FFCP PHASE1:Hg19::chr17:4938712..4938733,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30225 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NWF4 | |||
|association_with_transcript=0bp_to_ENST00000254853,ENST00000424747,NM_001104577,NM_017986,uc002gao.3,uc002gap.3,uc010ckw.2_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_GPR172B_5end | |||
|id=chr17:4938712..4938733,- | |||
|ontology_enrichment_celltype=CL:0000066!1.47e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.01e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.65e-20,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.65e-08;1!UBERON:0009143;6.85e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.18e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;6.85e-08;1!DOID:178;6.85e-08;1!DOID:326;6.85e-08;1!DOID:3978;6.85e-08;1!DOID:3394;6.85e-08;1!DOID:5844;6.85e-08;1!DOID:6193;6.85e-08;1!DOID:3149;6.85e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,4.40e-08,1;DOID:326,4.40e-08,1;DOID:3978,4.40e-08,1;DOID:3394,4.40e-08,1;DOID:5844,4.40e-08,1;DOID:3151,5.40e-08,1;DOID:3149,5.40e-08,1;DOID:6193,7.59e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.72e-08!169;UBERON:0000925!1.72e-08!169;UBERON:0006595!1.72e-08!169;UBERON:0001007!9.03e-07!155;UBERON:0001555!9.03e-07!155;UBERON:0007026!9.03e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.01e-20;3!UBERON:0000920;3.01e-20;3!UBERON:0002108;3.93e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.65e-20,3;UBERON:0003124,2.02e-15,7;UBERON:0002108,3.86e-13,4;UBERON:0005631,8.78e-08,14;UBERON:0000158,8.78e-08,14 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.640456598628376,0.390178042679635,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0.184099797284599,0,0,0,0,0.193260853163297,0.545492241181669,0,0.853815942907168,0.265059536642971,0.813357600086629,1.14027160516907,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0.122988438543114,0,0.329250856225877,0,0.703702806881416,0.740707561268237,0,0,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.358234090811393,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.184161977871793,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,9.06760902499956,0,0,0,0.650060246036521,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,9.69681148000825,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,1.65471377237555,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0.697118721393016,0.307801034015188,0,0,0.0897576444097721,8.58314238183864,1.5950057986596,1.55715908783166,1.06606955203727,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,16.5415645621244,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0.978323094660449,0,0.394584402849391,4.83962864194656,0,0,0,0,0,0,0,0,0,0.138674673013139,1.90915712168644,0.0979923974143777,0.34823682632161,0,1.37588825977293,0,0,0,1.16386819786103,0,0,0,0,0.0633107959558787,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,1.67717343799633,0.0788057072991982,0.262272940674991,0.105600336519406,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0,0.171086837884329,0,0.427149650270779,0.157204305099666,0,0,1.97611631897944,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0.358177682162975,1.54400723580486,0.219284049578707,0.706756583783524,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0.279759015438889,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0,0,0,0,0.943757786781923,0,0,0,0,0,0.0752103283492573,0.60511520611056,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0,0,2.17196126987312,0.535701835878287,0.336283722218824,0,0,27.2316276399301,0,0,0.135939465953663,0,0.118193840883968,0,0.78493092850514,0,0.840816489941367,0.913158720509496,0.215927591218621,8.12177869407985,0,0,0.23248285073625,0,0,0.414432328326074,0.6828739083758,0.691259661814092,0,0,0.170426809518315,0.423387050190929,0.22910686854405,0,0,0.782988022584546,0,0.243835849964539,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,19.6794103175259,2.84127428655144,0,0,0,0,0,0,0,0.469919589899268,0.128915775947154,0,1.07132363163395,0.705789743431384,0,0,0,0,0.788857810965923,0.0679914901909147,0,4.2322147241232,0,0,0,0,0,0,0.815910637935854,0.534434810531121,0.551369397209069,1.25353769646188,0,0,0,0,0,0,0.322944549180031,0.620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.5388164241167,1.72133292942423,0.665320713092027,0.162806537221949,0.320182037633146,0,0,0,0.366724332548599,0.406896178315738,0,0.603821380773079,0.641136984606466 | |||
|short_description=p1@GPR172B | |||
}} |
Revision as of 13:19, 20 January 2014
Short description: | p1@GPR172B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR172B_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000254853, ENST00000424747, NM_001104577, NM_017986, uc002gao.3, uc002gap.3, uc010ckw.2_5end |
EntrezGene: | GPR172B |
HGNC: | 30225 |
UniProt: | Q9NWF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.65e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.65e-20 | 3 |
chorion | 2.02e-15 | 7 |
small intestine | 3.86e-13 | 4 |
extraembryonic membrane | 8.78e-08 | 14 |
membranous layer | 8.78e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.40e-08 | 1 |
ischemia | 4.40e-08 | 1 |
extrinsic cardiomyopathy | 4.40e-08 | 1 |
myocardial ischemia | 4.40e-08 | 1 |
myocardial infarction | 4.40e-08 | 1 |
skin squamous cell carcinoma | 5.40e-08 | 1 |
keratoacanthoma | 5.40e-08 | 1 |
epithelioid sarcoma | 7.59e-08 | 1 |