:0000317;1.60e-13;2!CL:1000448;1.60e-13;2!CL:0002308;1.60e-13;2!CL:0002140;1.60e-13;2!CL:0002076;3.04e-13;42!CL:0000362;2.66e-11;9!CL:0002328;3.51e-09;3!CL:0002592;5.96e-09;3!CL:0002581;2.49e-07;1!CL:0002159;2.70e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.93e-30,13;CL:0000068,2.15e-19,3;CL:0000069,2.15e-19,3;CL:0000307,2.15e-19,3;CL:0000377,2.15e-19,3;CL:0002621,4.52e-19,3;CL:0002202,2.66e-17,9;CL:0002632,2.66e-17,9;CL:0002076,5.27e-16,42;CL:1000306,2.29e-14,4;CL:0002547,2.29e-14,4;CL:0000317,1.51e-13,2;CL:1000448,1.51e-13,2;CL:0002308,1.51e-13,2;CL:0002140,1.51e-13,2;CL:0000362,3.14e-11,9;CL:0000223,5.09e-11,58;CL:0002328,2.15e-09,3;CL:0002592,4.88e-09,3;CL:0002321,3.28e-08,250;CL:0002581,1.83e-07,1;CL:0002159,2.99e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000377;2.34e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;5.51e-13;2!DOID:962;5.51e-13;2!DOID:1192;5.96e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,8.46e-13,2;DOID:962,8.46e-13,2;DOID:1192,7.91e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0001637!4.42e-09!42;UBERON:0003509!4.42e-09!42;UBERON:0004572!4.42e-09!42;UBERON:0000947!8.10e-09!21;UBERON:0010191!8.10e-09!21;UBERON:0000055!5.75e-08!69;UBERON:0001981!6.56e-08!60;UBERON:0007500!6.56e-08!60;UBERON:0004537!6.56e-08!60;UBERON:0006965!6.56e-08!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.10e-19;3!UBERON:0004797;1.65e-14;4!UBERON:0000415;1.65e-14;4!UBERON:0007240;1.65e-14;4!UBERON:0005742;1.65e-14;4!UBERON:0005734;1.65e-14;4!UBERON:0004664;1.65e-14;4!UBERON:0004663;1.65e-14;4!UBERON:0002419;1.60e-13;2!UBERON:0007771;1.60e-13;2!UBERON:0003297;1.60e-13;2!UBERON:0001821;1.60e-13;2!UBERON:0003487;1.60e-13;2!UBERON:0001820;1.60e-13;2!UBERON:0004573;7.15e-11;33!UBERON:0004571;7.15e-11;33!UBERON:0007196;3.52e-10;15!UBERON:0001558;3.52e-10;15!UBERON:0000947;6.44e-10;21!UBERON:0010191;6.44e-10;21!UBERON:0001637;8.79e-10;42!UBERON:0003509;8.79e-10;42!UBERON:0004572;8.79e-10;42!UBERON:0004815;3.51e-09;3!UBERON:0002031;3.51e-09;3!UBERON:0010371;5.23e-09;31!UBERON:0003498;5.96e-09;3!UBERON:0005985;5.96e-09;3!UBERON:0001621;5.96e-09;3!UBERON:0003126;1.39e-08;7!UBERON:0001005;1.39e-08;7!UBERON:0003929;2.07e-08;7!UBERON:0000486;2.74e-08;12!UBERON:0003350;2.06e-07;8!UBERON:0001828;2.06e-07;8!UBERON:0001003;8.20e-07;15!UBERON:0007376;8.20e-07;15!UBERON:0004807;8.99e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.52e-19,3;UBERON:0000415,2.29e-14,4;UBERON:0007240,2.29e-14,4;UBERON:0005742,2.29e-14,4;UBERON:0005734,2.29e-14,4;UBERON:0004664,2.29e-14,4;UBERON:0004663,2.29e-14,4;UBERON:0002419,1.51e-13,2;UBERON:0007771,1.51e-13,2;UBERON:0003297,1.51e-13,2;UBERON:0001821,1.51e-13,2;UBERON:0003487,1.51e-13,2;UBERON:0001820,1.51e-13,2;UBERON:0005089,1.51e-13,2;UBERON:0005088,1.51e-13,2;UBERON:0004573,2.35e-13,33;UBERON:0004571,2.35e-13,33;UBERON:0007196,2.71e-10,15;UBERON:0001558,2.71e-10,15;UBERON:0001637,3.48e-10,42;UBERON:0003509,3.48e-10,42;UBERON:0004572,3.48e-10,42;UBERON:0000947,7.48e-10,21;UBERON:0010191,7.48e-10,21;UBERON:0004815,2.15e-09,3;UBERON:0002031,2.15e-09,3;UBERON:0001621,4.88e-09,3;UBERON:0003126,1.34e-08,7;UBERON:0001005,1.34e-08,7;UBERON:0004797,2.02e-08,7;UBERON:0001004,3.38e-08,74;UBERON:0003350,1.84e-07,8;UBERON:0001828,1.84e-07,8;UBERON:0007500,7.66e-07,59;UBERON:0001981,7.66e-07,59;UBERON:0004537,7.66e-07,59;UBERON:0006965,7.66e-07,59;UBERON:0001003,9.01e-07,15;UBERON:0007376,9.01e-07,15;UBERON:0007383,9.01e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,1.83884244895785,2.71085326900425,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.434377689410233,0,0.368277635987565,0,0.422510572623884,0,0,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.393419540227666,0.393010762749165,0,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0,0.25618263945135,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.802320587350522,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,1.62028389576352,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,1.01304409331664,8.60659675285922,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0,1.20036438433761,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,1.73934767846967,2.18196896472668,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17051084552777,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,1.02341449813341,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.40101294060657,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16838984196555,1.30012049207304,0,0,0,0,0,0,0,0,0,4.46269271474641,4.61256161676255,3.57315594984836,0.50578890427775,0,1.25924938732256,0.6970372701606,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,1.2130948894399,1.58510321173008,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,2.11688647996127,1.34060455107157,3.26672954583968,0,1.72202149068492,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0.0607495566580247,0,0,0,0,0,0.383830394638891,0,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,1.11728983594649,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0.560659312903067,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p5@NLRP1 | |||
}} |
Revision as of 13:21, 20 January 2014
Short description: | p5@NLRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NLRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 442bp_to_ENST00000544378_5end |
EntrezGene: | NLRP1 |
HGNC: | 14374 |
UniProt: | E9PE50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.93e-30 | 13 |
duct epithelial cell | 2.15e-19 | 3 |
branched duct epithelial cell | 2.15e-19 | 3 |
tracheal epithelial cell | 2.15e-19 | 3 |
tracheoblast | 2.15e-19 | 3 |
gingival epithelial cell | 4.52e-19 | 3 |
epithelial cell of tracheobronchial tree | 2.66e-17 | 9 |
epithelial cell of lower respiratory tract | 2.66e-17 | 9 |
endo-epithelial cell | 5.27e-16 | 42 |
fibroblast of tunica adventitia of artery | 2.29e-14 | 4 |
fibroblast of the aortic adventitia | 2.29e-14 | 4 |
sebum secreting cell | 1.51e-13 | 2 |
epithelial cell of sweat gland | 1.51e-13 | 2 |
epithelial cell of skin gland | 1.51e-13 | 2 |
acinar cell of sebaceous gland | 1.51e-13 | 2 |
epidermal cell | 3.14e-11 | 9 |
endodermal cell | 5.09e-11 | 58 |
bronchial epithelial cell | 2.15e-09 | 3 |
smooth muscle cell of the coronary artery | 4.88e-09 | 3 |
embryonic cell | 3.28e-08 | 250 |
perirenal preadipocyte | 1.83e-07 | 1 |
general ecto-epithelial cell | 2.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 8.46e-13 | 2 |
neurofibroma | 8.46e-13 | 2 |
peripheral nervous system neoplasm | 7.91e-09 | 3 |